| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762823
Identifier: 108762823
GI number: 108762823
Start: 3870787
End: 3871467
Strand: Reverse
Name: 108762823
Synonym: MXAN_3328
Alternate gene names: NA
Gene position: 3871467-3870787 (Counterclockwise)
Preceding gene: 108761841
Following gene: 108762319
Centisome position: 42.36
GC content: 67.55
Gene sequence:
>681_bases ATGAGCGACGGTCGCAAGCCCTCCCAGCCTGGAACGCAGCCTCCTCGGGCGGCGTCTCCGTCTGGCTCTCAGCCGCGCAC GCCGACGAGCCCCGGCATGCCGCGCGCACCCAGCCAGTCCAACCTGCGGGTGATGTCCGCCGCGCGCGCCGAGCCGCTCG TGAAGGAGAAGCCAGACGGCCCGCTGGGGAAACGCCTGGCGGGAGATGCGTCGAACCACCTCCTCAATGGCGTCTCCATC CTCAAGGAGCTGGTCGCGGATTTCCGACGGAGCGACCGCTTCTTCAAATACAAGGCGTCCATCATCGCCGGCTGGCTGGT GATGACGGTGACGAGCCTGGCCATTGCGTGCCCGGGCAGTACGGTGCGCAAGGGGGACATGGACGCGCGCCTGGTGCTCA GTGACAGGTTGGACCGGCCCTCGGTCACCATCTGGAACGAGAGCAAGGAGCCCTGGTACGACGTCACCCTCACCGTCAAC GGTCAGTACCAGGCGGCGGTGCTGACGGTGGCCCCAGGTGAGTTCATCACCATCACCCCCAAGCAGTTGATGGGCTCCAG CGGCGCCGCGCCCGCGGACCTCCGCTTCCAGTCCATCCAGATGCGCAGCCGGGATGACAGCGCGGACCTCACAGCGGACC TCAACGCCGCCTGGGAGCGCATTCACAAGCCGCAGCAGTAG
Upstream 100 bases:
>100_bases GCTGGAGACCCAGCCTGAAAACGCGGTGGCGTCACGCGCGCTTCAGCAACTCAAGGCACAGTAGCCATCCACAGGCCCAG CCCTCTACACTCGTTGTCCG
Downstream 100 bases:
>100_bases TCCGCCGTGGAAACACGAAGGGCGCCCTTCCTCTCGGAAGCGCGCCCTCGCGTTGCTCCCAGCCCCTTCTCGCGAAGGGG CCAGGTATGCAGTCCGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSDGRKPSQPGTQPPRAASPSGSQPRTPTSPGMPRAPSQSNLRVMSAARAEPLVKEKPDGPLGKRLAGDASNHLLNGVSI LKELVADFRRSDRFFKYKASIIAGWLVMTVTSLAIACPGSTVRKGDMDARLVLSDRLDRPSVTIWNESKEPWYDVTLTVN GQYQAAVLTVAPGEFITITPKQLMGSSGAAPADLRFQSIQMRSRDDSADLTADLNAAWERIHKPQQ
Sequences:
>Translated_226_residues MSDGRKPSQPGTQPPRAASPSGSQPRTPTSPGMPRAPSQSNLRVMSAARAEPLVKEKPDGPLGKRLAGDASNHLLNGVSI LKELVADFRRSDRFFKYKASIIAGWLVMTVTSLAIACPGSTVRKGDMDARLVLSDRLDRPSVTIWNESKEPWYDVTLTVN GQYQAAVLTVAPGEFITITPKQLMGSSGAAPADLRFQSIQMRSRDDSADLTADLNAAWERIHKPQQ >Mature_225_residues SDGRKPSQPGTQPPRAASPSGSQPRTPTSPGMPRAPSQSNLRVMSAARAEPLVKEKPDGPLGKRLAGDASNHLLNGVSIL KELVADFRRSDRFFKYKASIIAGWLVMTVTSLAIACPGSTVRKGDMDARLVLSDRLDRPSVTIWNESKEPWYDVTLTVNG QYQAAVLTVAPGEFITITPKQLMGSSGAAPADLRFQSIQMRSRDDSADLTADLNAAWERIHKPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24508; Mature: 24377
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGRKPSQPGTQPPRAASPSGSQPRTPTSPGMPRAPSQSNLRVMSAARAEPLVKEKPDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCHHCCCCC PLGKRLAGDASNHLLNGVSILKELVADFRRSDRFFKYKASIIAGWLVMTVTSLAIACPGS CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCC TVRKGDMDARLVLSDRLDRPSVTIWNESKEPWYDVTLTVNGQYQAAVLTVAPGEFITITP CCCCCCCCEEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCEEEEEEEECCCCEEEECH KQLMGSSGAAPADLRFQSIQMRSRDDSADLTADLNAAWERIHKPQQ HHHHCCCCCCCCCCCHHEEHCCCCCCCCCEEEHHHHHHHHHCCCCC >Mature Secondary Structure SDGRKPSQPGTQPPRAASPSGSQPRTPTSPGMPRAPSQSNLRVMSAARAEPLVKEKPDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCHHCCCCC PLGKRLAGDASNHLLNGVSILKELVADFRRSDRFFKYKASIIAGWLVMTVTSLAIACPGS CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCC TVRKGDMDARLVLSDRLDRPSVTIWNESKEPWYDVTLTVNGQYQAAVLTVAPGEFITITP CCCCCCCCEEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCEEEEEEEECCCCEEEECH KQLMGSSGAAPADLRFQSIQMRSRDDSADLTADLNAAWERIHKPQQ HHHHCCCCCCCCCCCHHEEHCCCCCCCCCEEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA