| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762866
Identifier: 108762866
GI number: 108762866
Start: 373213
End: 374007
Strand: Reverse
Name: 108762866
Synonym: MXAN_0317
Alternate gene names: NA
Gene position: 374007-373213 (Counterclockwise)
Preceding gene: 108763176
Following gene: 108763659
Centisome position: 4.09
GC content: 66.16
Gene sequence:
>795_bases ATGGCCGTCCTCATCTTCTTCGTCTCGCACTGGCTGCTCTGCGTGTTCTTCCAGAGCTTCTTCCAGCACCGGTACGCGGC CCACCGCATGTACACCATGGGGCCGAAGACGGAGCGGGTGATGCACCTGCTCACCTACCTGGTGCAGGGCTCGTCCTACC TGTCACCCAAGGCGTACGCCATCCTCCACCGTGAGCACCATGCCTTCTCCGACACAGAGAAGGACCCGCACTCGCCCCAC TTCTTCAAGGATGTGGCGCGGATGATGTGGCACACCAAGGCGCGCTACGACGACTACGCGGCCGGCCGCGGTCAACCCGA GGCCCGCTTCCTGGGCGGCTACCCGGAGTGGCCGCTCGTGGACACCACGCTGCGCACCTCATGGTTCGCCACCCTGGGCT GGGTGGCCTTCTACTCCGCCTTCTACGTGATGTTCGCCACCTCGCCCTGGCAGTTCCTGCTGCTGCCCCTGCACTTCCTC ATGGGCCCGGTGCACGGCGCCATCGTCAACTGGTGCGGCCACAAGTACGGCTACCGGAACTTCGACAGCACCGACAAGTC GCGCAACTCCCTGCCCATGGACTTCCTCTGCATGGGGGAGCTCTTCCAGAACAACCACCATAAGTACGGCAGCAGCCCCA ACTTCGCGGCGCGGAAGTTCGAGCTGGACCCCACGTGGCAGGTGATGCGCGTGCTCGCCCTGCTGCGCATCATCCACATC GCCACCCCGCAGCGCGCAGTCTGGCCGGAGGCCCGCGAGGCCGCACGCACCGGGGGCGCTGCTCGGGCCGCCTGA
Upstream 100 bases:
>100_bases TGTCGCCCCGTGGGGCAGGGCCGCCGCTCTTCCGCCCCGCGTGACGCTGCCATGACATGCCCGGTGTTAGCCCGGTTCAG TCACTGACCAGGGAACTCGA
Downstream 100 bases:
>100_bases CGGGCAGGCCAGCAACACACGGCGGGCACGTGCGGGGCGCGTTAAGAGTGCCCCCGTGCCCGCCGATACCCCGCTCCGTC TCCGCATCCTCGAAGCAGTG
Product: fatty acid desaturase family protein
Products: NA
Alternate protein names: Fatty-Acid Desaturase; Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Stearoyl-CoA Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Transmembrane Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta-9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYAILHREHHAFSDTEKDPHSPH FFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLVDTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFL MGPVHGAIVNWCGHKYGYRNFDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI ATPQRAVWPEAREAARTGGAARAA
Sequences:
>Translated_264_residues MAVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYAILHREHHAFSDTEKDPHSPH FFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLVDTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFL MGPVHGAIVNWCGHKYGYRNFDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI ATPQRAVWPEAREAARTGGAARAA >Mature_263_residues AVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYAILHREHHAFSDTEKDPHSPHF FKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLVDTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFLM GPVHGAIVNWCGHKYGYRNFDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHIA TPQRAVWPEAREAARTGGAARAA
Specific function: Unknown
COG id: COG1398
COG function: function code I; Fatty-acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30648; Mature: 30516
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHH ILHREHHAFSDTEKDPHSPHFFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLV HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCCCC DTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFLMGPVHGAIVNWCGHKYGYRN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH ATPQRAVWPEAREAARTGGAARAA CCCCHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure AVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHH ILHREHHAFSDTEKDPHSPHFFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLV HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCCCC DTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFLMGPVHGAIVNWCGHKYGYRN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH ATPQRAVWPEAREAARTGGAARAA CCCCHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA