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The map label for this gene is ycaC [C]

Identifier: 108762176

GI number: 108762176

Start: 3456554

End: 3457105

Strand: Direct

Name: ycaC [C]

Synonym: MXAN_2947

Alternate gene names: 108762176

Gene position: 3456554-3457105 (Clockwise)

Preceding gene: 108762322

Following gene: 108757451

Centisome position: 37.82

GC content: 71.74

Gene sequence:

>552_bases
ATGCCCACCTTCCGCCTCAAGCAGGACCAGGCCGCGTTGCTCGTCGTGGACATCCAGGAGCGACTGTGCGCCGCCATGGA
CCGGGACGCGCTGGACCGGATGCTCAGCCGCACCACCGCCGCCATCGAGGGCGCTCGCGCGCTGGGGCTCCCCATCCTCC
TCACCGAGCAGTACCCCCAGGGCCTGGGGCCCACGCATTCGCTGCTGCGGATGCGGGTGCTGAAGGACGTCAAGGCGGTG
GAGAAGCTGGAGTTCAGCGCCGCCGTGCCAGACGTGCTGGCCGCGCTCGGCGGGCGCACGCAGGTGCTGGTGGCGGGCAT
GGAGACGCACATCTGCGTCTTCCAGACGGTGCGCGACCTGGCCGAACGCGGTCTGTCCCCGTTCCTGCTTACGGACGCCG
TGCTGTCGCGCGCGCAGGAGGACCGGCAGGTGGGCCTCCAGTTGTGCCGTGACGCGGGCGCGCACGTCGTCACGGTGGAG
GCCGCGCTGTTCGACCTGCTCGGGCGCGCCGGCACGCCCGAGTTCAAGCAGGTCTCCGCGGCGGTCCGCTGA

Upstream 100 bases:

>100_bases
ACTGTCACCCGCTGGAAGTCCTCGCCGTGCGGGCGTCCACCAGTCGCGCTGGCGGCTCCCGCCGCTTGACGGGCCCTCAC
CGTTCGCGCGAGGAGGGGGC

Downstream 100 bases:

>100_bases
CCCTCAGCGCGCCTTCTGTACCGCGTGGACGAGCATTCGCAGGACGGTCGCCACGGCCACCATGGCCGCGGCGAACACCG
TCTGCGAGCCGCCCACGGGG

Product: isochorismatase family protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Isochorismatase; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MPTFRLKQDQAALLVVDIQERLCAAMDRDALDRMLSRTTAAIEGARALGLPILLTEQYPQGLGPTHSLLRMRVLKDVKAV
EKLEFSAAVPDVLAALGGRTQVLVAGMETHICVFQTVRDLAERGLSPFLLTDAVLSRAQEDRQVGLQLCRDAGAHVVTVE
AALFDLLGRAGTPEFKQVSAAVR

Sequences:

>Translated_183_residues
MPTFRLKQDQAALLVVDIQERLCAAMDRDALDRMLSRTTAAIEGARALGLPILLTEQYPQGLGPTHSLLRMRVLKDVKAV
EKLEFSAAVPDVLAALGGRTQVLVAGMETHICVFQTVRDLAERGLSPFLLTDAVLSRAQEDRQVGLQLCRDAGAHVVTVE
AALFDLLGRAGTPEFKQVSAAVR
>Mature_182_residues
PTFRLKQDQAALLVVDIQERLCAAMDRDALDRMLSRTTAAIEGARALGLPILLTEQYPQGLGPTHSLLRMRVLKDVKAVE
KLEFSAAVPDVLAALGGRTQVLVAGMETHICVFQTVRDLAERGLSPFLLTDAVLSRAQEDRQVGLQLCRDAGAHVVTVEA
ALFDLLGRAGTPEFKQVSAAVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=182, Percent_Identity=33.5164835164835, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI209969695, Length=182, Percent_Identity=34.0659340659341, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI13376007, Length=198, Percent_Identity=31.3131313131313, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17540156, Length=174, Percent_Identity=35.0574712643678, Blast_Score=117, Evalue=4e-27,
Organism=Drosophila melanogaster, GI21357489, Length=185, Percent_Identity=29.7297297297297, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI19922924, Length=184, Percent_Identity=32.0652173913043, Blast_Score=94, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19844; Mature: 19713

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFRLKQDQAALLVVDIQERLCAAMDRDALDRMLSRTTAAIEGARALGLPILLTEQYPQ
CCCCCCCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
GLGPTHSLLRMRVLKDVKAVEKLEFSAAVPDVLAALGGRTQVLVAGMETHICVFQTVRDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
AERGLSPFLLTDAVLSRAQEDRQVGLQLCRDAGAHVVTVEAALFDLLGRAGTPEFKQVSA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHHHHH
AVR
HCC
>Mature Secondary Structure 
PTFRLKQDQAALLVVDIQERLCAAMDRDALDRMLSRTTAAIEGARALGLPILLTEQYPQ
CCCCCCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
GLGPTHSLLRMRVLKDVKAVEKLEFSAAVPDVLAALGGRTQVLVAGMETHICVFQTVRDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
AERGLSPFLLTDAVLSRAQEDRQVGLQLCRDAGAHVVTVEAALFDLLGRAGTPEFKQVSA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHHHHH
AVR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA