| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pheA [H]
Identifier: 108763520
GI number: 108763520
Start: 3772001
End: 3772822
Strand: Reverse
Name: pheA [H]
Synonym: MXAN_3220
Alternate gene names: 108763520
Gene position: 3772822-3772001 (Counterclockwise)
Preceding gene: 108760492
Following gene: 108762158
Centisome position: 41.28
GC content: 73.48
Gene sequence:
>822_bases ATGCCTGAGTCGCCGCGTCGCATCGCCTTCCAGGGCGAGCCTGGCGCCTACGGAGAAGAGGCCCTGCGCGCGCTGCATGG CGCCGACGTGGAGGCCGTCCCCTGCCTCACCTTCCGCGCCGTCTTCGAAGCCGTGGCCGAAGGCCGCGTGCACGGCGGCG TGGTGCCGGTGGAGAGCTCGCTGGGCGGGCCCGTGGCGGAGACGGTGGACCTGCTGCTGGAGCATGACGTGCCGGCGACG GGCGAGCTGTCCCTGCGCATCCGCCACTGCCTGCTGGCCCCACCGGGCCTGTCACTGGACGACGTCCAGCAGGCCCTCTC CCACCCGCAGGCCCTGGCGCAATGCGCGGGCTACCTGCGACGGCGGGGCATCTCACCGCTGCCGGAGGCGAACACCGCCA TCGCCGCGCGAAAGGTGGCGGAGGAGAAGCCTCCGCACACGGCCGCCATCGCCAGCCGCATGTCCGCGGACCTGTACGGG CTGGCCGTGCTGGAGGAAGGCGTGGAGGACTCGCCGGACAACTTCACGCGCTTCATCGCCCTGGGGACCGCGCCCGAACG GACGTGGACGCGGCGGAAAACGGCGCTGGCCTTCACCGTGGAGAACGGGCCGGGCGCGCTGTTCCGCGTGATGAGCGCCT TCTCCTCGCGCGGCCTCAACGTGGCGCGGCTGGAGTCCCGGCCGCAGCGCCGCGCCTGGGAGTACGTGTGGTGCCTGGAC GTGGACGGCGCGCTGGAGGACCCGCGGGTACGCGAGGCGGTGGCCGCGGCCCAGGCCGCCTGCGTCACCCTGCGGGTGCT CGGAAGCTACGGCGTGGTGTGA
Upstream 100 bases:
>100_bases CACGCCGCCTCCGCAGCGGTGACGGCGGCGCTCGACGACATCCGTCCGCTCACCTCGTCGCTGCGCGTGCTGGGGACGTA TGCGCGCGCGGAGTCGCCTC
Downstream 100 bases:
>100_bases GGCTCGCTCAGGCGCCGGTGGCCTGGAGCCCGTCGCCGCTCTGCACGGCCGTCTCGTACGCGGAGCGCACCAGTTGGACG TAGCGCTGCAGTGCGGGGAG
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPESPRRIAFQGEPGAYGEEALRALHGADVEAVPCLTFRAVFEAVAEGRVHGGVVPVESSLGGPVAETVDLLLEHDVPAT GELSLRIRHCLLAPPGLSLDDVQQALSHPQALAQCAGYLRRRGISPLPEANTAIAARKVAEEKPPHTAAIASRMSADLYG LAVLEEGVEDSPDNFTRFIALGTAPERTWTRRKTALAFTVENGPGALFRVMSAFSSRGLNVARLESRPQRRAWEYVWCLD VDGALEDPRVREAVAAAQAACVTLRVLGSYGVV
Sequences:
>Translated_273_residues MPESPRRIAFQGEPGAYGEEALRALHGADVEAVPCLTFRAVFEAVAEGRVHGGVVPVESSLGGPVAETVDLLLEHDVPAT GELSLRIRHCLLAPPGLSLDDVQQALSHPQALAQCAGYLRRRGISPLPEANTAIAARKVAEEKPPHTAAIASRMSADLYG LAVLEEGVEDSPDNFTRFIALGTAPERTWTRRKTALAFTVENGPGALFRVMSAFSSRGLNVARLESRPQRRAWEYVWCLD VDGALEDPRVREAVAAAQAACVTLRVLGSYGVV >Mature_272_residues PESPRRIAFQGEPGAYGEEALRALHGADVEAVPCLTFRAVFEAVAEGRVHGGVVPVESSLGGPVAETVDLLLEHDVPATG ELSLRIRHCLLAPPGLSLDDVQQALSHPQALAQCAGYLRRRGISPLPEANTAIAARKVAEEKPPHTAAIASRMSADLYGL AVLEEGVEDSPDNFTRFIALGTAPERTWTRRKTALAFTVENGPGALFRVMSAFSSRGLNVARLESRPQRRAWEYVWCLDV DGALEDPRVREAVAAAQAACVTLRVLGSYGVV
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=271, Percent_Identity=32.8413284132841, Blast_Score=137, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6324013, Length=306, Percent_Identity=25.4901960784314, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 29253; Mature: 29121
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00857 PREPHENATE_DEHYDR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESPRRIAFQGEPGAYGEEALRALHGADVEAVPCLTFRAVFEAVAEGRVHGGVVPVESS CCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC LGGPVAETVDLLLEHDVPATGELSLRIRHCLLAPPGLSLDDVQQALSHPQALAQCAGYLR CCCHHHHHHHHHHHCCCCCCCCHHEEEEEHEECCCCCCHHHHHHHHHCHHHHHHHHHHHH RRGISPLPEANTAIAARKVAEEKPPHTAAIASRMSADLYGLAVLEEGVEDSPDNFTRFIA HCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE LGTAPERTWTRRKTALAFTVENGPGALFRVMSAFSSRGLNVARLESRPQRRAWEYVWCLD ECCCCCHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCEEEHHHCCCHHCCEEEEEEEE VDGALEDPRVREAVAAAQAACVTLRVLGSYGVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PESPRRIAFQGEPGAYGEEALRALHGADVEAVPCLTFRAVFEAVAEGRVHGGVVPVESS CCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC LGGPVAETVDLLLEHDVPATGELSLRIRHCLLAPPGLSLDDVQQALSHPQALAQCAGYLR CCCHHHHHHHHHHHCCCCCCCCHHEEEEEHEECCCCCCHHHHHHHHHCHHHHHHHHHHHH RRGISPLPEANTAIAARKVAEEKPPHTAAIASRMSADLYGLAVLEEGVEDSPDNFTRFIA HCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE LGTAPERTWTRRKTALAFTVENGPGALFRVMSAFSSRGLNVARLESRPQRRAWEYVWCLD ECCCCCHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCEEEHHHCCCHHCCEEEEEEEE VDGALEDPRVREAVAAAQAACVTLRVLGSYGVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]