| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mug [H]
Identifier: 108763489
GI number: 108763489
Start: 2758541
End: 2759041
Strand: Reverse
Name: mug [H]
Synonym: MXAN_2371
Alternate gene names: 108763489
Gene position: 2759041-2758541 (Counterclockwise)
Preceding gene: 108763152
Following gene: 108762478
Centisome position: 30.19
GC content: 71.06
Gene sequence:
>501_bases ATGCCGGACGTCATCGCGCCCCGGCTGCGCGTGCTCTTCTGCGGCATCAACCCCAGCCTCTACTCCGCGGTGGTGGGCTA TCACTTCGCGCGGCCCGGCAATCGCTTCTGGCCCACGCTGCATGCCGCGGGCATCACTCCGCACACTTTCCAACCCACGG AGCAGGAGGCCTTGCTCGCGCTGGGCTACGGCATCACCAACGTGGTGGACCGCGCCACCGCCACCGCGGACCTGCTGAAC CCCGCCGAGCTGGCCCGGGGCGCGAAGGCGCTGGAAGCCAAGGTGGCGCGCTACCAGCCCCGCTTCCTCGCGGTGCTGGG CGTGAGCGCCTACCGCATCGCCTTTGGCCGTCCCAAGGCCGCGCTGGGCACGCAACCGGAGCGCCTGGGCGACACGCGCT TGTGGGTGCTGCCCAATCCCAGCGGGCTCAACGCGCACTACCAACTCGACGCGCTGGGCCGCCTTTTCGCCGAGCTGCGA CGCGCCGTGGAGCAGGGCTGA
Upstream 100 bases:
>100_bases TGGGGGGTTGCCTTCCCAGGTAGGCTCGCGAAGATGCGCCCCCATGACACCGCTCCGTCGCCCCTCGCGAGATGAGCTGG ACGCAGCCGCCGGTCGCACC
Downstream 100 bases:
>100_bases CGACTCCCGGTACGAGTTCGCGGTGCCTCGCGCACCGTGCCTTGACCCATGGGTGCGCCCGCATGCAACGCTGCCCGCCA GGTTCCCCCGGACCTGCATC
Product: G/U mismatch-specific DNA glycosylase
Products: NA
Alternate protein names: Double-strand-specific uracil glycosylase; Mismatch-specific uracil DNA-glycosylase; MUG [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPDVIAPRLRVLFCGINPSLYSAVVGYHFARPGNRFWPTLHAAGITPHTFQPTEQEALLALGYGITNVVDRATATADLLN PAELARGAKALEAKVARYQPRFLAVLGVSAYRIAFGRPKAALGTQPERLGDTRLWVLPNPSGLNAHYQLDALGRLFAELR RAVEQG
Sequences:
>Translated_166_residues MPDVIAPRLRVLFCGINPSLYSAVVGYHFARPGNRFWPTLHAAGITPHTFQPTEQEALLALGYGITNVVDRATATADLLN PAELARGAKALEAKVARYQPRFLAVLGVSAYRIAFGRPKAALGTQPERLGDTRLWVLPNPSGLNAHYQLDALGRLFAELR RAVEQG >Mature_165_residues PDVIAPRLRVLFCGINPSLYSAVVGYHFARPGNRFWPTLHAAGITPHTFQPTEQEALLALGYGITNVVDRATATADLLNP AELARGAKALEAKVARYQPRFLAVLGVSAYRIAFGRPKAALGTQPERLGDTRLWVLPNPSGLNAHYQLDALGRLFAELRR AVEQG
Specific function: Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone o
COG id: COG3663
COG function: function code L; G:T/U mismatch-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TDG/mug DNA glycosylase family [H]
Homologues:
Organism=Homo sapiens, GI59853162, Length=156, Percent_Identity=32.0512820512821, Blast_Score=84, Evalue=7e-17, Organism=Escherichia coli, GI1789449, Length=163, Percent_Identity=43.558282208589, Blast_Score=139, Evalue=1e-34, Organism=Drosophila melanogaster, GI21356805, Length=144, Percent_Identity=34.7222222222222, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015637 - InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: =3.2.2.28 [H]
Molecular weight: Translated: 18085; Mature: 17954
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVIAPRLRVLFCGINPSLYSAVVGYHFARPGNRFWPTLHAAGITPHTFQPTEQEALLA CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHH LGYGITNVVDRATATADLLNPAELARGAKALEAKVARYQPRFLAVLGVSAYRIAFGRPKA HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEECCCCCC ALGTQPERLGDTRLWVLPNPSGLNAHYQLDALGRLFAELRRAVEQG CCCCCHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDVIAPRLRVLFCGINPSLYSAVVGYHFARPGNRFWPTLHAAGITPHTFQPTEQEALLA CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHH LGYGITNVVDRATATADLLNPAELARGAKALEAKVARYQPRFLAVLGVSAYRIAFGRPKA HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEECCCCCC ALGTQPERLGDTRLWVLPNPSGLNAHYQLDALGRLFAELRRAVEQG CCCCCHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA