| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763303
Identifier: 108763303
GI number: 108763303
Start: 4612120
End: 4614267
Strand: Reverse
Name: 108763303
Synonym: MXAN_3837
Alternate gene names: NA
Gene position: 4614267-4612120 (Counterclockwise)
Preceding gene: 108763908
Following gene: 108760468
Centisome position: 50.49
GC content: 70.44
Gene sequence:
>2148_bases ATGGAGTTGCGCAAGCTCAAGGACAAGGCGTCCGAGGCATTCACCAAGGGACGCTTTTCCAAGGCGGCGGAGCTCTACGA GGACTACTGCCGGGCCGAGCCCAAGGACCATCAGTCACGCCTGCGCTCCGGGGATGCCTGGGTGAAGGCGGGGCAACGGG ACCGGGCCATCTCGGCGTATCAATCCGCCGCGGAAGGCTTCGCGCGCGAGGGGTTCCTTCCGCGCGCCATCGCCGCGAGC AAGCTCATCCTCGAGCTGGACCCCGCGCACCGTGGCGTGCAGCAGATGCTCGCGGACCTGTACGCGCGCCGGGGAACGCC CATGGGCGCACGTGCCCGGGGCCCGATGAGCAGCGCGTCGTCCGTGACGGTGAAGACGTCCTCCGAGCCTGCTGGGGCGT CGCGTCTGCCCGAGGCAGTGCGCGCGGCCGTCGCCGCCATTGATTTGGGGGAGAGGGGGGAGGGTGCTTCGCCAGCCCCG TTGGCGGCTGGTGGTCCCGCGGTGGACCTGTCTGCGGAGCTGCCTCCAGAGCTGTCGTTGTCCACCAACGCGTCCACGCG TGGCACCGAAGAAGTCGTCCACTCGGTCGAGGTAGGACTGGCGTCGGAAGAGGGGACCGCTGGCGTGGAGTTGACGCTGG ACGTGGAGCCCGTCGTGGCAGGGACGCTGGTGGACGACGCGTGTGGAACCGATTCGATGACGTCCGAATTGGCCACGTCT GTCGAGGCATCCACGATCGTGGCGGCCTCAATCCCGCCCGCGATGGCCCTCCGTGAGCCAGAAGCGCCGCCGCTCGCGAC CCGGATTCCCGCGGTTCAACCCGGAGGCGCGCGTCCGGCGACGAGTGCGTTGCCGCCAGGACTGGCACCGCGCGCGTCGC AGCGGCTGCCCGCGGTGGGCGCTGCTCGCGCGCCCGAACCCGCGCCGTCCGCACCGCCACGGTCCGTCTCGAACAGCGGC CGCTGGCAAGCCCTGTCGTCGCCCATCACCACGCAGGCAGCGCCCGCAGCTTCTGAAGCCGCGGCCGCCTCCGCGCCCCC AGGACTGCGGGCGCGCCGTGCCGACCCACCGGTCCCCGCGGGCGCCACCGCGCTCCCGGGCCACGACCTGTCACCCGCGC TGGGCGCCTCCTTCCGGACGGCGGCGAGTCCGTCCTCCTTCACCGAGTTGGAGCTGGAAGCCGACTCCCTGTTGCACGCG GTGGAGCTGGCCGCGCAGGCGGGCTTGGATCGGCAAGGCCTGGGGGCCACGTCCATCAGCGACGGCCTCGAGGAGGAGCT CTACAGCCTGACGGAGGAGGTCCCTCCCGACGCGGGTTCCCTGGACGCGCTGCCCACGATTCCGCTCTTCTCGGACCTGC CTCGCGACGCCTTCATCGAGCTGTTCGAGCGCTGCCCGCTGCGGCGCTTCGGCCCGGACGAGCGAATCATCGACCAGGGC AGCCACGGCGATGCTTTCTACGTCATCTGCGAGGGCGCGGTGCGCGTCTTCCGGACGGAGGAGGGCCAGCGCCAGGACAT CGCGACGCTCGAAGGAGGCACCTTCTTCGGAGAGATGGCCCTGCTGTCCGGCGCGGCGCGCACGGCCTCGGTGGAGTCCG CGTCCGACGACACCCAGCTCCTGGAGATCTCCGCCAGCGTGCTCGCCGAGCTCTCGGGAAGCCACCCGCAGGTGGCCCAG GCCCTGAAGAAGTTCTGCCGTCAGCGCATGCTGACGAACGTGATGAACACGTCGGAGCTGTTCCGCCTCTTCGGGCGAAA GGACCGGCGCGCGCTCGTGGAGCGCTTCCGCTCCCGGGACGTGGAGCGTGACACCGTCATCATCCGTGACGGCGACCCGA CGGACGGCCTCTATGTGGTCCTGTCCGGCGAGGTGGAGGTGCGCAAGGACGGCCACCTGCTGACGCAGCTCCGGGAAGGG GACGTGTTCGGAGAGATTTCCCTGCTCCAGAAGACGCCTGCCACCGCGACCGTCACCGCCACCCGGCACACCACGCTGCT GCGGTTGCCGCGCGCCGACTTCGACGCGCTCATCTCCAGCCACCCGCAAATCCTGGCCCTGATCTCCGACCTGAGCGACG AACGGCTCCGGCGCACGCAGCGCGTGCTGACCGAAGCCGGCGTCGAGGAAGACCTCATCCTCGTCTGA
Upstream 100 bases:
>100_bases ACCAGTTGGAGGCCCTCAAGGCGGACTACTTCCGGACGGTGCGTGAGGCCGCGGGCGCGGCACCGGCGTCCGCGAGCACC GCGTCGGAGGGCGCTCCCTG
Downstream 100 bases:
>100_bases CGTCAGCGCACCTTGGCGAGGTAGTCGTCTCGCGTCACCAGGCCGCGCGTCTCCAGGAGCTCCAGCATGGCCCGCAGCGA GCGGGCCTGCTGGGCCACCA
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: MscS Mechanosensitive Ion Channel; CAMP-Dependent Protein Kinase
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MELRKLKDKASEAFTKGRFSKAAELYEDYCRAEPKDHQSRLRSGDAWVKAGQRDRAISAYQSAAEGFAREGFLPRAIAAS KLILELDPAHRGVQQMLADLYARRGTPMGARARGPMSSASSVTVKTSSEPAGASRLPEAVRAAVAAIDLGERGEGASPAP LAAGGPAVDLSAELPPELSLSTNASTRGTEEVVHSVEVGLASEEGTAGVELTLDVEPVVAGTLVDDACGTDSMTSELATS VEASTIVAASIPPAMALREPEAPPLATRIPAVQPGGARPATSALPPGLAPRASQRLPAVGAARAPEPAPSAPPRSVSNSG RWQALSSPITTQAAPAASEAAAASAPPGLRARRADPPVPAGATALPGHDLSPALGASFRTAASPSSFTELELEADSLLHA VELAAQAGLDRQGLGATSISDGLEEELYSLTEEVPPDAGSLDALPTIPLFSDLPRDAFIELFERCPLRRFGPDERIIDQG SHGDAFYVICEGAVRVFRTEEGQRQDIATLEGGTFFGEMALLSGAARTASVESASDDTQLLEISASVLAELSGSHPQVAQ ALKKFCRQRMLTNVMNTSELFRLFGRKDRRALVERFRSRDVERDTVIIRDGDPTDGLYVVLSGEVEVRKDGHLLTQLREG DVFGEISLLQKTPATATVTATRHTTLLRLPRADFDALISSHPQILALISDLSDERLRRTQRVLTEAGVEEDLILV
Sequences:
>Translated_715_residues MELRKLKDKASEAFTKGRFSKAAELYEDYCRAEPKDHQSRLRSGDAWVKAGQRDRAISAYQSAAEGFAREGFLPRAIAAS KLILELDPAHRGVQQMLADLYARRGTPMGARARGPMSSASSVTVKTSSEPAGASRLPEAVRAAVAAIDLGERGEGASPAP LAAGGPAVDLSAELPPELSLSTNASTRGTEEVVHSVEVGLASEEGTAGVELTLDVEPVVAGTLVDDACGTDSMTSELATS VEASTIVAASIPPAMALREPEAPPLATRIPAVQPGGARPATSALPPGLAPRASQRLPAVGAARAPEPAPSAPPRSVSNSG RWQALSSPITTQAAPAASEAAAASAPPGLRARRADPPVPAGATALPGHDLSPALGASFRTAASPSSFTELELEADSLLHA VELAAQAGLDRQGLGATSISDGLEEELYSLTEEVPPDAGSLDALPTIPLFSDLPRDAFIELFERCPLRRFGPDERIIDQG SHGDAFYVICEGAVRVFRTEEGQRQDIATLEGGTFFGEMALLSGAARTASVESASDDTQLLEISASVLAELSGSHPQVAQ ALKKFCRQRMLTNVMNTSELFRLFGRKDRRALVERFRSRDVERDTVIIRDGDPTDGLYVVLSGEVEVRKDGHLLTQLREG DVFGEISLLQKTPATATVTATRHTTLLRLPRADFDALISSHPQILALISDLSDERLRRTQRVLTEAGVEEDLILV >Mature_715_residues MELRKLKDKASEAFTKGRFSKAAELYEDYCRAEPKDHQSRLRSGDAWVKAGQRDRAISAYQSAAEGFAREGFLPRAIAAS KLILELDPAHRGVQQMLADLYARRGTPMGARARGPMSSASSVTVKTSSEPAGASRLPEAVRAAVAAIDLGERGEGASPAP LAAGGPAVDLSAELPPELSLSTNASTRGTEEVVHSVEVGLASEEGTAGVELTLDVEPVVAGTLVDDACGTDSMTSELATS VEASTIVAASIPPAMALREPEAPPLATRIPAVQPGGARPATSALPPGLAPRASQRLPAVGAARAPEPAPSAPPRSVSNSG RWQALSSPITTQAAPAASEAAAASAPPGLRARRADPPVPAGATALPGHDLSPALGASFRTAASPSSFTELELEADSLLHA VELAAQAGLDRQGLGATSISDGLEEELYSLTEEVPPDAGSLDALPTIPLFSDLPRDAFIELFERCPLRRFGPDERIIDQG SHGDAFYVICEGAVRVFRTEEGQRQDIATLEGGTFFGEMALLSGAARTASVESASDDTQLLEISASVLAELSGSHPQVAQ ALKKFCRQRMLTNVMNTSELFRLFGRKDRRALVERFRSRDVERDTVIIRDGDPTDGLYVVLSGEVEVRKDGHLLTQLREG DVFGEISLLQKTPATATVTATRHTTLLRLPRADFDALISSHPQILALISDLSDERLRRTQRVLTEAGVEEDLILV
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4758958, Length=249, Percent_Identity=24.8995983935743, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI47132583, Length=286, Percent_Identity=27.6223776223776, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI47132581, Length=286, Percent_Identity=27.6223776223776, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI4506063, Length=286, Percent_Identity=27.6223776223776, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI258613977, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI258613975, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI258613973, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI258613971, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI258613969, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI38257139, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71994934, Length=218, Percent_Identity=28.8990825688073, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115534999, Length=218, Percent_Identity=28.8990825688073, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI133901990, Length=218, Percent_Identity=28.8990825688073, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25145047, Length=269, Percent_Identity=28.996282527881, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17539610, Length=269, Percent_Identity=28.996282527881, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17539608, Length=269, Percent_Identity=28.996282527881, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71989393, Length=269, Percent_Identity=28.996282527881, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322156, Length=213, Percent_Identity=28.6384976525822, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI161076492, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI28573932, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI28573930, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI17647815, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI161076490, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI24667745, Length=287, Percent_Identity=27.5261324041812, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI62472332, Length=287, Percent_Identity=27.5261324041812, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI62472322, Length=287, Percent_Identity=27.5261324041812, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI28574658, Length=287, Percent_Identity=27.5261324041812, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI221513359, Length=287, Percent_Identity=27.5261324041812, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI62472300, Length=290, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI62472310, Length=290, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI28574654, Length=290, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI28574656, Length=290, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI62472279, Length=290, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI62472291, Length=290, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75485; Mature: 75485
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3 ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRKLKDKASEAFTKGRFSKAAELYEDYCRAEPKDHQSRLRSGDAWVKAGQRDRAISAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCHHHHHHH QSAAEGFAREGFLPRAIAASKLILELDPAHRGVQQMLADLYARRGTPMGARARGPMSSAS HHHHHHHHHCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SVTVKTSSEPAGASRLPEAVRAAVAAIDLGERGEGASPAPLAAGGPAVDLSAELPPELSL EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEE STNASTRGTEEVVHSVEVGLASEEGTAGVELTLDVEPVVAGTLVDDACGTDSMTSELATS CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEHHHHHCCCCCCHHHHHHHHH VEASTIVAASIPPAMALREPEAPPLATRIPAVQPGGARPATSALPPGLAPRASQRLPAVG HHHHEEEEECCCCHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC AARAPEPAPSAPPRSVSNSGRWQALSSPITTQAAPAASEAAAASAPPGLRARRADPPVPA CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC GATALPGHDLSPALGASFRTAASPSSFTELELEADSLLHAVELAAQAGLDRQGLGATSIS CCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHH DGLEEELYSLTEEVPPDAGSLDALPTIPLFSDLPRDAFIELFERCPLRRFGPDERIIDQG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHCCC SHGDAFYVICEGAVRVFRTEEGQRQDIATLEGGTFFGEMALLSGAARTASVESASDDTQL CCCCEEEEEECCCHHEEECCCCCCCCCEEECCCCHHHHHHHHHCCHHHCCCCCCCCCHHH LEISASVLAELSGSHPQVAQALKKFCRQRMLTNVMNTSELFRLFGRKDRRALVERFRSRD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VERDTVIIRDGDPTDGLYVVLSGEVEVRKDGHLLTQLREGDVFGEISLLQKTPATATVTA CCCCEEEEECCCCCCCEEEEEECCEEEECCCHHHHHHHCCCCCEEHHHHHCCCCCEEEEE TRHTTLLRLPRADFDALISSHPQILALISDLSDERLRRTQRVLTEAGVEEDLILV CCCEEEEECCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEC >Mature Secondary Structure MELRKLKDKASEAFTKGRFSKAAELYEDYCRAEPKDHQSRLRSGDAWVKAGQRDRAISAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCHHHHHHH QSAAEGFAREGFLPRAIAASKLILELDPAHRGVQQMLADLYARRGTPMGARARGPMSSAS HHHHHHHHHCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SVTVKTSSEPAGASRLPEAVRAAVAAIDLGERGEGASPAPLAAGGPAVDLSAELPPELSL EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEE STNASTRGTEEVVHSVEVGLASEEGTAGVELTLDVEPVVAGTLVDDACGTDSMTSELATS CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEHHHHHCCCCCCHHHHHHHHH VEASTIVAASIPPAMALREPEAPPLATRIPAVQPGGARPATSALPPGLAPRASQRLPAVG HHHHEEEEECCCCHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC AARAPEPAPSAPPRSVSNSGRWQALSSPITTQAAPAASEAAAASAPPGLRARRADPPVPA CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC GATALPGHDLSPALGASFRTAASPSSFTELELEADSLLHAVELAAQAGLDRQGLGATSIS CCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHH DGLEEELYSLTEEVPPDAGSLDALPTIPLFSDLPRDAFIELFERCPLRRFGPDERIIDQG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHCCC SHGDAFYVICEGAVRVFRTEEGQRQDIATLEGGTFFGEMALLSGAARTASVESASDDTQL CCCCEEEEEECCCHHEEECCCCCCCCCEEECCCCHHHHHHHHHCCHHHCCCCCCCCCHHH LEISASVLAELSGSHPQVAQALKKFCRQRMLTNVMNTSELFRLFGRKDRRALVERFRSRD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VERDTVIIRDGDPTDGLYVVLSGEVEVRKDGHLLTQLREGDVFGEISLLQKTPATATVTA CCCCEEEEECCCCCCCEEEEEECCEEEECCCHHHHHHHCCCCCEEHHHHHCCCCCEEEEE TRHTTLLRLPRADFDALISSHPQILALISDLSDERLRRTQRVLTEAGVEEDLILV CCCEEEEECCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA