Click here to switch to the map view.

The map label for this gene is ycjL [C]

Identifier: 108762652

GI number: 108762652

Start: 6359089

End: 6359853

Strand: Reverse

Name: ycjL [C]

Synonym: MXAN_5086

Alternate gene names: 108762652

Gene position: 6359853-6359089 (Counterclockwise)

Preceding gene: 108759139

Following gene: 108760113

Centisome position: 69.58

GC content: 67.71

Gene sequence:

>765_bases
ATGAACAACCATTCGCGTCACCACGGGCCGGCGCCGCGCCGCCCCAACATCGGCATCACCCCGGACTGGAGTCCGGCCGG
AGAACAGCCCTTTGCCCGCTATGAGCTGAAGGTTCCGTACGCGGACGCCGTCCTTCGCGCGGGCGGGCTGCCCTTCGTGT
TGCCGTATTCGGACGAGCCGGCCTGCGTGGAGTCCTATCTGGACCGCATCTCCGGGGTGCTCGTCACGGGCGGCGCGTTC
GACATTCCTCCGTCGGCCTACGGCGAGGATGCGCGCGAGGGCTTGGGGGCGCTGAAGGAAGGGCGTACCGCTTTCGAGGC
GGCGCTCATGCGCGGCGCGCTCAAGCGCAACATGCCGCTGCTGGGCATCTGTGGCGGCATGCAACTGCTCAACGTCATCC
TGGGTGGCACGCTGTACCAGGACATCGGCCGTGAGGTGGAGGGCGCTCGCGAGCATGAGCAGAAGCACGACCGCACGCAC
CCGCAGCACCCGGTGGACGTGAAGAGCGGCACGTTGCTGGCGGAGGCGGTGGGGTATGGCCAGTTGATGGTCAACTCCAC
CCACCACCAGTCGGTGCGCGGCGTGGGCAAGGACGTGACGATTACCGCGGTGGCGCCGGATGGCGTGGTGGAGGCCATCG
AGTCCTCCGTGCACACCTTCGCCGTGGGCGTGCAGTGGCACCCCGAATACATGTCCACGACCATTCCGGTGCACGTGGGG
CTCTACAAGGCGTTCGTGCAGAAGGCGCGCGAGCATCGCCGGTGA

Upstream 100 bases:

>100_bases
ACGCGCTGCTCGCCGCGGATATCACCGAGCGTGTGAGGCGGTTGGTTGAGGCGTTTGAACAGGGGCGTTTCGGGGCATAG
CCTCGAAGCCAGGAGCTTCC

Downstream 100 bases:

>100_bases
GTCCCCGCGTCCTCCTGCTGGCGGGGTTGGAGCCCACGGGACGGGCGGGGCTCTTGGCGGATGTCGCCGCGGTGCGCGCG
CTGCGGGGCCAGCCGGTGGC

Product: class I glutamine amidotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNNHSRHHGPAPRRPNIGITPDWSPAGEQPFARYELKVPYADAVLRAGGLPFVLPYSDEPACVESYLDRISGVLVTGGAF
DIPPSAYGEDAREGLGALKEGRTAFEAALMRGALKRNMPLLGICGGMQLLNVILGGTLYQDIGREVEGAREHEQKHDRTH
PQHPVDVKSGTLLAEAVGYGQLMVNSTHHQSVRGVGKDVTITAVAPDGVVEAIESSVHTFAVGVQWHPEYMSTTIPVHVG
LYKAFVQKAREHRR

Sequences:

>Translated_254_residues
MNNHSRHHGPAPRRPNIGITPDWSPAGEQPFARYELKVPYADAVLRAGGLPFVLPYSDEPACVESYLDRISGVLVTGGAF
DIPPSAYGEDAREGLGALKEGRTAFEAALMRGALKRNMPLLGICGGMQLLNVILGGTLYQDIGREVEGAREHEQKHDRTH
PQHPVDVKSGTLLAEAVGYGQLMVNSTHHQSVRGVGKDVTITAVAPDGVVEAIESSVHTFAVGVQWHPEYMSTTIPVHVG
LYKAFVQKAREHRR
>Mature_254_residues
MNNHSRHHGPAPRRPNIGITPDWSPAGEQPFARYELKVPYADAVLRAGGLPFVLPYSDEPACVESYLDRISGVLVTGGAF
DIPPSAYGEDAREGLGALKEGRTAFEAALMRGALKRNMPLLGICGGMQLLNVILGGTLYQDIGREVEGAREHEQKHDRTH
PQHPVDVKSGTLLAEAVGYGQLMVNSTHHQSVRGVGKDVTITAVAPDGVVEAIESSVHTFAVGVQWHPEYMSTTIPVHVG
LYKAFVQKAREHRR

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RPE1 insert domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=227, Percent_Identity=32.5991189427313, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697
- InterPro:   IPR005728 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHSRHHGPAPRRPNIGITPDWSPAGEQPFARYELKVPYADAVLRAGGLPFVLPYSDEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCC
ACVESYLDRISGVLVTGGAFDIPPSAYGEDAREGLGALKEGRTAFEAALMRGALKRNMPL
HHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCE
LGICGGMQLLNVILGGTLYQDIGREVEGAREHEQKHDRTHPQHPVDVKSGTLLAEAVGYG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
QLMVNSTHHQSVRGVGKDVTITAVAPDGVVEAIESSVHTFAVGVQWHPEYMSTTIPVHVG
EEEECCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHEEEEEEEECHHHHCCCCHHHHH
LYKAFVQKAREHRR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MNNHSRHHGPAPRRPNIGITPDWSPAGEQPFARYELKVPYADAVLRAGGLPFVLPYSDEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCC
ACVESYLDRISGVLVTGGAFDIPPSAYGEDAREGLGALKEGRTAFEAALMRGALKRNMPL
HHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCE
LGICGGMQLLNVILGGTLYQDIGREVEGAREHEQKHDRTHPQHPVDVKSGTLLAEAVGYG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
QLMVNSTHHQSVRGVGKDVTITAVAPDGVVEAIESSVHTFAVGVQWHPEYMSTTIPVHVG
EEEECCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHEEEEEEEECHHHHCCCCHHHHH
LYKAFVQKAREHRR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893; 11030655 [H]