Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108763908

Identifier: 108763908

GI number: 108763908

Start: 4614267

End: 4616387

Strand: Reverse

Name: 108763908

Synonym: MXAN_3838

Alternate gene names: NA

Gene position: 4616387-4614267 (Counterclockwise)

Preceding gene: 108759403

Following gene: 108763303

Centisome position: 50.51

GC content: 72.65

Gene sequence:

>2121_bases
ATGCGAACCGGCGCGCGCCCCCTCATTCTCGCACTTGCCCTGCTTCTCGGCTGCAACGGCAGCAGGGACCAGCTTCTCGC
GGACCTCCAGAGTCCTCGTCCGGAGGTCCGCGCTCTCGCGGTGAAGAAGCTGGCCGGGCAGGGCAACCCGGATGACCTCG
TCCTCTTCACCCGCGCGGCGAAGGACTTCGCCGCCATCGTCCGGGCCGAGGCCGCCGTGGCGCTGGGAGAGAGCCAGGAC
GCCCGCGTCGTGGACCTCCTGGGCGAACTGCTCGAGGACCAGGACGAAGAGGTCCAGGGCCGCGCCGCCATGGCGCTGTC
CAAGGTGAACAACGAAAAGGCCAAGGCGTACCTCACGCTCCAGTACGGACGGCGGGGCCGGGCCACGCGTCAGGTCATCG
TCCAGGCCCTGAAGAACGCCAACGTTCCGGGGGCCATGGCGGAGGTGGTCGCCGCTGAGGCCCGCTCCCAGTGGGACCGC
AACCAGCTCGCGCTGACCGAAGGCGCGCTGCCCGAGCGCGTGGGCGCCGCCGAGGAGCTGGGCAAGAGCGGCCGTCCCGA
CGCCGTCAACCGGCTGCTGCCCTTGGTTCGCGACAGCCAGGTCATCCTCGCCGCCGCCGCCGTGCGCGGGCTGGGTGACG
CCGGCGACAAGCGCGCGGTGAGCCCCATCGCGTTGCTGTTGGAGGAGAACTTCCCGGAACTGCGCGAGTCCGCCATCCAC
GCGCTGATGAAGCTTCAGGATCCGGTGGCCACGCAGCGCCTCCAGTTGGTGGCGGTGGAGAAGAGCGCCGTCAGTCCGCT
GGCCATCGACGCCATCGTGTCCTTCCCCCGGACGCCGCAGACGGATGCTTCGCTGTGCGCCATCGTCATGGAGGGCGCAC
CGGCGGAGGCGCTCGTCGCGGGCCGGAGCATGCGCACACGCGGCGGCTGTTCGGTGGACACCATTGGCGAGCGGCTGGCA
CGTCCGGCCACGGCCGCCAGTGGCCTCCAGGCCGTCGAGGGGCTGGGACCCGCGGCGCTGCCGCTGCTCGGCAAGGTGGT
GCCGTGGCTGAGCCATTCGGACGCCACGCTGCGCCTGCTCGCGGTGGAGGCCGTGGCGGAGGTGGGGGATGCCTCCGTGG
TGCCCGCGTTGCAGAAGCTCTACGAGCAGGAGGTCAAGGGACTGGAGGCGCTGCGCGCCGACTGGGTGACCCAAGCGCTC
CCGGAGAAGTTCGGCGTGGGGTTCGACCCTTCGACCATGCCGCCCACCCCGTCGACACCTGGCCTGAAGGATGAGCGGCC
GTCGCGGCACGCGGACCTGCTGGGGCGGGTGAAGGAGCTCAATGCCGCCCGGGTGCGTGAGTCCGGGCGGGACGTGGTGC
GGCACCGTGTGCCCACCGAGCTGTATGACGACGTGGCGCCGGAGCGGCTGGTGCCGCTGGCGACGCTGCTGCGCGCGTTG
GGGGCGCTGAAGGCGCCCGGCGCCCTGGAACTGCTCACCGGCTACACCCAGGACTCCAGCGCCGCGCTGCGCGTGGCGGC
CCTGGTGGGGCTGGCGCGGCTGGGCCCCGAGGGCGTCAACGTGGCCAAGGCCGGGCTCGTCGAGCCGGACCGCGACCTGC
AGAAGGCCCTGGCCCAAGTGCTGGCGGAGGCCGGCGAGGCGGGGCAGGCCGCGCTCATCGAGATGCTGCCGAAGATGGGG
AGCGAGAAGCTGCTGGTGTTGGATGCGCTCACGCGCGCCGGCGCCGTGCCGGGCTCCGCTTCCACGCAGCTCCAGGCCGT
GGTGCGCGAAGGTGGACCGGAAGCGGCGCTCGCGGCGGCCCTGCTGGGACGGATTCAGGCGAAGGACGCCGTGCCCACGC
TGGTGAAGGCGCTGGACGAGCCCAACAGCGTGGCCCGCCGCGACGTGCTGCTGGCGCTGGGGAGCATCGGCGACGCGCAG
GCGGCGGACGCGGTGGCCAAGGACCTGTTCCACGACCTGCCCGAGATTCGCGCCGCGGCGGCTTCGTCGCTCCGGAAGCT
GGGCAGCGCCGCGCATGCGGACCAGTTGGAGGCCCTCAAGGCGGACTACTTCCGGACGGTGCGTGAGGCCGCGGGCGCGG
CACCGGCGTCCGCGAGCACCGCGTCGGAGGGCGCTCCCTGA

Upstream 100 bases:

>100_bases
CCCGGGGGCCTCGCCGTCCGCGTTGATACATGACGCGGTGGATTGGGCGGGAATCGAGGGGGATTGATATAACGGGCGCC
AACTCCTACACCGGAGACCG

Downstream 100 bases:

>100_bases
TGGAGTTGCGCAAGCTCAAGGACAAGGCGTCCGAGGCATTCACCAAGGGACGCTTTTCCAAGGCGGCGGAGCTCTACGAG
GACTACTGCCGGGCCGAGCC

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: Pbs Lyase Heat-Like Repeat Protein

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAAKDFAAIVRAEAAVALGESQD
ARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTLQYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDR
NQLALTEGALPERVGAAEELGKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH
ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVAGRSMRTRGGCSVDTIGERLA
RPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLLAVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQAL
PEKFGVGFDPSTMPPTPSTPGLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL
GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQVLAEAGEAGQAALIEMLPKMG
SEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAALLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQ
AADAVAKDLFHDLPEIRAAAASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP

Sequences:

>Translated_706_residues
MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAAKDFAAIVRAEAAVALGESQD
ARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTLQYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDR
NQLALTEGALPERVGAAEELGKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH
ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVAGRSMRTRGGCSVDTIGERLA
RPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLLAVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQAL
PEKFGVGFDPSTMPPTPSTPGLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL
GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQVLAEAGEAGQAALIEMLPKMG
SEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAALLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQ
AADAVAKDLFHDLPEIRAAAASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP
>Mature_706_residues
MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAAKDFAAIVRAEAAVALGESQD
ARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTLQYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDR
NQLALTEGALPERVGAAEELGKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH
ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVAGRSMRTRGGCSVDTIGERLA
RPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLLAVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQAL
PEKFGVGFDPSTMPPTPSTPGLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL
GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQVLAEAGEAGQAALIEMLPKMG
SEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAALLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQ
AADAVAKDLFHDLPEIRAAAASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73683; Mature: 73683

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHH
KDFAAIVRAEAAVALGESQDARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEEEEE
QYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDRNQLALTEGALPERVGAAEEL
ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCHHHH
GKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVA
HHHHHHCHHHHHHHHHEEEHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH
GRSMRTRGGCSVDTIGERLARPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLL
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
AVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQALPEKFGVGFDPSTMPPTPSTP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQV
HHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHH
LAEAGEAGQAALIEMLPKMGSEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAA
HHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH
LLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQAADAVAKDLFHDLPEIRAAA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHH
KDFAAIVRAEAAVALGESQDARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEEEEE
QYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDRNQLALTEGALPERVGAAEEL
ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCHHHH
GKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVA
HHHHHHCHHHHHHHHHEEEHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH
GRSMRTRGGCSVDTIGERLARPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLL
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
AVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQALPEKFGVGFDPSTMPPTPSTP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQV
HHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHH
LAEAGEAGQAALIEMLPKMGSEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAA
HHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH
LLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQAADAVAKDLFHDLPEIRAAA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA