| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762322
Identifier: 108762322
GI number: 108762322
Start: 3454624
End: 3456357
Strand: Direct
Name: 108762322
Synonym: MXAN_2946
Alternate gene names: NA
Gene position: 3454624-3456357 (Clockwise)
Preceding gene: 108759021
Following gene: 108762176
Centisome position: 37.8
GC content: 73.88
Gene sequence:
>1734_bases ATGTTGGCGCGACTGCTCCGAGCCGATGAACCTTCCGTCCATGCCCGCGCGCCGTGGGAGGATGTCGCGGATGACGCGCT CCCCACGCCGCTCCTGCGCGAGGGCCTGGGGCACGCGCACCTGGGCGTCACCACCACCAGGCCCCAGGCCCAGGCCTGGT TCGACCAGGGCCTGCGGCTGTTGCACCTGGGGTGGGGCGGTGAAGCCCGCCGCGCCTTCGCGCAGGCCACGCGCGAGGAT TCATCGCTGGCCATGGCCTGGTGGGGGCTCGCCCTCACGCGAGGCTCCGGTGCCCGCTTCGCCACCGCCCGCGCGGAGGC CATGAGCCGCGCGCTGGCCCTGAGCGAGGGCACCACGGACCGCGAGCAGCGCTACATCGTCGCGGGCAGTCTGCTGGCGG AGAAGGGGCCGGCCAATGGGCGCAACGCCTTCGTGCGTGACATGGAGTGCCTCATCGACCGCTATCCCGAGGACGGCGAC GCGCGGCTGCTGCTCGCGGGATTCCTCCTGGACGGCTACGAGCCGGATGGCCGGCCCGGACAGGGGCAGCCGTATGCACA GGCCCTGCTGCGCGAGCTGCTGCGCTCACACCCGGACCACGCGGGCGTCCACCATGCATGGGTGCAGGCCATGCTGAACA GCGGCCGGCCCGAGGCTGCCCGTGACAGTGCTCACCGCCTGGTGGCGCTGGCGCCTCGTGCCGGCCCCGCGCTGCTCTCC GCGGGGCGCCTGCTTCAGCGGGTTGGGCTGGTGGCGGAGGCCCGGCGCGTGCTGGAGGCCACGGTGGCCGCGGACGATGC GTACCTGGCCGAGGAAGGACTGCACACCGCCGACGCGCCGAGTGCCGAGGCGGCCATGCGGCTGCTCAGTCAGGGCTGCG CCGAAGCGGGCCAGTACGGCGAGTCCCAGGCGTGGGCCCGTCGCCTGCGGCAGCGGGTGGAAGGTGCTGGAGGTGACGAC CAGGCGCTGCTGTTCGCCGCAGCCACGATGGTGTCCGCGCACCTGCGCTTCGGCTTCTGGCGTGCGGCGGCGGACGTGCC CATGGAGCTGTCTGATACGGCCAGCCCTGCGGAGCGGGCGCTGCGGGACGGGATGCGCCAGTACACGAGAGGACTCAGCC TGCTCGAGGCCGCGCGGCTGGGCGAGGTGGAGCGGGTATGTAACTCACTGGATGCGCAGCATGCGCTCCTGGCGGAGGCT CGCCGCTCGGAGGACCTGGCCCTGTGTCCACGAGATGTGGCGCGGGTGGTGGAGGTGGCCGCTCATGAGCTGCGTGGCGC GCTGGAGGTTCGCAGGGGCGAGGTGGGCCGCGCCGAGGCCACGCTGACGCGTGCGTGGCGGCTGGAGCGGCGGCTTCGGG CCGCAGGGCCGGCGGCCTTCTCCCGGCCCGCGCGCGAGGCACTGGTCCGGCTGCGTCTGCGCACGGAACGCGAGGACAAG GCGGTGGGGCTGGCGAAGACGCTGGTGGCGGAGCGGCCTGGGTGCGGGCACTTGCGACTGCTGTCCGCGGAGTCCCAGGT GGCGCTCGGCGCTTGGAGCAGCGCGGTGGAGGACTTCGCCGCGTTCCTCGACTGCTGGCGTGACGCGGACCCGCATCAGC CGGAGCTTCGCCGCGCTCGGGCCTTCATCGCCGGGCGGGGGCGCCTGCTGCGGCTCGTGCGCCCGCCGGAGCTCCTTGCC CTACGAGAGACCGGGGCCCCGGCCCTCGCTGCGCATGGGACGGTGTCCTGCTGA
Upstream 100 bases:
>100_bases CTGGCCTCGGCGTGGCGGCGCTTCGCTTCCCGCCTTCGTTCCCTGGATTCTGGATTCAACGTCTGCACCGCCCCGGTCGC CGGGGCCTGAGGAGGCCATC
Downstream 100 bases:
>100_bases GCGGTGCCCGAATGGCACGGGGGCTGCCACCTGCCGGCAATTCCCATCAATCATGAGCCCGGCCCACGCGGCTCATTGCC CGCGCGTCGCGGGTTGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Repeat Family; TPR Domain Protein; Redoxin Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MLARLLRADEPSVHARAPWEDVADDALPTPLLREGLGHAHLGVTTTRPQAQAWFDQGLRLLHLGWGGEARRAFAQATRED SSLAMAWWGLALTRGSGARFATARAEAMSRALALSEGTTDREQRYIVAGSLLAEKGPANGRNAFVRDMECLIDRYPEDGD ARLLLAGFLLDGYEPDGRPGQGQPYAQALLRELLRSHPDHAGVHHAWVQAMLNSGRPEAARDSAHRLVALAPRAGPALLS AGRLLQRVGLVAEARRVLEATVAADDAYLAEEGLHTADAPSAEAAMRLLSQGCAEAGQYGESQAWARRLRQRVEGAGGDD QALLFAAATMVSAHLRFGFWRAAADVPMELSDTASPAERALRDGMRQYTRGLSLLEAARLGEVERVCNSLDAQHALLAEA RRSEDLALCPRDVARVVEVAAHELRGALEVRRGEVGRAEATLTRAWRLERRLRAAGPAAFSRPAREALVRLRLRTEREDK AVGLAKTLVAERPGCGHLRLLSAESQVALGAWSSAVEDFAAFLDCWRDADPHQPELRRARAFIAGRGRLLRLVRPPELLA LRETGAPALAAHGTVSC
Sequences:
>Translated_577_residues MLARLLRADEPSVHARAPWEDVADDALPTPLLREGLGHAHLGVTTTRPQAQAWFDQGLRLLHLGWGGEARRAFAQATRED SSLAMAWWGLALTRGSGARFATARAEAMSRALALSEGTTDREQRYIVAGSLLAEKGPANGRNAFVRDMECLIDRYPEDGD ARLLLAGFLLDGYEPDGRPGQGQPYAQALLRELLRSHPDHAGVHHAWVQAMLNSGRPEAARDSAHRLVALAPRAGPALLS AGRLLQRVGLVAEARRVLEATVAADDAYLAEEGLHTADAPSAEAAMRLLSQGCAEAGQYGESQAWARRLRQRVEGAGGDD QALLFAAATMVSAHLRFGFWRAAADVPMELSDTASPAERALRDGMRQYTRGLSLLEAARLGEVERVCNSLDAQHALLAEA RRSEDLALCPRDVARVVEVAAHELRGALEVRRGEVGRAEATLTRAWRLERRLRAAGPAAFSRPAREALVRLRLRTEREDK AVGLAKTLVAERPGCGHLRLLSAESQVALGAWSSAVEDFAAFLDCWRDADPHQPELRRARAFIAGRGRLLRLVRPPELLA LRETGAPALAAHGTVSC >Mature_577_residues MLARLLRADEPSVHARAPWEDVADDALPTPLLREGLGHAHLGVTTTRPQAQAWFDQGLRLLHLGWGGEARRAFAQATRED SSLAMAWWGLALTRGSGARFATARAEAMSRALALSEGTTDREQRYIVAGSLLAEKGPANGRNAFVRDMECLIDRYPEDGD ARLLLAGFLLDGYEPDGRPGQGQPYAQALLRELLRSHPDHAGVHHAWVQAMLNSGRPEAARDSAHRLVALAPRAGPALLS AGRLLQRVGLVAEARRVLEATVAADDAYLAEEGLHTADAPSAEAAMRLLSQGCAEAGQYGESQAWARRLRQRVEGAGGDD QALLFAAATMVSAHLRFGFWRAAADVPMELSDTASPAERALRDGMRQYTRGLSLLEAARLGEVERVCNSLDAQHALLAEA RRSEDLALCPRDVARVVEVAAHELRGALEVRRGEVGRAEATLTRAWRLERRLRAAGPAAFSRPAREALVRLRLRTEREDK AVGLAKTLVAERPGCGHLRLLSAESQVALGAWSSAVEDFAAFLDCWRDADPHQPELRRARAFIAGRGRLLRLVRPPELLA LRETGAPALAAHGTVSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62591; Mature: 62591
