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The map label for this gene is ycaC [H]

Identifier: 108762617

GI number: 108762617

Start: 2580271

End: 2580948

Strand: Direct

Name: ycaC [H]

Synonym: MXAN_2237

Alternate gene names: 108762617

Gene position: 2580271-2580948 (Clockwise)

Preceding gene: 108763240

Following gene: 108761438

Centisome position: 28.23

GC content: 61.21

Gene sequence:

>678_bases
ATGAGCGCAGCAAACTTCAACGGGCAGAAGCCGACCATCGACCTGAAAGATGCGGTGATGCTGCTCATCGACCACCAGAG
CGGACTGTTTCAGACGGTGCAGGACATGGCGATGCCGTCGCTTCGAGCAAACGCGGCGGCGCTGGCCAAGATGGCGAGCC
TCTCGGAGCTGCCTGTCATCACGACAGCGTCCGTACCTCAAGGGCCGAACGGACCCTTGATTCCTGAAATTCATCAGAAC
GCTCCACACGCCAAGTACGTTGCCCGAAAGGGCGAAATCAGCGCCTGGGACAATCCGGACTTCGTTGCGGCCGTCAAGGC
CACGGGCAAGAAGACGCTGATCATCGCCGGCACGATTACCAGCGTGTGCATGGCCCTCCCGGCCATCGCCGCGGTTCACG
AGGGCTACAGAGTTTTCGTGGTGGTCGATGCGTCGGGCACGTACTCGAAGATGGCCCAGGAGATCACGCTCGCGCGTGTC
GTCCAGGCCGGCGTGGTACCGATCGATACTGCCGGTGTCGCCTCGGAACTGCAGAGGACCTGGAACCGCGCGGACGCCGA
AAAGTGGGCTGAGATCTACACCAAGATATTCCCGCCATATCGGCTCTTGATCGAGAGCTATGCGAAAGCGCAGCAGGTCG
CCAAGGAAGGCGAGCAGCTCGACTCGCAGCGCAAGTAG

Upstream 100 bases:

>100_bases
TGGACGACCACCCGGCGCACAACTCCTCGCCTACGCCCCACCGGCGGGGCGTAGGCGTTCACCTGCATCGGGAATGCTGG
AAGGGGGACGAAAGGTGAAC

Downstream 100 bases:

>100_bases
GCGACGAAAGGAGAATCACAATGGCCAGTGAACCAATTCGTGACCCCGTGAAAGATCAGCTGCTGACCCCCAAGAATTCG
GCGTTCGTCGTCATCGACTA

Product: isochorismatase superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSAANFNGQKPTIDLKDAVMLLIDHQSGLFQTVQDMAMPSLRANAAALAKMASLSELPVITTASVPQGPNGPLIPEIHQN
APHAKYVARKGEISAWDNPDFVAAVKATGKKTLIIAGTITSVCMALPAIAAVHEGYRVFVVVDASGTYSKMAQEITLARV
VQAGVVPIDTAGVASELQRTWNRADAEKWAEIYTKIFPPYRLLIESYAKAQQVAKEGEQLDSQRK

Sequences:

>Translated_225_residues
MSAANFNGQKPTIDLKDAVMLLIDHQSGLFQTVQDMAMPSLRANAAALAKMASLSELPVITTASVPQGPNGPLIPEIHQN
APHAKYVARKGEISAWDNPDFVAAVKATGKKTLIIAGTITSVCMALPAIAAVHEGYRVFVVVDASGTYSKMAQEITLARV
VQAGVVPIDTAGVASELQRTWNRADAEKWAEIYTKIFPPYRLLIESYAKAQQVAKEGEQLDSQRK
>Mature_224_residues
SAANFNGQKPTIDLKDAVMLLIDHQSGLFQTVQDMAMPSLRANAAALAKMASLSELPVITTASVPQGPNGPLIPEIHQNA
PHAKYVARKGEISAWDNPDFVAAVKATGKKTLIIAGTITSVCMALPAIAAVHEGYRVFVVVDASGTYSKMAQEITLARVV
QAGVVPIDTAGVASELQRTWNRADAEKWAEIYTKIFPPYRLLIESYAKAQQVAKEGEQLDSQRK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=195, Percent_Identity=48.2051282051282, Blast_Score=192, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24214; Mature: 24083

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAANFNGQKPTIDLKDAVMLLIDHQSGLFQTVQDMAMPSLRANAAALAKMASLSELPVI
CCCCCCCCCCCCEEHHHHEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
TTASVPQGPNGPLIPEIHQNAPHAKYVARKGEISAWDNPDFVAAVKATGKKTLIIAGTIT
EECCCCCCCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHH
SVCMALPAIAAVHEGYRVFVVVDASGTYSKMAQEITLARVVQAGVVPIDTAGVASELQRT
HHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
WNRADAEKWAEIYTKIFPPYRLLIESYAKAQQVAKEGEQLDSQRK
HHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAANFNGQKPTIDLKDAVMLLIDHQSGLFQTVQDMAMPSLRANAAALAKMASLSELPVI
CCCCCCCCCCCEEHHHHEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
TTASVPQGPNGPLIPEIHQNAPHAKYVARKGEISAWDNPDFVAAVKATGKKTLIIAGTIT
EECCCCCCCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHH
SVCMALPAIAAVHEGYRVFVVVDASGTYSKMAQEITLARVVQAGVVPIDTAGVASELQRT
HHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
WNRADAEKWAEIYTKIFPPYRLLIESYAKAQQVAKEGEQLDSQRK
HHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]