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The map label for this gene is carR

Identifier: 108759900

GI number: 108759900

Start: 5035512

End: 5036177

Strand: Direct

Name: carR

Synonym: MXAN_4089

Alternate gene names: 108759900

Gene position: 5035512-5036177 (Clockwise)

Preceding gene: 108762194

Following gene: 108763561

Centisome position: 55.09

GC content: 73.57

Gene sequence:

>666_bases
ATGAAGCCACCGATGGACCTGGACTCGTTGCTCACCCAGACGCCCGCGAAGGACAACGCCGCGCTGGAGCGCGTGCTCGC
CGCGGCCCGGGGTGAACTGGCGCTTCGTCGTCCGGTGCGGCGCTGGCGCACGCAGGCCGTCGGGTTGATGGCGGCGTCGG
CGGGACTGGGCCTGCTGGCGGCCGTGGTGCTGCTCGCGGTGGGCGCGGTCACCGGCCCCCTGCTCCTGGCGCGCGCGCCC
CTGCTGGCGATGCTGGTGGGAACCAGCGCGGTGTGCGCCTGGGGCGCGCTGTCTCCCAAGGGCCGCTGGATGCGCCGGCT
GGGCGTGGGGCTGGCGGTGGTCAGCGCGGCGGCCCTGGTGCTCGCCCGGGGCGCGCCGCACAGTCCCCCATCGTTCCCGG
GCTGGGTCTGCACCGTCAGTCACCTGGCCATCGGCGTGGTGCCGCTGGTGGTGGCGCTGTTCGCGCTGCGCGGGGCCTTC
TTCCAGCCGCTGCGCGCCGTGGTGGCGGGCCTGTCGGTGGGCTCGACGGGCGCGCTGCTCGGAGAGCTCGCCTGTGAGCA
GGACTGGCGGCACGTCCTCTCCCACCACCTGCTCGCATGGGTCGTCATCACCGTCGTACTGGTGGTCATCTCGAAGTCGC
TCAAACCCCGTTCCTACGCGCCATGA

Upstream 100 bases:

>100_bases
CGCTGCGGGGCATCAGCCCTGGCGCCGCGCGGCTGCGAGCGCACCGGGGCTACGAGAAGCTGCGCGAGCTGCTGGGCGAG
CTGGAGCTGGAGGTGGCGCG

Downstream 100 bases:

>100_bases
TCCAGGACCCCTCACTCATCATCTGCCATGACGTGGACGGCGCACCGGTGCGCATTGGCGCGAAGGTGAAGGTCGTTCCG
CACTCCGAGGACGGCACCAT

Product: carotenogenesis protein CarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKPPMDLDSLLTQTPAKDNAALERVLAAARGELALRRPVRRWRTQAVGLMAASAGLGLLAAVVLLAVGAVTGPLLLARAP
LLAMLVGTSAVCAWGALSPKGRWMRRLGVGLAVVSAAALVLARGAPHSPPSFPGWVCTVSHLAIGVVPLVVALFALRGAF
FQPLRAVVAGLSVGSTGALLGELACEQDWRHVLSHHLLAWVVITVVLVVISKSLKPRSYAP

Sequences:

>Translated_221_residues
MKPPMDLDSLLTQTPAKDNAALERVLAAARGELALRRPVRRWRTQAVGLMAASAGLGLLAAVVLLAVGAVTGPLLLARAP
LLAMLVGTSAVCAWGALSPKGRWMRRLGVGLAVVSAAALVLARGAPHSPPSFPGWVCTVSHLAIGVVPLVVALFALRGAF
FQPLRAVVAGLSVGSTGALLGELACEQDWRHVLSHHLLAWVVITVVLVVISKSLKPRSYAP
>Mature_221_residues
MKPPMDLDSLLTQTPAKDNAALERVLAAARGELALRRPVRRWRTQAVGLMAASAGLGLLAAVVLLAVGAVTGPLLLARAP
LLAMLVGTSAVCAWGALSPKGRWMRRLGVGLAVVSAAALVLARGAPHSPPSFPGWVCTVSHLAIGVVPLVVALFALRGAF
FQPLRAVVAGLSVGSTGALLGELACEQDWRHVLSHHLLAWVVITVVLVVISKSLKPRSYAP

Specific function: Negative regulator of the carotenoid synthesis regulon. It is probably inactivated by protoporphyrin IX in the presence of blue light. Inactivation of CarR leads to loss of negative control over the carotenogenesis protein CarQ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CARR_MYXXA (Q06910)

Other databases:

- EMBL:   X71062
- PIR:   S39878

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22995; Mature: 22995

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ac820fc)-; HASH(0x197820cc)-; HASH(0x1cfaae68)-; HASH(0x4081c304)-; HASH(0x1b8755d8)-; HASH(0x1a308d5c)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPMDLDSLLTQTPAKDNAALERVLAAARGELALRRPVRRWRTQAVGLMAASAGLGLLA
CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVLLAVGAVTGPLLLARAPLLAMLVGTSAVCAWGALSPKGRWMRRLGVGLAVVSAAALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LARGAPHSPPSFPGWVCTVSHLAIGVVPLVVALFALRGAFFQPLRAVVAGLSVGSTGALL
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GELACEQDWRHVLSHHLLAWVVITVVLVVISKSLKPRSYAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MKPPMDLDSLLTQTPAKDNAALERVLAAARGELALRRPVRRWRTQAVGLMAASAGLGLLA
CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVLLAVGAVTGPLLLARAPLLAMLVGTSAVCAWGALSPKGRWMRRLGVGLAVVSAAALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LARGAPHSPPSFPGWVCTVSHLAIGVVPLVVALFALRGAFFQPLRAVVAGLSVGSTGALL
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GELACEQDWRHVLSHHLLAWVVITVVLVVISKSLKPRSYAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934835