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARLLRADEPSVHARAPWEDVADDALPTPLLREGLGHAHLGVTTTRPQAQAWFDQGLRL CCHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCEECCCCHHHHHHHCCCEE LHLGWGGEARRAFAQATREDSSLAMAWWGLALTRGSGARFATARAEAMSRALALSEGTTD EEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC REQRYIVAGSLLAEKGPANGRNAFVRDMECLIDRYPEDGDARLLLAGFLLDGYEPDGRPG HHHEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCC QGQPYAQALLRELLRSHPDHAGVHHAWVQAMLNSGRPEAARDSAHRLVALAPRAGPALLS CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCHHHHH AGRLLQRVGLVAEARRVLEATVAADDAYLAEEGLHTADAPSAEAAMRLLSQGCAEAGQYG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC ESQAWARRLRQRVEGAGGDDQALLFAAATMVSAHLRFGFWRAAADVPMELSDTASPAERA CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LRDGMRQYTRGLSLLEAARLGEVERVCNSLDAQHALLAEARRSEDLALCPRDVARVVEVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AHELRGALEVRRGEVGRAEATLTRAWRLERRLRAAGPAAFSRPAREALVRLRLRTEREDK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCHHH AVGLAKTLVAERPGCGHLRLLSAESQVALGAWSSAVEDFAAFLDCWRDADPHQPELRRAR HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AFIAGRGRLLRLVRPPELLALRETGAPALAAHGTVSC HHHHCCCCEEEEECCCHHEEECCCCCCCEECCCCCCC >Mature Secondary Structure MLARLLRADEPSVHARAPWEDVADDALPTPLLREGLGHAHLGVTTTRPQAQAWFDQGLRL CCHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCEECCCCHHHHHHHCCCEE LHLGWGGEARRAFAQATREDSSLAMAWWGLALTRGSGARFATARAEAMSRALALSEGTTD EEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC REQRYIVAGSLLAEKGPANGRNAFVRDMECLIDRYPEDGDARLLLAGFLLDGYEPDGRPG HHHEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCC QGQPYAQALLRELLRSHPDHAGVHHAWVQAMLNSGRPEAARDSAHRLVALAPRAGPALLS CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCHHHHH AGRLLQRVGLVAEARRVLEATVAADDAYLAEEGLHTADAPSAEAAMRLLSQGCAEAGQYG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC ESQAWARRLRQRVEGAGGDDQALLFAAATMVSAHLRFGFWRAAADVPMELSDTASPAERA CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LRDGMRQYTRGLSLLEAARLGEVERVCNSLDAQHALLAEARRSEDLALCPRDVARVVEVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AHELRGALEVRRGEVGRAEATLTRAWRLERRLRAAGPAAFSRPAREALVRLRLRTEREDK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCHHH AVGLAKTLVAERPGCGHLRLLSAESQVALGAWSSAVEDFAAFLDCWRDADPHQPELRRAR HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AFIAGRGRLLRLVRPPELLALRETGAPALAAHGTVSC HHHHCCCCEEEEECCCHHEEECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA