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The map label for this gene is dedA [C]

Identifier: 108763176

GI number: 108763176

Start: 382003

End: 382617

Strand: Reverse

Name: dedA [C]

Synonym: MXAN_0324

Alternate gene names: 108763176

Gene position: 382617-382003 (Counterclockwise)

Preceding gene: 108763169

Following gene: 108762866

Centisome position: 4.19

GC content: 71.38

Gene sequence:

>615_bases
ATGGCCGCGGGTCCACTCCCATGGCTGCTGACCCATGGCACAGCGGCCCTGCTCTTCGCCGCCCTGGTCGCCGGAGGCTT
GGGGGTACCCATTCCAGAGGACCTGGTGCTGTTGTCGCTGGGCATCCTCGCGCACCAGGACGTCCTCCCCATCGCCCTGG
CGGTCGCGGTCGCAATCACCGGAGTGCTCTGCGGCGACACGGCCCTCTTCATCACCGCCCAAAGGCTGGGGCCCGCGCTG
TACGCGCATCCACGGATGAAGAAGCTCCTGCCGCCGGAACGCCGCGAGCGACTGGCCCAGCTCTACGCGCGCCACGGCGG
GCGCTGCATCTTCGTGGGACGCTTTCTCTCGGTCCTGCGCGGGGCAGTGTTCATCATGGCCGCGGTGCAAGGGATGCGGC
TGCGCGACTTCCTGCTGTGGGACGCGTTGGCGCTATGCCTCAGCGCTCCGGTGGTGGTGGCGCTGGGGTACGCCTTCTCG
CACAGCGTGGACGCGGTGGCGAAAGGGGCGGCGCGAGCCGAGCACCTGCTGGTGCTGGCCACGACGGCGGCCCTGCTGGC
GGTGGGGGGCCTGCGCCGACTGCGCACGCGGCGCCTGGCCCAACGCCCGCGGTGA

Upstream 100 bases:

>100_bases
AAATCATCTCCCGGGAGGTCCTCCTCTTCCGGCAGGAGCGCAGGGCGGCGCGCACCATCCACCCCGCGGAACCTGAATGA
GGCCCTGAAAGGGGAACACG

Downstream 100 bases:

>100_bases
CGCGCGGAAACTCCACATGCCCCAAAACGGAAAACCCCCGGTGTCCACAAGGGACACCGGGGGTTTCTCAAAAAGAATCC
GGCAGCGACCTACTCTCCCG

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MAAGPLPWLLTHGTAALLFAALVAGGLGVPIPEDLVLLSLGILAHQDVLPIALAVAVAITGVLCGDTALFITAQRLGPAL
YAHPRMKKLLPPERRERLAQLYARHGGRCIFVGRFLSVLRGAVFIMAAVQGMRLRDFLLWDALALCLSAPVVVALGYAFS
HSVDAVAKGAARAEHLLVLATTAALLAVGGLRRLRTRRLAQRPR

Sequences:

>Translated_204_residues
MAAGPLPWLLTHGTAALLFAALVAGGLGVPIPEDLVLLSLGILAHQDVLPIALAVAVAITGVLCGDTALFITAQRLGPAL
YAHPRMKKLLPPERRERLAQLYARHGGRCIFVGRFLSVLRGAVFIMAAVQGMRLRDFLLWDALALCLSAPVVVALGYAFS
HSVDAVAKGAARAEHLLVLATTAALLAVGGLRRLRTRRLAQRPR
>Mature_203_residues
AAGPLPWLLTHGTAALLFAALVAGGLGVPIPEDLVLLSLGILAHQDVLPIALAVAVAITGVLCGDTALFITAQRLGPALY
AHPRMKKLLPPERRERLAQLYARHGGRCIFVGRFLSVLRGAVFIMAAVQGMRLRDFLLWDALALCLSAPVVVALGYAFSH
SVDAVAKGAARAEHLLVLATTAALLAVGGLRRLRTRRLAQRPR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21655; Mature: 21524

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGPLPWLLTHGTAALLFAALVAGGLGVPIPEDLVLLSLGILAHQDVLPIALAVAVAIT
CCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLCGDTALFITAQRLGPALYAHPRMKKLLPPERRERLAQLYARHGGRCIFVGRFLSVLR
HHHHCCHHHEEEHHHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
GAVFIMAAVQGMRLRDFLLWDALALCLSAPVVVALGYAFSHSVDAVAKGAARAEHLLVLA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTAALLAVGGLRRLRTRRLAQRPR
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAGPLPWLLTHGTAALLFAALVAGGLGVPIPEDLVLLSLGILAHQDVLPIALAVAVAIT
CCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLCGDTALFITAQRLGPALYAHPRMKKLLPPERRERLAQLYARHGGRCIFVGRFLSVLR
HHHHCCHHHEEEHHHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
GAVFIMAAVQGMRLRDFLLWDALALCLSAPVVVALGYAFSHSVDAVAKGAARAEHLLVLA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTAALLAVGGLRRLRTRRLAQRPR
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]