| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108762871
Identifier: 108762871
GI number: 108762871
Start: 6671271
End: 6672017
Strand: Direct
Name: 108762871
Synonym: MXAN_5359
Alternate gene names: NA
Gene position: 6671271-6672017 (Clockwise)
Preceding gene: 108757999
Following gene: 108760051
Centisome position: 72.99
GC content: 68.54
Gene sequence:
>747_bases TTGAGCCTGTCCTTCATCACCCTTGGCATCGGCGACGCATTCTCCGCCCTGCGATATTCGTCCTGTTTCGCCGTGGAGGC GGAGGACCAGGTCCTACTCGTGGACTGCCCGCATCCCATCCGGAAGATGATGCGCGAGGCGTCCGAGTCCTCCGGCGTGC CCCTGGACGCGGACCGCGTCAGCGCCGTGGCCCTCACCCACCTGCACGCGGACCATGCGTCGGGCCTGGAGAGCCTCGGC TACTTCTCCTTCTTCGTGCTGCAGCGGAAGCTGGAGGTGCTGGCCCACCCCGCCGTCGCGGACCGGCTGTGGGAAGGCAA CCTGGCCGCGGGCATGGAGTGCCTCATCGAGCGGCGCGGGGAGCCCCCCAACGACAAGCACTTCGAGGACTACTTCCGCC ACACGCCGCTCTCCACGGAGACCGCCGTGCGGCACGGCCCCTTTCTCATCGAGAGCCGGATGACGTACCACCACGTGCCC ACCACCGCGCTGCGCATCCACGCGGGGGGCCGCTGCCTGGGGTACAGCGCGGACACCGCCTTCGACGAGGGCCTCATCGA CTGGCTCTCCAAGGCGGACCTCATCATCCACGAGACGAACTACGGCGTGCACACGCCCTACGAGAAGCTGGCGGCGCTGC CCGCCGAGCTGCGCGCCCGGATGCGGCTCATCCACTACCCGGATGACTTCGACACCAGCGCGAGCGTCATCGAACCGCTC GCGCAGGGCCGGCGCTACAACGTCTGA
Upstream 100 bases:
>100_bases AGGCGCGCGTGGCGCGCGGCGAGGACGTTTCCGCCTTCTGTCCGCCGGCCGTCGCGACGAAGCTTCGGGAGCGACTCGAC CCTTCCCTCCGGAGCCTGCC
Downstream 100 bases:
>100_bases GGCGCGAACGAGCGCCCGGGAGATTCCACCCCGGGCGCCCGGTGCCGTCAGGCGCTACTGCGAGAAGATGACCAGCGAGT AGGGACCGATGGCGAACGAC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase Domain-Containing Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily III
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSLSFITLGIGDAFSALRYSSCFAVEAEDQVLLVDCPHPIRKMMREASESSGVPLDADRVSAVALTHLHADHASGLESLG YFSFFVLQRKLEVLAHPAVADRLWEGNLAAGMECLIERRGEPPNDKHFEDYFRHTPLSTETAVRHGPFLIESRMTYHHVP TTALRIHAGGRCLGYSADTAFDEGLIDWLSKADLIIHETNYGVHTPYEKLAALPAELRARMRLIHYPDDFDTSASVIEPL AQGRRYNV
Sequences:
>Translated_248_residues MSLSFITLGIGDAFSALRYSSCFAVEAEDQVLLVDCPHPIRKMMREASESSGVPLDADRVSAVALTHLHADHASGLESLG YFSFFVLQRKLEVLAHPAVADRLWEGNLAAGMECLIERRGEPPNDKHFEDYFRHTPLSTETAVRHGPFLIESRMTYHHVP TTALRIHAGGRCLGYSADTAFDEGLIDWLSKADLIIHETNYGVHTPYEKLAALPAELRARMRLIHYPDDFDTSASVIEPL AQGRRYNV >Mature_247_residues SLSFITLGIGDAFSALRYSSCFAVEAEDQVLLVDCPHPIRKMMREASESSGVPLDADRVSAVALTHLHADHASGLESLGY FSFFVLQRKLEVLAHPAVADRLWEGNLAAGMECLIERRGEPPNDKHFEDYFRHTPLSTETAVRHGPFLIESRMTYHHVPT TALRIHAGGRCLGYSADTAFDEGLIDWLSKADLIIHETNYGVHTPYEKLAALPAELRARMRLIHYPDDFDTSASVIEPLA QGRRYNV
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27676; Mature: 27544
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00602 ALDOLASE_CLASS_II_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSFITLGIGDAFSALRYSSCFAVEAEDQVLLVDCPHPIRKMMREASESSGVPLDADRV CCCEEEEEECCHHHHHHHHCCEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHH SAVALTHLHADHASGLESLGYFSFFVLQRKLEVLAHPAVADRLWEGNLAAGMECLIERRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCC EPPNDKHFEDYFRHTPLSTETAVRHGPFLIESRMTYHHVPTTALRIHAGGRCLGYSADTA CCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCEEEECCCEEEEEECCCEEECCCCCCH FDEGLIDWLSKADLIIHETNYGVHTPYEKLAALPAELRARMRLIHYPDDFDTSASVIEPL HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHEEEECCCCCCCHHHHHHHH AQGRRYNV HCCCCCCC >Mature Secondary Structure SLSFITLGIGDAFSALRYSSCFAVEAEDQVLLVDCPHPIRKMMREASESSGVPLDADRV CCEEEEEECCHHHHHHHHCCEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHH SAVALTHLHADHASGLESLGYFSFFVLQRKLEVLAHPAVADRLWEGNLAAGMECLIERRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCC EPPNDKHFEDYFRHTPLSTETAVRHGPFLIESRMTYHHVPTTALRIHAGGRCLGYSADTA CCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCEEEECCCEEEEEECCCEEECCCCCCH FDEGLIDWLSKADLIIHETNYGVHTPYEKLAALPAELRARMRLIHYPDDFDTSASVIEPL HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHEEEECCCCCCCHHHHHHHH AQGRRYNV HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA