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The map label for this gene is insF1 [C]

Identifier: 108762996

GI number: 108762996

Start: 5537586

End: 5538434

Strand: Reverse

Name: insF1 [C]

Synonym: MXAN_4473

Alternate gene names: 108762996

Gene position: 5538434-5537586 (Counterclockwise)

Preceding gene: 108760556

Following gene: 108763199

Centisome position: 60.6

GC content: 67.26

Gene sequence:

>849_bases
GTGAAGGCGAACCAGGCCGTCCACAGCATCACGACGCTCTGCCGTGTCCTGGAGGTGTCCGAGAGCGGCTACCACGCATG
GCGGACGCGCCTTCCCTCGAAGCGCGCGGTCGCGGACGCGGGCCTCAGCAAGCGCATTCGCGCCATCCACGCGATGAGCG
ACGGCACCTACGGCGTGCCGCGCATCCACGCCGAACTCGCGGCAGAGGGCGTGCACATCGGCCGCAAGCGTGTCGCCCGT
CTCATGCGGGCAGCGCACCTTGAGGGCGTCAGTCGCCGCAGGTGGTGCGTCACCACGACGCGCGACGAGCGCGCACGCCC
TGCGCCCGACCTGGTCGACCGGAAATTCGTAGCCCCTGGACCCGACCACCTCTGGGTGGCTGACATCACGTACATTCCGA
CGCACGCCGGTTTCCTCTACCTCGCCGTCGTGCTTGACGCATGGAGCCGTAAAGTCGTCGGCTGGGCCATGGCTGGCCAC
CTCAAGACGGAGCTCGTCGTGCAGGCACTCGACATGGCTGTGGGGCAGCGTCAGCCCCAAAGCGTCGTGCACCACAGCGA
CCAAGGGACGCAGTACACCTCGATTGGCTTCGGGCTTCGGTGCAAGGAAGCTGGCGTGCGCCCATCCATGGGCAGCGTCG
GCGACGCGTACGACAACGCGATGTGTGAAAGCTTCTTCGCCACGCTCGAGTGCGAACTGCTCGCACGCCGCCGCTTCACG
TCTCACGCCGAGGCGCGGATGGCCGTCTTCCGCTTCATCGAGGGCTGGTACAATCCGCTCCGGCGCCACTCCGCGCTCGA
CTACGAGTCACCCGCTGGTTACGAGAAGAAGCACCGCGCTGCCGCTTGA

Upstream 100 bases:

>100_bases
CGCGAGGTGCGGGTGCTGCGTGAGGAGCGTGACATCCTAAAAAAGCTGCGGCCTGGTTCGCGCAGGAATCCGTGGCGACG
CCCAAGCGGCGTACCGACTC

Downstream 100 bases:

>100_bases
GGGCGAAAGCGCGGAACGCTCTGCGGAACCGGGGCAACTTCAGTAGAGAACGAACGTCCCAGCGTCGCTGACGCTCCGAC
TGCTCGCAGTGGCCGGAACG

Product: IS5 family transposase orfB

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKANQAVHSITTLCRVLEVSESGYHAWRTRLPSKRAVADAGLSKRIRAIHAMSDGTYGVPRIHAELAAEGVHIGRKRVAR
LMRAAHLEGVSRRRWCVTTTRDERARPAPDLVDRKFVAPGPDHLWVADITYIPTHAGFLYLAVVLDAWSRKVVGWAMAGH
LKTELVVQALDMAVGQRQPQSVVHHSDQGTQYTSIGFGLRCKEAGVRPSMGSVGDAYDNAMCESFFATLECELLARRRFT
SHAEARMAVFRFIEGWYNPLRRHSALDYESPAGYEKKHRAAA

Sequences:

>Translated_282_residues
MKANQAVHSITTLCRVLEVSESGYHAWRTRLPSKRAVADAGLSKRIRAIHAMSDGTYGVPRIHAELAAEGVHIGRKRVAR
LMRAAHLEGVSRRRWCVTTTRDERARPAPDLVDRKFVAPGPDHLWVADITYIPTHAGFLYLAVVLDAWSRKVVGWAMAGH
LKTELVVQALDMAVGQRQPQSVVHHSDQGTQYTSIGFGLRCKEAGVRPSMGSVGDAYDNAMCESFFATLECELLARRRFT
SHAEARMAVFRFIEGWYNPLRRHSALDYESPAGYEKKHRAAA
>Mature_282_residues
MKANQAVHSITTLCRVLEVSESGYHAWRTRLPSKRAVADAGLSKRIRAIHAMSDGTYGVPRIHAELAAEGVHIGRKRVAR
LMRAAHLEGVSRRRWCVTTTRDERARPAPDLVDRKFVAPGPDHLWVADITYIPTHAGFLYLAVVLDAWSRKVVGWAMAGH
LKTELVVQALDMAVGQRQPQSVVHHSDQGTQYTSIGFGLRCKEAGVRPSMGSVGDAYDNAMCESFFATLECELLARRRFT
SHAEARMAVFRFIEGWYNPLRRHSALDYESPAGYEKKHRAAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=238, Percent_Identity=39.0756302521008, Blast_Score=164, Evalue=8e-41,
Organism=Escherichia coli, GI1788405, Length=284, Percent_Identity=37.3239436619718, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1787263, Length=284, Percent_Identity=37.3239436619718, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1786753, Length=284, Percent_Identity=37.3239436619718, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1786570, Length=284, Percent_Identity=37.3239436619718, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1786490, Length=284, Percent_Identity=37.3239436619718, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1789981, Length=269, Percent_Identity=31.2267657992565, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31486; Mature: 31486

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANQAVHSITTLCRVLEVSESGYHAWRTRLPSKRAVADAGLSKRIRAIHAMSDGTYGVP
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
RIHAELAAEGVHIGRKRVARLMRAAHLEGVSRRRWCVTTTRDERARPAPDLVDRKFVAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCC
PDHLWVADITYIPTHAGFLYLAVVLDAWSRKVVGWAMAGHLKTELVVQALDMAVGQRQPQ
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SVVHHSDQGTQYTSIGFGLRCKEAGVRPSMGSVGDAYDNAMCESFFATLECELLARRRFT
HHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SHAEARMAVFRFIEGWYNPLRRHSALDYESPAGYEKKHRAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MKANQAVHSITTLCRVLEVSESGYHAWRTRLPSKRAVADAGLSKRIRAIHAMSDGTYGVP
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
RIHAELAAEGVHIGRKRVARLMRAAHLEGVSRRRWCVTTTRDERARPAPDLVDRKFVAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCC
PDHLWVADITYIPTHAGFLYLAVVLDAWSRKVVGWAMAGHLKTELVVQALDMAVGQRQPQ
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SVVHHSDQGTQYTSIGFGLRCKEAGVRPSMGSVGDAYDNAMCESFFATLECELLARRRFT
HHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SHAEARMAVFRFIEGWYNPLRRHSALDYESPAGYEKKHRAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]