| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yeeZ [C]
Identifier: 108763199
GI number: 108763199
Start: 5533767
End: 5534744
Strand: Reverse
Name: yeeZ [C]
Synonym: MXAN_4470
Alternate gene names: 108763199
Gene position: 5534744-5533767 (Counterclockwise)
Preceding gene: 108762996
Following gene: 108759817
Centisome position: 60.56
GC content: 70.04
Gene sequence:
>978_bases ATGGGCACGGTTGCGTTGTTCGGCGCCACGGGCGTCGTCGGACACAGCATCGCGCAGGCGCTGTGGGGGCAGGGGCGGGG CTACCGCGTGGTGGGGCGCTCCCGGGAGGGACTCCAGCGGGAGTTCGGGGCGGACCCGCAGGCGGAGATCGTCACCTGGA ATCCCGACGACATGGCCTCCATCCAGGCCGCGGCCCGGGGCGTCCAGACGCTCATCTATCTGGTCGGCGTGCCCTATTGG CAATTCCACCTCCACCCCGTGCTGATGAAGCGCACGCTCGACGCCGCCATCGCCGAGGGCGTGGAGCGCATCGTCTTCAT CGCCAGCGTGTACCCCTACGGCCGGCCGCGCACGGACGTCGTCAACGAGTCCCACCCCCGCGTGCCGCACACGAACAAGG GCCGCTTGCGCAAGGCTCAGGAGGACCTGTTGCTCGCGGCGGACAAGGCGGGCTCCATCCAAGTCACCATCCTCCGCCTC CCGGACTTCTACGGCCCGGGCGTGGAGAACAGCTTCCTCCACCGCGCCTTCGTCGCGGCCTCACAGGGCAAGCGCGCCCA GCTCATCGGCCCCATCGACACGCCCCATGAGTTCGTCTACGTGCCCGACGTGGGGCCCACCGTGACGGCGCTCATGGACC ATCCGGGGGCCTACGGCCGCTTCTGGAACCTCGGGGGCGCGGGCGTCACCTCCCAGGCGGCCCTGGTGGAGGACATCTAC GCCCAGGCCGGCCACCCCGCGAAGTACTCAGTGCTGGGGCCGGGGATGGTGCGCCTCATCGGCCTCTTCAGCCCGTTCAT GCGCGAGCTCGGGGAGATGCACTACCTGCACACCTCGCCCGTCATCATGGACGACTCGGCGCTGCGGGCGCTGCTCGGCG ACATCCGGAAGACGCCGTACCGCGACGGCATCCGCCAGACGCTCGCGGCGCTCAGTCCAGCCCCCGTTGCCACAGGTCAT CCTCATCCAGCCCCATGA
Upstream 100 bases:
>100_bases CCCAGTGTAGGCCTTGACCCACTGAACGCCCAGCAGTAGATGAACGGCGTTCATGAACGGTGTTTACAAACCACTCGCCG TTCGGGAAAGGGAGCAGGAC
Downstream 100 bases:
>100_bases GGTGACCGACCTCGTGCATGACGGTGATGCCAATCTGCTCGATGAGCTCCTCGCGGGTGCGGGCGAAGCGCTCCAGGTTC TTCTGGTACAGCACGATGGA
Product: NAD-dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; Sugar Dehydratase/Epimerase; Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; UDP-Glucose 4-Epimerase; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MGTVALFGATGVVGHSIAQALWGQGRGYRVVGRSREGLQREFGADPQAEIVTWNPDDMASIQAAARGVQTLIYLVGVPYW QFHLHPVLMKRTLDAAIAEGVERIVFIASVYPYGRPRTDVVNESHPRVPHTNKGRLRKAQEDLLLAADKAGSIQVTILRL PDFYGPGVENSFLHRAFVAASQGKRAQLIGPIDTPHEFVYVPDVGPTVTALMDHPGAYGRFWNLGGAGVTSQAALVEDIY AQAGHPAKYSVLGPGMVRLIGLFSPFMRELGEMHYLHTSPVIMDDSALRALLGDIRKTPYRDGIRQTLAALSPAPVATGH PHPAP
Sequences:
>Translated_325_residues MGTVALFGATGVVGHSIAQALWGQGRGYRVVGRSREGLQREFGADPQAEIVTWNPDDMASIQAAARGVQTLIYLVGVPYW QFHLHPVLMKRTLDAAIAEGVERIVFIASVYPYGRPRTDVVNESHPRVPHTNKGRLRKAQEDLLLAADKAGSIQVTILRL PDFYGPGVENSFLHRAFVAASQGKRAQLIGPIDTPHEFVYVPDVGPTVTALMDHPGAYGRFWNLGGAGVTSQAALVEDIY AQAGHPAKYSVLGPGMVRLIGLFSPFMRELGEMHYLHTSPVIMDDSALRALLGDIRKTPYRDGIRQTLAALSPAPVATGH PHPAP >Mature_324_residues GTVALFGATGVVGHSIAQALWGQGRGYRVVGRSREGLQREFGADPQAEIVTWNPDDMASIQAAARGVQTLIYLVGVPYWQ FHLHPVLMKRTLDAAIAEGVERIVFIASVYPYGRPRTDVVNESHPRVPHTNKGRLRKAQEDLLLAADKAGSIQVTILRLP DFYGPGVENSFLHRAFVAASQGKRAQLIGPIDTPHEFVYVPDVGPTVTALMDHPGAYGRFWNLGGAGVTSQAALVEDIYA QAGHPAKYSVLGPGMVRLIGLFSPFMRELGEMHYLHTSPVIMDDSALRALLGDIRKTPYRDGIRQTLAALSPAPVATGHP HPAP
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35219; Mature: 35088
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVALFGATGVVGHSIAQALWGQGRGYRVVGRSREGLQREFGADPQAEIVTWNPDDMAS CCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCHHHH IQAAARGVQTLIYLVGVPYWQFHLHPVLMKRTLDAAIAEGVERIVFIASVYPYGRPRTDV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VNESHPRVPHTNKGRLRKAQEDLLLAADKAGSIQVTILRLPDFYGPGVENSFLHRAFVAA CCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH SQGKRAQLIGPIDTPHEFVYVPDVGPTVTALMDHPGAYGRFWNLGGAGVTSQAALVEDIY CCCCCEEEECCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHH AQAGHPAKYSVLGPGMVRLIGLFSPFMRELGEMHYLHTSPVIMDDSALRALLGDIRKTPY HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCEEECHHHHHHHHHHHHCCCH RDGIRQTLAALSPAPVATGHPHPAP HHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GTVALFGATGVVGHSIAQALWGQGRGYRVVGRSREGLQREFGADPQAEIVTWNPDDMAS CCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCHHHH IQAAARGVQTLIYLVGVPYWQFHLHPVLMKRTLDAAIAEGVERIVFIASVYPYGRPRTDV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VNESHPRVPHTNKGRLRKAQEDLLLAADKAGSIQVTILRLPDFYGPGVENSFLHRAFVAA CCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH SQGKRAQLIGPIDTPHEFVYVPDVGPTVTALMDHPGAYGRFWNLGGAGVTSQAALVEDIY CCCCCEEEECCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHH AQAGHPAKYSVLGPGMVRLIGLFSPFMRELGEMHYLHTSPVIMDDSALRALLGDIRKTPY HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCEEECHHHHHHHHHHHHCCCH RDGIRQTLAALSPAPVATGHPHPAP HHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA