| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763908
Identifier: 108763908
GI number: 108763908
Start: 4614267
End: 4616387
Strand: Reverse
Name: 108763908
Synonym: MXAN_3838
Alternate gene names: NA
Gene position: 4616387-4614267 (Counterclockwise)
Preceding gene: 108759403
Following gene: 108763303
Centisome position: 50.51
GC content: 72.65
Gene sequence:
>2121_bases ATGCGAACCGGCGCGCGCCCCCTCATTCTCGCACTTGCCCTGCTTCTCGGCTGCAACGGCAGCAGGGACCAGCTTCTCGC GGACCTCCAGAGTCCTCGTCCGGAGGTCCGCGCTCTCGCGGTGAAGAAGCTGGCCGGGCAGGGCAACCCGGATGACCTCG TCCTCTTCACCCGCGCGGCGAAGGACTTCGCCGCCATCGTCCGGGCCGAGGCCGCCGTGGCGCTGGGAGAGAGCCAGGAC GCCCGCGTCGTGGACCTCCTGGGCGAACTGCTCGAGGACCAGGACGAAGAGGTCCAGGGCCGCGCCGCCATGGCGCTGTC CAAGGTGAACAACGAAAAGGCCAAGGCGTACCTCACGCTCCAGTACGGACGGCGGGGCCGGGCCACGCGTCAGGTCATCG TCCAGGCCCTGAAGAACGCCAACGTTCCGGGGGCCATGGCGGAGGTGGTCGCCGCTGAGGCCCGCTCCCAGTGGGACCGC AACCAGCTCGCGCTGACCGAAGGCGCGCTGCCCGAGCGCGTGGGCGCCGCCGAGGAGCTGGGCAAGAGCGGCCGTCCCGA CGCCGTCAACCGGCTGCTGCCCTTGGTTCGCGACAGCCAGGTCATCCTCGCCGCCGCCGCCGTGCGCGGGCTGGGTGACG CCGGCGACAAGCGCGCGGTGAGCCCCATCGCGTTGCTGTTGGAGGAGAACTTCCCGGAACTGCGCGAGTCCGCCATCCAC GCGCTGATGAAGCTTCAGGATCCGGTGGCCACGCAGCGCCTCCAGTTGGTGGCGGTGGAGAAGAGCGCCGTCAGTCCGCT GGCCATCGACGCCATCGTGTCCTTCCCCCGGACGCCGCAGACGGATGCTTCGCTGTGCGCCATCGTCATGGAGGGCGCAC CGGCGGAGGCGCTCGTCGCGGGCCGGAGCATGCGCACACGCGGCGGCTGTTCGGTGGACACCATTGGCGAGCGGCTGGCA CGTCCGGCCACGGCCGCCAGTGGCCTCCAGGCCGTCGAGGGGCTGGGACCCGCGGCGCTGCCGCTGCTCGGCAAGGTGGT GCCGTGGCTGAGCCATTCGGACGCCACGCTGCGCCTGCTCGCGGTGGAGGCCGTGGCGGAGGTGGGGGATGCCTCCGTGG TGCCCGCGTTGCAGAAGCTCTACGAGCAGGAGGTCAAGGGACTGGAGGCGCTGCGCGCCGACTGGGTGACCCAAGCGCTC CCGGAGAAGTTCGGCGTGGGGTTCGACCCTTCGACCATGCCGCCCACCCCGTCGACACCTGGCCTGAAGGATGAGCGGCC GTCGCGGCACGCGGACCTGCTGGGGCGGGTGAAGGAGCTCAATGCCGCCCGGGTGCGTGAGTCCGGGCGGGACGTGGTGC GGCACCGTGTGCCCACCGAGCTGTATGACGACGTGGCGCCGGAGCGGCTGGTGCCGCTGGCGACGCTGCTGCGCGCGTTG GGGGCGCTGAAGGCGCCCGGCGCCCTGGAACTGCTCACCGGCTACACCCAGGACTCCAGCGCCGCGCTGCGCGTGGCGGC CCTGGTGGGGCTGGCGCGGCTGGGCCCCGAGGGCGTCAACGTGGCCAAGGCCGGGCTCGTCGAGCCGGACCGCGACCTGC AGAAGGCCCTGGCCCAAGTGCTGGCGGAGGCCGGCGAGGCGGGGCAGGCCGCGCTCATCGAGATGCTGCCGAAGATGGGG AGCGAGAAGCTGCTGGTGTTGGATGCGCTCACGCGCGCCGGCGCCGTGCCGGGCTCCGCTTCCACGCAGCTCCAGGCCGT GGTGCGCGAAGGTGGACCGGAAGCGGCGCTCGCGGCGGCCCTGCTGGGACGGATTCAGGCGAAGGACGCCGTGCCCACGC TGGTGAAGGCGCTGGACGAGCCCAACAGCGTGGCCCGCCGCGACGTGCTGCTGGCGCTGGGGAGCATCGGCGACGCGCAG GCGGCGGACGCGGTGGCCAAGGACCTGTTCCACGACCTGCCCGAGATTCGCGCCGCGGCGGCTTCGTCGCTCCGGAAGCT GGGCAGCGCCGCGCATGCGGACCAGTTGGAGGCCCTCAAGGCGGACTACTTCCGGACGGTGCGTGAGGCCGCGGGCGCGG CACCGGCGTCCGCGAGCACCGCGTCGGAGGGCGCTCCCTGA
Upstream 100 bases:
>100_bases CCCGGGGGCCTCGCCGTCCGCGTTGATACATGACGCGGTGGATTGGGCGGGAATCGAGGGGGATTGATATAACGGGCGCC AACTCCTACACCGGAGACCG
Downstream 100 bases:
>100_bases TGGAGTTGCGCAAGCTCAAGGACAAGGCGTCCGAGGCATTCACCAAGGGACGCTTTTCCAAGGCGGCGGAGCTCTACGAG GACTACTGCCGGGCCGAGCC
Product: HEAT repeat-containing PBS lyase
Products: NA
Alternate protein names: Pbs Lyase Heat-Like Repeat Protein
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAAKDFAAIVRAEAAVALGESQD ARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTLQYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDR NQLALTEGALPERVGAAEELGKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVAGRSMRTRGGCSVDTIGERLA RPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLLAVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQAL PEKFGVGFDPSTMPPTPSTPGLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQVLAEAGEAGQAALIEMLPKMG SEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAALLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQ AADAVAKDLFHDLPEIRAAAASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP
Sequences:
>Translated_706_residues MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAAKDFAAIVRAEAAVALGESQD ARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTLQYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDR NQLALTEGALPERVGAAEELGKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVAGRSMRTRGGCSVDTIGERLA RPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLLAVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQAL PEKFGVGFDPSTMPPTPSTPGLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQVLAEAGEAGQAALIEMLPKMG SEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAALLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQ AADAVAKDLFHDLPEIRAAAASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP >Mature_706_residues MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAAKDFAAIVRAEAAVALGESQD ARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTLQYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDR NQLALTEGALPERVGAAEELGKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVAGRSMRTRGGCSVDTIGERLA RPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLLAVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQAL PEKFGVGFDPSTMPPTPSTPGLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQVLAEAGEAGQAALIEMLPKMG SEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAALLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQ AADAVAKDLFHDLPEIRAAAASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73683; Mature: 73683
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAA CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHH KDFAAIVRAEAAVALGESQDARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEEEEE QYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDRNQLALTEGALPERVGAAEEL ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCHHHH GKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVA HHHHHHCHHHHHHHHHEEEHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH GRSMRTRGGCSVDTIGERLARPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLL CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH AVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQALPEKFGVGFDPSTMPPTPSTP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQV HHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHH LAEAGEAGQAALIEMLPKMGSEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAA HHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH LLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQAADAVAKDLFHDLPEIRAAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRTGARPLILALALLLGCNGSRDQLLADLQSPRPEVRALAVKKLAGQGNPDDLVLFTRAA CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHH KDFAAIVRAEAAVALGESQDARVVDLLGELLEDQDEEVQGRAAMALSKVNNEKAKAYLTL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEEEEE QYGRRGRATRQVIVQALKNANVPGAMAEVVAAEARSQWDRNQLALTEGALPERVGAAEEL ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCHHHH GKSGRPDAVNRLLPLVRDSQVILAAAAVRGLGDAGDKRAVSPIALLLEENFPELRESAIH CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH ALMKLQDPVATQRLQLVAVEKSAVSPLAIDAIVSFPRTPQTDASLCAIVMEGAPAEALVA HHHHHHCHHHHHHHHHEEEHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH GRSMRTRGGCSVDTIGERLARPATAASGLQAVEGLGPAALPLLGKVVPWLSHSDATLRLL CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH AVEAVAEVGDASVVPALQKLYEQEVKGLEALRADWVTQALPEKFGVGFDPSTMPPTPSTP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GLKDERPSRHADLLGRVKELNAARVRESGRDVVRHRVPTELYDDVAPERLVPLATLLRAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH GALKAPGALELLTGYTQDSSAALRVAALVGLARLGPEGVNVAKAGLVEPDRDLQKALAQV HHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHH LAEAGEAGQAALIEMLPKMGSEKLLVLDALTRAGAVPGSASTQLQAVVREGGPEAALAAA HHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH LLGRIQAKDAVPTLVKALDEPNSVARRDVLLALGSIGDAQAADAVAKDLFHDLPEIRAAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ASSLRKLGSAAHADQLEALKADYFRTVREAAGAAPASASTASEGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA