| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dnaJ
Identifier: 108762319
GI number: 108762319
Start: 3847177
End: 3848352
Strand: Reverse
Name: dnaJ
Synonym: MXAN_3292
Alternate gene names: 108762319
Gene position: 3848352-3847177 (Counterclockwise)
Preceding gene: 108762823
Following gene: 108760676
Centisome position: 42.11
GC content: 70.41
Gene sequence:
>1176_bases ATGGCGGACGACTACTATCAGACCCTCGGCGTCGATCGGTCGGCTTCAGCGGAGGACGTCAAGAAGGCGTACCGCAAGCT GGCGCGCAAGTACCACCCGGACGTCAACCCGGGCAACAAGGCCGCCGAGGAGAAGTTCAAGCAGGTGAGCGCGGCGTTCG AGGTGCTGTCAGACACCCGGAAGCGCAAGCTCTACGACGAGTTCGGCCCGGACGCCGAGAAGATTGGCTTCGACGAAAAG AAGGCGGAGGCCTATCGGGCCTACAAAGCCTCGGCCGGGAGCGCCGGTGCCGGGGGCATTCCCTATGGCGCCGAGGGCTT CGACCTGGGTGACCTCTTCGGCGACCTGTTCGGAGGCCGTGGCGGTGGCGCGGCGGGCGGCGCCCCGGGGGGCTTCGACA TTGGCGAGATGTTTGGGCGTCGGGGTCGCAACGCCGGGCCTGAGCGTGGAGAGGACCTGACGGTCCGCGTCCAGCTCACC CTGGCTGAAGCCGTCTCCGGAACCGAGCGCCCCCTGGCCTTCAACCGTCCGGGCCGGTGCTCCACGTGCAGTGGCCGAGG CACATCAGGACCGGTGTCCACCTGCAACGTTTGCAACGGTACGGGCCGAGCCCGGCGTTCCGGGAGCCTGTTCGGTGGCG CGGGCGCGTGCCCCAACTGCCACGGCACGGGCAAGGCCGCGCCACCCTGCCCCCAGTGCGGGGGCGCGGGTGTGAAGGAG GAGCTGGCCCGGCTGACGGTGAAGATTCCCGCGGGCGTGCACACCGGCTCAAAGGTGCGGCTCTCCGGCCAGGGCGCGGC GGGGACACGCGGCGGCCCCCCAGGAGACCTCTATATCGAGACCGAGGTGGCCGAACATCCCCTCGTGCGTCGCGAAGGCG ACGACCTGCACCTCGATCTGCCCGTGACGGTCTCCGAGGCCCTGCTGGGCGCCGACGTGCGCGTCCCCACGTTCCAGGGG GAAGTCACCGTGAAGGTGCTCCCCCACTCCCAATCCGGCCGCCGCATGCGGCTGAAGGGGCGCGGCGTTCCCTCGCTCAA GGGCGGAGCACAGGGCGACCTGTACCTCCACCTCCAGGTGAAGGTCCCCGAGGAAACAACCGCCGAGGCTCGGGCCGCCG CCGAGGCGCTCGCCCGGGCCTACCAGGGCGACGTCCGCCGCGAGCTGACGCTCTAG
Upstream 100 bases:
>100_bases CCTCCGGCGACGTTATACATCTCGCACGGTCCGGACAGTCCTTGCTGGCGCGTGCCTACCGGCTGGTTACGTTGAATCGG GTACACCACGGCGGGAACAA
Downstream 100 bases:
>100_bases CCTCTTGCCTCTTGTCCTGGGCGTCGCACCGTCATAGACGGACTGCGCCCCACCTTCTCACGCCGCCGAACCATACGGAG CACACGCGCACATGGGCCTC
Product: putative chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MADDYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKAAEEKFKQVSAAFEVLSDTRKRKLYDEFGPDAEKIGFDEK KAEAYRAYKASAGSAGAGGIPYGAEGFDLGDLFGDLFGGRGGGAAGGAPGGFDIGEMFGRRGRNAGPERGEDLTVRVQLT LAEAVSGTERPLAFNRPGRCSTCSGRGTSGPVSTCNVCNGTGRARRSGSLFGGAGACPNCHGTGKAAPPCPQCGGAGVKE ELARLTVKIPAGVHTGSKVRLSGQGAAGTRGGPPGDLYIETEVAEHPLVRREGDDLHLDLPVTVSEALLGADVRVPTFQG EVTVKVLPHSQSGRRMRLKGRGVPSLKGGAQGDLYLHLQVKVPEETTAEARAAAEALARAYQGDVRRELTL
Sequences:
>Translated_391_residues MADDYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKAAEEKFKQVSAAFEVLSDTRKRKLYDEFGPDAEKIGFDEK KAEAYRAYKASAGSAGAGGIPYGAEGFDLGDLFGDLFGGRGGGAAGGAPGGFDIGEMFGRRGRNAGPERGEDLTVRVQLT LAEAVSGTERPLAFNRPGRCSTCSGRGTSGPVSTCNVCNGTGRARRSGSLFGGAGACPNCHGTGKAAPPCPQCGGAGVKE ELARLTVKIPAGVHTGSKVRLSGQGAAGTRGGPPGDLYIETEVAEHPLVRREGDDLHLDLPVTVSEALLGADVRVPTFQG EVTVKVLPHSQSGRRMRLKGRGVPSLKGGAQGDLYLHLQVKVPEETTAEARAAAEALARAYQGDVRRELTL >Mature_390_residues ADDYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKAAEEKFKQVSAAFEVLSDTRKRKLYDEFGPDAEKIGFDEKK AEAYRAYKASAGSAGAGGIPYGAEGFDLGDLFGDLFGGRGGGAAGGAPGGFDIGEMFGRRGRNAGPERGEDLTVRVQLTL AEAVSGTERPLAFNRPGRCSTCSGRGTSGPVSTCNVCNGTGRARRSGSLFGGAGACPNCHGTGKAAPPCPQCGGAGVKEE LARLTVKIPAGVHTGSKVRLSGQGAAGTRGGPPGDLYIETEVAEHPLVRREGDDLHLDLPVTVSEALLGADVRVPTFQGE VTVKVLPHSQSGRRMRLKGRGVPSLKGGAQGDLYLHLQVKVPEETTAEARAAAEALARAYQGDVRRELTL
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=379, Percent_Identity=30.8707124010554, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI205360840, Length=379, Percent_Identity=30.8707124010554, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI4504511, Length=373, Percent_Identity=31.3672922252011, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI194328760, Length=391, Percent_Identity=30.4347826086957, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI194328758, Length=391, Percent_Identity=30.4347826086957, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI7706495, Length=393, Percent_Identity=29.5165394402036, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI6631085, Length=388, Percent_Identity=27.8350515463918, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI5453690, Length=382, Percent_Identity=28.2722513089005, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI23503241, Length=124, Percent_Identity=45.9677419354839, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=66.6666666666667, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=66.6666666666667, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI194328762, Length=361, Percent_Identity=25.4847645429363, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI47777312, Length=67, Percent_Identity=62.6865671641791, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27151736, Length=66, Percent_Identity=60.6060606060606, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI88501736, Length=66, Percent_Identity=60.6060606060606, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI21553335, Length=67, Percent_Identity=59.7014925373134, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI39204547, Length=380, Percent_Identity=22.6315789473684, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=51.5625, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI201862518, Length=69, Percent_Identity=53.6231884057971, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=53.6231884057971, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=53.6231884057971, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI194306642, Length=120, Percent_Identity=45.8333333333333, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI194306640, Length=120, Percent_Identity=45.8333333333333, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=51.5625, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9558755, Length=129, Percent_Identity=37.2093023255814, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=55.8823529411765, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI22749377, Length=88, Percent_Identity=48.8636363636364, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI5031741, Length=64, Percent_Identity=56.25, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI68077168, Length=75, Percent_Identity=53.3333333333333, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI68077166, Length=75, Percent_Identity=53.3333333333333, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI27735107, Length=80, Percent_Identity=45, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI24308127, Length=66, Percent_Identity=45.4545454545455, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI72534740, Length=209, Percent_Identity=33.0143540669856, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1786197, Length=383, Percent_Identity=36.5535248041775, Blast_Score=251, Evalue=4e-68, Organism=Escherichia coli, GI1787235, Length=378, Percent_Identity=31.2169312169312, Blast_Score=166, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17553096, Length=387, Percent_Identity=32.5581395348837, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17553098, Length=387, Percent_Identity=32.5581395348837, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17534355, Length=408, Percent_Identity=26.4705882352941, Blast_Score=110, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17554644, Length=75, Percent_Identity=53.3333333333333, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI212645553, Length=68, Percent_Identity=51.4705882352941, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17563890, Length=247, Percent_Identity=25.5060728744939, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=55.5555555555556, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17554900, Length=64, Percent_Identity=53.125, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115532378, Length=77, Percent_Identity=44.1558441558442, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17568643, Length=80, Percent_Identity=45, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538236, Length=69, Percent_Identity=49.2753623188406, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=371, Percent_Identity=32.6145552560647, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321094, Length=410, Percent_Identity=30.7317073170732, Blast_Score=126, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6323870, Length=376, Percent_Identity=31.3829787234043, Blast_Score=119, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6323119, Length=413, Percent_Identity=26.1501210653753, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6324252, Length=425, Percent_Identity=25.6470588235294, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323813, Length=126, Percent_Identity=43.6507936507937, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324321, Length=67, Percent_Identity=50.7462686567164, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=53.968253968254, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322194, Length=66, Percent_Identity=45.4545454545455, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322388, Length=68, Percent_Identity=45.5882352941176, Blast_Score=63, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552813, Length=366, Percent_Identity=30.6010928961749, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI45549272, Length=366, Percent_Identity=30.6010928961749, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI45552811, Length=366, Percent_Identity=30.8743169398907, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI20129487, Length=391, Percent_Identity=31.7135549872123, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24584014, Length=391, Percent_Identity=31.7135549872123, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24658562, Length=379, Percent_Identity=27.9683377308707, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24658555, Length=379, Percent_Identity=27.9683377308707, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI85726398, Length=394, Percent_Identity=27.1573604060914, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI28574949, Length=388, Percent_Identity=24.4845360824742, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI19920464, Length=389, Percent_Identity=25.9640102827763, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24654066, Length=69, Percent_Identity=57.9710144927536, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654070, Length=69, Percent_Identity=57.9710144927536, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654068, Length=69, Percent_Identity=57.9710144927536, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654072, Length=69, Percent_Identity=57.9710144927536, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=56.5217391304348, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI17737735, Length=95, Percent_Identity=44.2105263157895, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24668523, Length=95, Percent_Identity=44.2105263157895, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574723, Length=95, Percent_Identity=44.2105263157895, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=59.375, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24646562, Length=72, Percent_Identity=56.9444444444444, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646560, Length=72, Percent_Identity=56.9444444444444, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646558, Length=72, Percent_Identity=56.9444444444444, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646556, Length=72, Percent_Identity=56.9444444444444, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357547, Length=72, Percent_Identity=56.9444444444444, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI18858081, Length=66, Percent_Identity=53.030303030303, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355911, Length=65, Percent_Identity=52.3076923076923, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ_MYXXA (Q8KRC9)
Other databases:
- EMBL: AY033943 - ProteinModelPortal: Q8KRC9 - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 40914; Mature: 40783
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKAAEEKFKQVSAAFEVLSDTR CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRKLYDEFGPDAEKIGFDEKKAEAYRAYKASAGSAGAGGIPYGAEGFDLGDLFGDLFGGR HHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC GGGAAGGAPGGFDIGEMFGRRGRNAGPERGEDLTVRVQLTLAEAVSGTERPLAFNRPGRC CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCEECCCCCCC STCSGRGTSGPVSTCNVCNGTGRARRSGSLFGGAGACPNCHGTGKAAPPCPQCGGAGVKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ELARLTVKIPAGVHTGSKVRLSGQGAAGTRGGPPGDLYIETEVAEHPLVRREGDDLHLDL HHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHCCCEECCCCCEEEEC PVTVSEALLGADVRVPTFQGEVTVKVLPHSQSGRRMRLKGRGVPSLKGGAQGDLYLHLQV CCHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE KVPEETTAEARAAAEALARAYQGDVRRELTL ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADDYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKAAEEKFKQVSAAFEVLSDTR CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRKLYDEFGPDAEKIGFDEKKAEAYRAYKASAGSAGAGGIPYGAEGFDLGDLFGDLFGGR HHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC GGGAAGGAPGGFDIGEMFGRRGRNAGPERGEDLTVRVQLTLAEAVSGTERPLAFNRPGRC CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCEECCCCCCC STCSGRGTSGPVSTCNVCNGTGRARRSGSLFGGAGACPNCHGTGKAAPPCPQCGGAGVKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ELARLTVKIPAGVHTGSKVRLSGQGAAGTRGGPPGDLYIETEVAEHPLVRREGDDLHLDL HHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHCCCEECCCCCEEEEC PVTVSEALLGADVRVPTFQGEVTVKVLPHSQSGRRMRLKGRGVPSLKGGAQGDLYLHLQV CCHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE KVPEETTAEARAAAEALARAYQGDVRRELTL ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA