| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762478
Identifier: 108762478
GI number: 108762478
Start: 2757822
End: 2758382
Strand: Reverse
Name: 108762478
Synonym: MXAN_2370
Alternate gene names: NA
Gene position: 2758382-2757822 (Counterclockwise)
Preceding gene: 108763489
Following gene: 108757227
Centisome position: 30.18
GC content: 70.05
Gene sequence:
>561_bases ATGAACGTATCGCAGCTACTCCTGGAGCGCGGCTTCGAGACCGCGACAGTCTCGGAGGCCCTGGGCCAGGTAGGCGTCGC GCTCGACGTCGACCGCGTCTACATCTTCGAGAACGCCACCAGCCCCACGGGCGAGCTGCTGTGCAACCAGCGCTACGAGT GGACCGCGGCCGCGGCCTCCGCGCAGTTGGACAACCCCGAGCTCCAGAACGTCCCCTACTCGGAGGTCATGCCCTCCTGG GTCGCGCCGCTGTCGTCGGGCAAGGCCGTCCAGGGACCGCCCCGTGCCTTCCCGTCGCCCGCTCGGGAGCTGCTGGAGGC CCAGGACATCCGGTCACTGCTGGTCTGCCCCATCACCGTGGGCGGCGAGTGGTGGGGCTTCGTGGGCTTCGACGACTGCC GGACGGAGCGCAAGTGGCCGCCGACGGAGGTCTCCGTGCTCCAGGCCCTGTCCAACGCGCTCGCGGGCTCGCTCCGCCAT GCGCGACTGCGCAGCATGCTCTCCGGCGTGCAGTCCCAGTTGCGCACCATCATCCAGCGCTGCGAGACGACGGCGTCCTG A
Upstream 100 bases:
>100_bases CCGCATGCAACGCTGCCCGCCAGGTTCCCCCGGACCTGCATCGCAACAGGCGCCCCCACCTGGAGCAGACCCCATGGCCT CGAAGGCATTCGCAGCAATC
Downstream 100 bases:
>100_bases CGCGAGCGGCGTCCGCGAGGCCTCAGCGAAGGATGCCGGCCTCGCGGGCGAATCCGGCCACCACGGGCGCCACGTGCTCG AAGGCGGCGGCGTTGCAGGC
Product: GAF domain-containing protein
Products: NA
Alternate protein names: Multi-Sensor Signal Transduction Histidine Kinase; GAF Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator; GAF Domain Protein; Signal Transduction Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Sensory Box Histidine Kinase; PAS/PAC Sensor Protein; GAF Sensor Hybrid Histidine Kinase; Multisensor Signal Transduction Histidine Kinase; Multisensor Diguanylate Cyclase/Phophodiesterase; Two Component Signal Transduction Sensor; PAS Sensor Protein; EAL/GGDEF/PAS/PAC-Domain Containing Signaling Protein; Diguanylate Cyclase; Sensor Protein; Metal Dependent Phosphohydrolase; Gaf Domain Protein; Signal Transduction Protein; Signal Transduction Histidine Kinase-Like Protein; PAS Domain-Containing Protein; Sensory Box Sensor Histidine Kinase/Response Regulator; Signaling Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Hybrid Histidine Kinase; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNVSQLLLERGFETATVSEALGQVGVALDVDRVYIFENATSPTGELLCNQRYEWTAAAASAQLDNPELQNVPYSEVMPSW VAPLSSGKAVQGPPRAFPSPARELLEAQDIRSLLVCPITVGGEWWGFVGFDDCRTERKWPPTEVSVLQALSNALAGSLRH ARLRSMLSGVQSQLRTIIQRCETTAS
Sequences:
>Translated_186_residues MNVSQLLLERGFETATVSEALGQVGVALDVDRVYIFENATSPTGELLCNQRYEWTAAAASAQLDNPELQNVPYSEVMPSW VAPLSSGKAVQGPPRAFPSPARELLEAQDIRSLLVCPITVGGEWWGFVGFDDCRTERKWPPTEVSVLQALSNALAGSLRH ARLRSMLSGVQSQLRTIIQRCETTAS >Mature_186_residues MNVSQLLLERGFETATVSEALGQVGVALDVDRVYIFENATSPTGELLCNQRYEWTAAAASAQLDNPELQNVPYSEVMPSW VAPLSSGKAVQGPPRAFPSPARELLEAQDIRSLLVCPITVGGEWWGFVGFDDCRTERKWPPTEVSVLQALSNALAGSLRH ARLRSMLSGVQSQLRTIIQRCETTAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20318; Mature: 20318
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSQLLLERGFETATVSEALGQVGVALDVDRVYIFENATSPTGELLCNQRYEWTAAAAS CCHHHHHHHCCCCHHHHHHHHHHHCCEEECCEEEEEECCCCCHHHHHHCCCCCHHHHHHH AQLDNPELQNVPYSEVMPSWVAPLSSGKAVQGPPRAFPSPARELLEAQDIRSLLVCPITV HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEE GGEWWGFVGFDDCRTERKWPPTEVSVLQALSNALAGSLRHARLRSMLSGVQSQLRTIIQR CCCCEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CETTAS HHCCCC >Mature Secondary Structure MNVSQLLLERGFETATVSEALGQVGVALDVDRVYIFENATSPTGELLCNQRYEWTAAAAS CCHHHHHHHCCCCHHHHHHHHHHHCCEEECCEEEEEECCCCCHHHHHHCCCCCHHHHHHH AQLDNPELQNVPYSEVMPSWVAPLSSGKAVQGPPRAFPSPARELLEAQDIRSLLVCPITV HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEE GGEWWGFVGFDDCRTERKWPPTEVSVLQALSNALAGSLRHARLRSMLSGVQSQLRTIIQR CCCCEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CETTAS HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA