| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ushA [C]
Identifier: 108763240
GI number: 108763240
Start: 2577755
End: 2579608
Strand: Direct
Name: ushA [C]
Synonym: MXAN_2236
Alternate gene names: 108763240
Gene position: 2577755-2579608 (Clockwise)
Preceding gene: 108760682
Following gene: 108762617
Centisome position: 28.2
GC content: 68.07
Gene sequence:
>1854_bases ATGGCGGCCAGCGTGCTGTCCGCGTGTGGTGATGACGATGCCGTCGACCCTGGCGAGCAGCCCGCGCCGCTGGACCTGAC CATCCTCCACATCAACGACCACCACTCGCACCTCGCGGGTTCCAGTCTGGAGCTGAATGTGACGAACGCCGCGGGTGACA CCGTGGCCGCGGAGGTTGAATCCTCGGGTTTCGCGCGCGTCACGTCCGCGATGAAGGAGCTGGCGGCCGGTAAGGAGAAC GTGCTCAAGCTCCACGCGGGTGACGCCCTCACCGGCACGCTGTACTTCAACCGCGCGGGCCAGATTGGCGAGGCCGACGC CGCGATGATGAACACGGTGTGCTTCGACGCCTTCACCCTGGGCAACCACGAGTTCGACAAGGGCGACACCGAGCTGAAGC GCTTCATCGACCGCCTGCATGCCGGCCAGTGTCAGACGCCCGTCATCAGCGCCAACGTCCAGTTCGGCGCGGGCTCCGCC CTGCACACCTCCAGGGCTGCCGGCTACGTGGAGCCCTTCACCGTCGTCGAACGGGGGGGCCAGAAGATTGGCCTCGTCGG CCTGACGATTGCGGGCAAGACGAAGGAGTCCTCCAGCCCGGATGCGGACACCACGTTCGAGGCCGAGGTGCCCGCCGCCC AGCGCGCCATCGATGCGCTGCGGGCCCAGGGCATCAACAAGATCATCGTGATGAGCCACATCGGGTACCAGCTCGACCGG ACCATCATCCCGCAGTTGAGTGGCGTGGACGCGGTCATCGGCGGTGACTCCCACACACTGCTGGGGCCTGCCGCCATGGA GACCTTCAACGTCGGAACGCCCGCGGGGCCCTACGCGGAGTCGCTGCGCAACCGCGACGGCGAAACCGTGTGCCTGGGGC AGGCCTGGCAGTACTCGCAGGTCGTCGGAGAGATGACCCTCCGCTTCGACGCCGAGGGCGTGGTCACCTCCTGTGGCGGC ACGCCCCACGTACTCATCGGCAATCAGTTCTCCATTGACGGGACGCCCGTCTCCGAATCCGACAACGCCGCGATGCTGGC CAGCGTGGCCGTCAGCGGCTTCCTGCGGGTGACGCAGCCGGATGCCGCCGCCGCGCAGGTGCTGGCGCCGTTCCAGGGCC GGATCGACGAGTACAGCCGGACGGTGGTGGCCACGGCGGACGACGAGCTTTGCAATCGCCGCGTGCCGGGAAACACGGAG CCGGGCCGCTCCAGCGTGAGCTGCAACGCCCTGGGGGAGGTCCACAGCCGGGGCGGCGACATCCAGCAACTGGTGGCGCA GGCCTACCTGGAGGTGGCGAACGCGGATTACGGCGGCGCGGACATCACGTTGCAGAGCGCGGGCGGCGTGCGCCGGCCGC TGCAGGGACCGGTGACGGCGGCGGACGTCATCGAGGTGCTGCCCTTCGGCAACATGCTGTTCCGGCTGGACGTCACTGGC ACCGAGGTGAAGTCGATGATTGAGGACGGGCTGCACGCCACGTTCCGGGAGGGAGGCACCACGGGGCCCTATCCGTACAC CGGCGGCCTGCGCTTCGACGTCAACGCCGCTCACGCTCGCGGCCAGCGCGCCAGCAACCTGGAGGTGCTGGACCAGACGA CGGGCCAGTGGAACGAACTTCAGCCGACCGCCACCTATCGCCTGTTCGTGCTGAGCTTCAATGCCACGGGTGGTGATGGC TACGTGACGCTGGCCAACGTGCCGGCCGAGCGCCGCTCCGACATCGGCGTGCTCGATGCCGACGTCCTCCAGACGTACAT CGACCGTCAGGCCGAGCGCAAGCCCGGCACGAACCTGCCCGTCCTGCACAAGGTGGATGCTTCGCTCTACAGCACGAAGT CGTTCGTCGAGTAG
Upstream 100 bases:
>100_bases GAAAGGCACCTGGGAGCGGTTCATGCGATTGAAGACGGAGATGGAAGTGCGCAGGGGGGCGCGTTCGTCGAGCCGGACGC GCTGGTTGACGGTGACGTGG
Downstream 100 bases:
>100_bases CGCGTCGAAGAGACACGCCCGCCTGTCATCAGCAAGTGAAGCAGTTGTCCCGTGGCGGACGTCGCATCCGCCACGGGACG TGCCCTCGATGCGTCACTTC
Product: putative 5'-nucleotidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MAASVLSACGDDDAVDPGEQPAPLDLTILHINDHHSHLAGSSLELNVTNAAGDTVAAEVESSGFARVTSAMKELAAGKEN VLKLHAGDALTGTLYFNRAGQIGEADAAMMNTVCFDAFTLGNHEFDKGDTELKRFIDRLHAGQCQTPVISANVQFGAGSA LHTSRAAGYVEPFTVVERGGQKIGLVGLTIAGKTKESSSPDADTTFEAEVPAAQRAIDALRAQGINKIIVMSHIGYQLDR TIIPQLSGVDAVIGGDSHTLLGPAAMETFNVGTPAGPYAESLRNRDGETVCLGQAWQYSQVVGEMTLRFDAEGVVTSCGG TPHVLIGNQFSIDGTPVSESDNAAMLASVAVSGFLRVTQPDAAAAQVLAPFQGRIDEYSRTVVATADDELCNRRVPGNTE PGRSSVSCNALGEVHSRGGDIQQLVAQAYLEVANADYGGADITLQSAGGVRRPLQGPVTAADVIEVLPFGNMLFRLDVTG TEVKSMIEDGLHATFREGGTTGPYPYTGGLRFDVNAAHARGQRASNLEVLDQTTGQWNELQPTATYRLFVLSFNATGGDG YVTLANVPAERRSDIGVLDADVLQTYIDRQAERKPGTNLPVLHKVDASLYSTKSFVE
Sequences:
>Translated_617_residues MAASVLSACGDDDAVDPGEQPAPLDLTILHINDHHSHLAGSSLELNVTNAAGDTVAAEVESSGFARVTSAMKELAAGKEN VLKLHAGDALTGTLYFNRAGQIGEADAAMMNTVCFDAFTLGNHEFDKGDTELKRFIDRLHAGQCQTPVISANVQFGAGSA LHTSRAAGYVEPFTVVERGGQKIGLVGLTIAGKTKESSSPDADTTFEAEVPAAQRAIDALRAQGINKIIVMSHIGYQLDR TIIPQLSGVDAVIGGDSHTLLGPAAMETFNVGTPAGPYAESLRNRDGETVCLGQAWQYSQVVGEMTLRFDAEGVVTSCGG TPHVLIGNQFSIDGTPVSESDNAAMLASVAVSGFLRVTQPDAAAAQVLAPFQGRIDEYSRTVVATADDELCNRRVPGNTE PGRSSVSCNALGEVHSRGGDIQQLVAQAYLEVANADYGGADITLQSAGGVRRPLQGPVTAADVIEVLPFGNMLFRLDVTG TEVKSMIEDGLHATFREGGTTGPYPYTGGLRFDVNAAHARGQRASNLEVLDQTTGQWNELQPTATYRLFVLSFNATGGDG YVTLANVPAERRSDIGVLDADVLQTYIDRQAERKPGTNLPVLHKVDASLYSTKSFVE >Mature_616_residues AASVLSACGDDDAVDPGEQPAPLDLTILHINDHHSHLAGSSLELNVTNAAGDTVAAEVESSGFARVTSAMKELAAGKENV LKLHAGDALTGTLYFNRAGQIGEADAAMMNTVCFDAFTLGNHEFDKGDTELKRFIDRLHAGQCQTPVISANVQFGAGSAL HTSRAAGYVEPFTVVERGGQKIGLVGLTIAGKTKESSSPDADTTFEAEVPAAQRAIDALRAQGINKIIVMSHIGYQLDRT IIPQLSGVDAVIGGDSHTLLGPAAMETFNVGTPAGPYAESLRNRDGETVCLGQAWQYSQVVGEMTLRFDAEGVVTSCGGT PHVLIGNQFSIDGTPVSESDNAAMLASVAVSGFLRVTQPDAAAAQVLAPFQGRIDEYSRTVVATADDELCNRRVPGNTEP GRSSVSCNALGEVHSRGGDIQQLVAQAYLEVANADYGGADITLQSAGGVRRPLQGPVTAADVIEVLPFGNMLFRLDVTGT EVKSMIEDGLHATFREGGTTGPYPYTGGLRFDVNAAHARGQRASNLEVLDQTTGQWNELQPTATYRLFVLSFNATGGDGY VTLANVPAERRSDIGVLDADVLQTYIDRQAERKPGTNLPVLHKVDASLYSTKSFVE
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=586, Percent_Identity=27.6450511945392, Blast_Score=177, Evalue=4e-44, Organism=Escherichia coli, GI1786687, Length=596, Percent_Identity=26.006711409396, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI28573524, Length=548, Percent_Identity=28.1021897810219, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI19922446, Length=549, Percent_Identity=26.9581056466302, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24654424, Length=549, Percent_Identity=26.9581056466302, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI19922444, Length=570, Percent_Identity=27.5438596491228, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24641187, Length=597, Percent_Identity=26.9681742043551, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI221329836, Length=599, Percent_Identity=24.3739565943239, Blast_Score=119, Evalue=7e-27,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 65050; Mature: 64919
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00785 5_NUCLEOTIDASE_1 ; PS00786 5_NUCLEOTIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASVLSACGDDDAVDPGEQPAPLDLTILHINDHHSHLAGSSLELNVTNAAGDTVAAEVE CCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECC SSGFARVTSAMKELAAGKENVLKLHAGDALTGTLYFNRAGQIGEADAAMMNTVCFDAFTL CCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHEEEC GNHEFDKGDTELKRFIDRLHAGQCQTPVISANVQFGAGSALHTSRAAGYVEPFTVVERGG CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCHHHHHCCC QKIGLVGLTIAGKTKESSSPDADTTFEAEVPAAQRAIDALRAQGINKIIVMSHIGYQLDR CEEEEEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHCH TIIPQLSGVDAVIGGDSHTLLGPAAMETFNVGTPAGPYAESLRNRDGETVCLGQAWQYSQ HHCCCCCCCEEEECCCCCEEECHHHHHEECCCCCCCHHHHHHHCCCCCEEEECCCCHHHH VVGEMTLRFDAEGVVTSCGGTPHVLIGNQFSIDGTPVSESDNAAMLASVAVSGFLRVTQP HHHHEEEEECCCCEEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHCEEEEECC DAAAAQVLAPFQGRIDEYSRTVVATADDELCNRRVPGNTEPGRSSVSCNALGEVHSRGGD CHHHHHHHCCHHHCHHHHCCEEEEECCHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCC IQQLVAQAYLEVANADYGGADITLQSAGGVRRPLQGPVTAADVIEVLPFGNMLFRLDVTG HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCH TEVKSMIEDGLHATFREGGTTGPYPYTGGLRFDVNAAHARGQRASNLEVLDQTTGQWNEL HHHHHHHHHCHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCHHHCCCCCCCCC QPTATYRLFVLSFNATGGDGYVTLANVPAERRSDIGVLDADVLQTYIDRQAERKPGTNLP CCCEEEEEEEEEEECCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC VLHKVDASLYSTKSFVE EEEECCCHHHHHHHHCC >Mature Secondary Structure AASVLSACGDDDAVDPGEQPAPLDLTILHINDHHSHLAGSSLELNVTNAAGDTVAAEVE CCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECC SSGFARVTSAMKELAAGKENVLKLHAGDALTGTLYFNRAGQIGEADAAMMNTVCFDAFTL CCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHEEEC GNHEFDKGDTELKRFIDRLHAGQCQTPVISANVQFGAGSALHTSRAAGYVEPFTVVERGG CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCHHHHHCCC QKIGLVGLTIAGKTKESSSPDADTTFEAEVPAAQRAIDALRAQGINKIIVMSHIGYQLDR CEEEEEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHCH TIIPQLSGVDAVIGGDSHTLLGPAAMETFNVGTPAGPYAESLRNRDGETVCLGQAWQYSQ HHCCCCCCCEEEECCCCCEEECHHHHHEECCCCCCCHHHHHHHCCCCCEEEECCCCHHHH VVGEMTLRFDAEGVVTSCGGTPHVLIGNQFSIDGTPVSESDNAAMLASVAVSGFLRVTQP HHHHEEEEECCCCEEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHCEEEEECC DAAAAQVLAPFQGRIDEYSRTVVATADDELCNRRVPGNTEPGRSSVSCNALGEVHSRGGD CHHHHHHHCCHHHCHHHHCCEEEEECCHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCC IQQLVAQAYLEVANADYGGADITLQSAGGVRRPLQGPVTAADVIEVLPFGNMLFRLDVTG HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCH TEVKSMIEDGLHATFREGGTTGPYPYTGGLRFDVNAAHARGQRASNLEVLDQTTGQWNEL HHHHHHHHHCHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCHHHCCCCCCCCC QPTATYRLFVLSFNATGGDGYVTLANVPAERRSDIGVLDADVLQTYIDRQAERKPGTNLP CCCEEEEEEEEEEECCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC VLHKVDASLYSTKSFVE EEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]