| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762285
Identifier: 108762285
GI number: 108762285
Start: 3250304
End: 3251443
Strand: Direct
Name: 108762285
Synonym: MXAN_2793
Alternate gene names: NA
Gene position: 3250304-3251443 (Clockwise)
Preceding gene: 108763300
Following gene: 108759834
Centisome position: 35.56
GC content: 65.7
Gene sequence:
>1140_bases GTGCGGACTGGAGGCGTCATGCACCTTGTGAGATTTCGTCGGCTGCCCGCGCTCGTGCTTCTCGGACTTTCCTTCGCCGG TGGGATGGGGTGCTCGGAGGACGACGGGGGTGTGGACACGCCCAACCCCCTGACGAATCCCAAGGATGGGCCTCCCGCCG GGAATCAGAACCCGGAGGCCACGTGCGCCATCCCGGCCGAGGCTGGCCTCGCGGATGTCGCCCGGCCCACCACGGTCGTC GGCACGGGCAGTCCGGAGAGCTGTACCAGTGACGCGTTCATCCAGGCCGTGGCGCGGGGCGGGGTCATCACCTTCGACTG CGGTCCCGAGCCCGTCACCATCACCCTGGAGCGGACGGCGAAGATCTTCAACGACACGGGGCCGGAGATCGTCATCGACG GCAAGGGGTTGGTGACGCTGAGCGGGGCGGGGCGGCACCGCATCCTGTACATGAACACCTGCGACCGGGATCAGGTGTGG ACGACGGCGCACTGCCAGGACCAGGACCACCCTCGGCTGACGCTGCAGAACCTGACGTTCGTGGATGCCAGCTCCAAGAC GGAGGCCGAGTTCGACGGCGGCGGCGCGGTCTGGGTGCGCGGCGGGCGCTTGAAGGTCATCAACTCCCGGTTCTTCAACA ACGTCTGCTCGGATGTGGGACCGGACGTGGGCGGCGCCGCGCTCCGTGCGTTCAGCCAGCACCGGAACCAGCCCGTGTAC GTGGTGAACACGACCTTCGGGGGCAAGGCTGGTTACGGCGGTGCCTGCTCCAACGGCGGTGGCATCAGCAGCATCGGCGT GTCCTGGACCATCATCAACAGCCTGTTCTCCCACAACCGGGCCGTCGGCAATGGCGCCAATCCCGCGCGGCCGGGAACTC CGGGAGGGGGCAGTGGCGGAGCCATCTACAACGATGGGAACACGATGACGCTGTCACTTTGTGGCACCCGGATTGAGCAC AACGAGGTCAATGCGCACGGCAGCGCCATCTTCTTCGTGAGCAATGACCACTCGGGAGATATCCGCATCGACCGCTCCGT GATTCGGAACAATACGGGCGGGTCGTGGTACCCGACGCATCCACAGATTTCGAATCACGATGACACGCCCATCGTCGTGA CGAACTCCACGATTGAGTGA
Upstream 100 bases:
>100_bases GATCGTCCAGTGGGGCCCGTGGCTCGGCGGGCAGCCGTGACGGTTCGGTAGCCTCCAGAAAGAGGCCCCGGGGCCATTGC GCTGAGCGGAGCTACACTGG
Downstream 100 bases:
>100_bases CCAATCGCCCGCCTGCCGCGCAGCCACGCCGCCTCGCGTCTGAAGAGCGCAGGGCGGAGAAGGCAGATGGTCCCCCCGTC GTAGGCCACCCAGCCACAAC
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Polymorphic Membrane Protein Chlamydia; Polymorphic Membrane Protein; Extracellular Nuclease
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRTGGVMHLVRFRRLPALVLLGLSFAGGMGCSEDDGGVDTPNPLTNPKDGPPAGNQNPEATCAIPAEAGLADVARPTTVV GTGSPESCTSDAFIQAVARGGVITFDCGPEPVTITLERTAKIFNDTGPEIVIDGKGLVTLSGAGRHRILYMNTCDRDQVW TTAHCQDQDHPRLTLQNLTFVDASSKTEAEFDGGGAVWVRGGRLKVINSRFFNNVCSDVGPDVGGAALRAFSQHRNQPVY VVNTTFGGKAGYGGACSNGGGISSIGVSWTIINSLFSHNRAVGNGANPARPGTPGGGSGGAIYNDGNTMTLSLCGTRIEH NEVNAHGSAIFFVSNDHSGDIRIDRSVIRNNTGGSWYPTHPQISNHDDTPIVVTNSTIE
Sequences:
>Translated_379_residues MRTGGVMHLVRFRRLPALVLLGLSFAGGMGCSEDDGGVDTPNPLTNPKDGPPAGNQNPEATCAIPAEAGLADVARPTTVV GTGSPESCTSDAFIQAVARGGVITFDCGPEPVTITLERTAKIFNDTGPEIVIDGKGLVTLSGAGRHRILYMNTCDRDQVW TTAHCQDQDHPRLTLQNLTFVDASSKTEAEFDGGGAVWVRGGRLKVINSRFFNNVCSDVGPDVGGAALRAFSQHRNQPVY VVNTTFGGKAGYGGACSNGGGISSIGVSWTIINSLFSHNRAVGNGANPARPGTPGGGSGGAIYNDGNTMTLSLCGTRIEH NEVNAHGSAIFFVSNDHSGDIRIDRSVIRNNTGGSWYPTHPQISNHDDTPIVVTNSTIE >Mature_379_residues MRTGGVMHLVRFRRLPALVLLGLSFAGGMGCSEDDGGVDTPNPLTNPKDGPPAGNQNPEATCAIPAEAGLADVARPTTVV GTGSPESCTSDAFIQAVARGGVITFDCGPEPVTITLERTAKIFNDTGPEIVIDGKGLVTLSGAGRHRILYMNTCDRDQVW TTAHCQDQDHPRLTLQNLTFVDASSKTEAEFDGGGAVWVRGGRLKVINSRFFNNVCSDVGPDVGGAALRAFSQHRNQPVY VVNTTFGGKAGYGGACSNGGGISSIGVSWTIINSLFSHNRAVGNGANPARPGTPGGGSGGAIYNDGNTMTLSLCGTRIEH NEVNAHGSAIFFVSNDHSGDIRIDRSVIRNNTGGSWYPTHPQISNHDDTPIVVTNSTIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39644; Mature: 39644
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGGVMHLVRFRRLPALVLLGLSFAGGMGCSEDDGGVDTPNPLTNPKDGPPAGNQNPEA CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TCAIPAEAGLADVARPTTVVGTGSPESCTSDAFIQAVARGGVITFDCGPEPVTITLERTA EEECCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEEHHH KIFNDTGPEIVIDGKGLVTLSGAGRHRILYMNTCDRDQVWTTAHCQDQDHPRLTLQNLTF HHHCCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEEE VDASSKTEAEFDGGGAVWVRGGRLKVINSRFFNNVCSDVGPDVGGAALRAFSQHRNQPVY EECCCCCCCEECCCCEEEEECCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEE VVNTTFGGKAGYGGACSNGGGISSIGVSWTIINSLFSHNRAVGNGANPARPGTPGGGSGG EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AIYNDGNTMTLSLCGTRIEHNEVNAHGSAIFFVSNDHSGDIRIDRSVIRNNTGGSWYPTH CEEECCCEEEEEEECCEEECCCCCCCCCEEEEEECCCCCCEEEEHHHHHCCCCCCCCCCC PQISNHDDTPIVVTNSTIE CCCCCCCCCCEEEECCCCC >Mature Secondary Structure MRTGGVMHLVRFRRLPALVLLGLSFAGGMGCSEDDGGVDTPNPLTNPKDGPPAGNQNPEA CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TCAIPAEAGLADVARPTTVVGTGSPESCTSDAFIQAVARGGVITFDCGPEPVTITLERTA EEECCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEEHHH KIFNDTGPEIVIDGKGLVTLSGAGRHRILYMNTCDRDQVWTTAHCQDQDHPRLTLQNLTF HHHCCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEEE VDASSKTEAEFDGGGAVWVRGGRLKVINSRFFNNVCSDVGPDVGGAALRAFSQHRNQPVY EECCCCCCCEECCCCEEEEECCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEE VVNTTFGGKAGYGGACSNGGGISSIGVSWTIINSLFSHNRAVGNGANPARPGTPGGGSGG EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AIYNDGNTMTLSLCGTRIEHNEVNAHGSAIFFVSNDHSGDIRIDRSVIRNNTGGSWYPTH CEEECCCEEEEEEECCEEECCCCCCCCCEEEEEECCCCCCEEEEHHHHHCCCCCCCCCCC PQISNHDDTPIVVTNSTIE CCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA