Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108762866

Identifier: 108762866

GI number: 108762866

Start: 373213

End: 374007

Strand: Reverse

Name: 108762866

Synonym: MXAN_0317

Alternate gene names: NA

Gene position: 374007-373213 (Counterclockwise)

Preceding gene: 108763176

Following gene: 108763659

Centisome position: 4.09

GC content: 66.16

Gene sequence:

>795_bases
ATGGCCGTCCTCATCTTCTTCGTCTCGCACTGGCTGCTCTGCGTGTTCTTCCAGAGCTTCTTCCAGCACCGGTACGCGGC
CCACCGCATGTACACCATGGGGCCGAAGACGGAGCGGGTGATGCACCTGCTCACCTACCTGGTGCAGGGCTCGTCCTACC
TGTCACCCAAGGCGTACGCCATCCTCCACCGTGAGCACCATGCCTTCTCCGACACAGAGAAGGACCCGCACTCGCCCCAC
TTCTTCAAGGATGTGGCGCGGATGATGTGGCACACCAAGGCGCGCTACGACGACTACGCGGCCGGCCGCGGTCAACCCGA
GGCCCGCTTCCTGGGCGGCTACCCGGAGTGGCCGCTCGTGGACACCACGCTGCGCACCTCATGGTTCGCCACCCTGGGCT
GGGTGGCCTTCTACTCCGCCTTCTACGTGATGTTCGCCACCTCGCCCTGGCAGTTCCTGCTGCTGCCCCTGCACTTCCTC
ATGGGCCCGGTGCACGGCGCCATCGTCAACTGGTGCGGCCACAAGTACGGCTACCGGAACTTCGACAGCACCGACAAGTC
GCGCAACTCCCTGCCCATGGACTTCCTCTGCATGGGGGAGCTCTTCCAGAACAACCACCATAAGTACGGCAGCAGCCCCA
ACTTCGCGGCGCGGAAGTTCGAGCTGGACCCCACGTGGCAGGTGATGCGCGTGCTCGCCCTGCTGCGCATCATCCACATC
GCCACCCCGCAGCGCGCAGTCTGGCCGGAGGCCCGCGAGGCCGCACGCACCGGGGGCGCTGCTCGGGCCGCCTGA

Upstream 100 bases:

>100_bases
TGTCGCCCCGTGGGGCAGGGCCGCCGCTCTTCCGCCCCGCGTGACGCTGCCATGACATGCCCGGTGTTAGCCCGGTTCAG
TCACTGACCAGGGAACTCGA

Downstream 100 bases:

>100_bases
CGGGCAGGCCAGCAACACACGGCGGGCACGTGCGGGGCGCGTTAAGAGTGCCCCCGTGCCCGCCGATACCCCGCTCCGTC
TCCGCATCCTCGAAGCAGTG

Product: fatty acid desaturase family protein

Products: NA

Alternate protein names: Fatty-Acid Desaturase; Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Stearoyl-CoA Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Transmembrane Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta-9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYAILHREHHAFSDTEKDPHSPH
FFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLVDTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFL
MGPVHGAIVNWCGHKYGYRNFDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI
ATPQRAVWPEAREAARTGGAARAA

Sequences:

>Translated_264_residues
MAVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYAILHREHHAFSDTEKDPHSPH
FFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLVDTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFL
MGPVHGAIVNWCGHKYGYRNFDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI
ATPQRAVWPEAREAARTGGAARAA
>Mature_263_residues
AVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYAILHREHHAFSDTEKDPHSPHF
FKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLVDTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFLM
GPVHGAIVNWCGHKYGYRNFDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHIA
TPQRAVWPEAREAARTGGAARAA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30648; Mature: 30516

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVLIFFVSHWLLCVFFQSFFQHRYAAHRMYTMGPKTERVMHLLTYLVQGSSYLSPKAYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHH
ILHREHHAFSDTEKDPHSPHFFKDVARMMWHTKARYDDYAAGRGQPEARFLGGYPEWPLV
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCCCC
DTTLRTSWFATLGWVAFYSAFYVMFATSPWQFLLLPLHFLMGPVHGAIVNWCGHKYGYRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FDSTDKSRNSLPMDFLCMGELFQNNHHKYGSSPNFAARKFELDPTWQVMRVLALLRIIHI
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
ATPQRAVWPEAREAARTGGAARAA
CCCCHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA