Click here to switch to the map view.

The map label for this gene is snorO [H]

Identifier: 108759834

GI number: 108759834

Start: 3252516

End: 3254765

Strand: Direct

Name: snorO [H]

Synonym: MXAN_2795

Alternate gene names: 108759834

Gene position: 3252516-3254765 (Clockwise)

Preceding gene: 108762285

Following gene: 108759549

Centisome position: 35.59

GC content: 64.89

Gene sequence:

>2250_bases
ATGTACGGCTCCATCAAGATTCGCGGGGCACGCGAGAACAACCTGAAGAATGTCTCGCTCGACATCCCCAAGCGGAAGAT
CACGGTCTTCACGGGCGTCTCGGGTTCGGGCAAGTCATCCCTGGTTTTCGGCACCATCGCGGCTGAGAGCCAGCGGCTCA
TCAACGAGACCTATCCGGCCTTTGTGCAACAGTTCATGCCGCACTACGGCCAGCCGGACGCGGAGAGCCTGGAGAACATC
TCCGCGGCCATCATCGTGGACCAGCAGCGGCTGGGAGGGAACTCACGCTCCACGGTCGCCACCGTCACCGACGCCGCGCA
GATGCTCCGCGTGGTGTTCTCACGCCTCGCCGAGCCGCACCTGGGCAGTCCGGGCTTCTATTCCTACAACGACCCTCGGG
GGCTTTGTTCGGAGTGCGAGGGAATCGGTCAGGTCGCGTCCATGGACATGGACGCCGTCATCGACAAGTCCAAGTCCCTC
AATGAGGGCGCCATCCTGCCCAAGGACTATGCGGTCGACAGTTGGTACTGGGCCATCTACGCACGCTCGGGCTTCTTCGA
CGTCGACAAGAAGCTGTCCAAGTACACGAAGGAGGAGATGGAGAAGCTCCTCCACCTGGACGACGGCCGGAAGATCAAGC
TCGACAAGATGAACCTCACCTACGAGGGCCTTGTCCCCAAGCTGCGCCGGACGCTGGGTGCCAAGGACCCTGAGACGGTC
CAGCCGCACGTCCGCGCCGAATACGAGCGCATCTTCACCCGAGCCACCTGCCCTTCCTGCAAGGGTGGGCGGCTCAACCA
GGCAGCGCTCGGCAGCCACATCCAGGGGAAGAGCATCGCGGAGTGCTCCGCGATGCAGGTGTCGGACCTCGCCGCGTTCG
TCCGGAAGATTGCCGCTCCGTCCGTGGGGCCCATGCTGGAGGCCCTGGCCCACCGGCTCGACAACCTGGTGACCATTGGC
CTGGGGTACCTCAGCCTCGACCGCGAGAGTTCGACGCTGTCGGGTGGAGAGAGCCAGCGGGTGAAGATGGTGCGGCACCT
GGGCTCCAGCCTCACCGATGTGACGTACATCTTCGATGAGCCCAGCGTGGGGCTCCACCCGCACGACGTAGGTCGGCTCG
CGGGCCTGATGCAGCAACTGCGCGACAAGGGCAACACCGTGCTCATCGTGGAGCACAAGCCGGACATGATTGCCATTGCG
GACCATGTGGTCGACATGGGGCCCAAGGCCGGCAACAAGGGTGGACAGGTCGTCTTCGAGGGCACCTACGAGGGGTTGCT
GACCTCGGGCACGCTCACGGGCAACCACATGAAGAAGCACCAGCCGCTGAAGACCACGCCTCGAAAGCCCACGGGGCAGC
TTCAAATCAAGGGCGCCCGGCTCAACAACCTCCAGGACCTGTCCGTTTCGATTCCGCGAGGTGTGCTCACGGTGGTGACG
GGCGTGGCGGGTTCGGGAAAGTCGTCGCTGATTCAGGGCTGCCTGCCCAAGGCGTACCCGGAGACCATCATCATCGACCA
GAACCTGGCTCGGGGCTCGCGCCGCTCCAACACCGCCACGTACACCGGCATCCTCGACAACGTCCGCAAGGCCTTCGCCA
AGGCGAACAAGGTGGATGCCGCGCTGTTCTCCGCCAACTCGAAGGGTGCTTGCCCGGACTGCAGTGGCCTGGGCGTCATC
TACACGGACCTGGCGCACCTGGACCCGATGGTGACCGTCTGCGAGACGTGCGAGGGCAAGCGGTTCACCGAGGAGGTGCT
GGCGCACCGGCTGCGCGGCAAGTCCATCAGCGACGTCTACGAGATGGCCGTCAGTGACGCGGTGGCCTTCTTCACCGAAC
CGGCGATCGCCAAAATCCTCCAGGGGCTGGATGACGTCGGGCTCGGCTACCTCACGCTGGGGCAGCCGCTGTCAACGCTG
TCGGGCGGTGAGCGCCAGCGGTTGAAGCTCGCCGCGGAGCTGGGCCGTTCTGGGAACATCTACGTGCTCGATGAGCCCAC
CACGGGACTGCACATGAACGACGTGGACACGTTGATTGGCCTGTTCGACCGGTTGGTGGATGCCGGGTCGACGGTCATCG
TCATCGAGCACAACCTCGACGTGGTGTCCCGCGCGGACTGGGTCATCGACCTGGGGCCCGGCGCCGGGCATGAGGGCGGA
CAGGTCGTCTTCGAAGGACTTCCGGCTCAGCTCGCCGCGCACCCGCGCTCGCTGACCGGGCAGCACATGGCCCGCCGAGG
CAAGGCGTAA

Upstream 100 bases:

>100_bases
GTTACGGCGTAGCTGAAAAGATGTCGAGCGATTTGCGGGAAGCCTGTTCGTGGACGTGCCGCGTCCGCGGGCAGGGCGTC
ACTCTAAGGAGAGGCCAATC

Downstream 100 bases:

>100_bases
CGGCGGGCCCGCCGGAGCGGCGCGAGACACCTCGCACCGCTCCGGTCGACGCGTACGGCTCCGGCGGCAATGGACGTCTA
CCGGCGGCGGCGCTGCTGCA

Product: nogalamycin resistance protein SnorO

Products: NA

Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]

Number of amino acids: Translated: 749; Mature: 749

Protein sequence:

>749_residues
MYGSIKIRGARENNLKNVSLDIPKRKITVFTGVSGSGKSSLVFGTIAAESQRLINETYPAFVQQFMPHYGQPDAESLENI
SAAIIVDQQRLGGNSRSTVATVTDAAQMLRVVFSRLAEPHLGSPGFYSYNDPRGLCSECEGIGQVASMDMDAVIDKSKSL
NEGAILPKDYAVDSWYWAIYARSGFFDVDKKLSKYTKEEMEKLLHLDDGRKIKLDKMNLTYEGLVPKLRRTLGAKDPETV
QPHVRAEYERIFTRATCPSCKGGRLNQAALGSHIQGKSIAECSAMQVSDLAAFVRKIAAPSVGPMLEALAHRLDNLVTIG
LGYLSLDRESSTLSGGESQRVKMVRHLGSSLTDVTYIFDEPSVGLHPHDVGRLAGLMQQLRDKGNTVLIVEHKPDMIAIA
DHVVDMGPKAGNKGGQVVFEGTYEGLLTSGTLTGNHMKKHQPLKTTPRKPTGQLQIKGARLNNLQDLSVSIPRGVLTVVT
GVAGSGKSSLIQGCLPKAYPETIIIDQNLARGSRRSNTATYTGILDNVRKAFAKANKVDAALFSANSKGACPDCSGLGVI
YTDLAHLDPMVTVCETCEGKRFTEEVLAHRLRGKSISDVYEMAVSDAVAFFTEPAIAKILQGLDDVGLGYLTLGQPLSTL
SGGERQRLKLAAELGRSGNIYVLDEPTTGLHMNDVDTLIGLFDRLVDAGSTVIVIEHNLDVVSRADWVIDLGPGAGHEGG
QVVFEGLPAQLAAHPRSLTGQHMARRGKA

Sequences:

>Translated_749_residues
MYGSIKIRGARENNLKNVSLDIPKRKITVFTGVSGSGKSSLVFGTIAAESQRLINETYPAFVQQFMPHYGQPDAESLENI
SAAIIVDQQRLGGNSRSTVATVTDAAQMLRVVFSRLAEPHLGSPGFYSYNDPRGLCSECEGIGQVASMDMDAVIDKSKSL
NEGAILPKDYAVDSWYWAIYARSGFFDVDKKLSKYTKEEMEKLLHLDDGRKIKLDKMNLTYEGLVPKLRRTLGAKDPETV
QPHVRAEYERIFTRATCPSCKGGRLNQAALGSHIQGKSIAECSAMQVSDLAAFVRKIAAPSVGPMLEALAHRLDNLVTIG
LGYLSLDRESSTLSGGESQRVKMVRHLGSSLTDVTYIFDEPSVGLHPHDVGRLAGLMQQLRDKGNTVLIVEHKPDMIAIA
DHVVDMGPKAGNKGGQVVFEGTYEGLLTSGTLTGNHMKKHQPLKTTPRKPTGQLQIKGARLNNLQDLSVSIPRGVLTVVT
GVAGSGKSSLIQGCLPKAYPETIIIDQNLARGSRRSNTATYTGILDNVRKAFAKANKVDAALFSANSKGACPDCSGLGVI
YTDLAHLDPMVTVCETCEGKRFTEEVLAHRLRGKSISDVYEMAVSDAVAFFTEPAIAKILQGLDDVGLGYLTLGQPLSTL
SGGERQRLKLAAELGRSGNIYVLDEPTTGLHMNDVDTLIGLFDRLVDAGSTVIVIEHNLDVVSRADWVIDLGPGAGHEGG
QVVFEGLPAQLAAHPRSLTGQHMARRGKA
>Mature_749_residues
MYGSIKIRGARENNLKNVSLDIPKRKITVFTGVSGSGKSSLVFGTIAAESQRLINETYPAFVQQFMPHYGQPDAESLENI
SAAIIVDQQRLGGNSRSTVATVTDAAQMLRVVFSRLAEPHLGSPGFYSYNDPRGLCSECEGIGQVASMDMDAVIDKSKSL
NEGAILPKDYAVDSWYWAIYARSGFFDVDKKLSKYTKEEMEKLLHLDDGRKIKLDKMNLTYEGLVPKLRRTLGAKDPETV
QPHVRAEYERIFTRATCPSCKGGRLNQAALGSHIQGKSIAECSAMQVSDLAAFVRKIAAPSVGPMLEALAHRLDNLVTIG
LGYLSLDRESSTLSGGESQRVKMVRHLGSSLTDVTYIFDEPSVGLHPHDVGRLAGLMQQLRDKGNTVLIVEHKPDMIAIA
DHVVDMGPKAGNKGGQVVFEGTYEGLLTSGTLTGNHMKKHQPLKTTPRKPTGQLQIKGARLNNLQDLSVSIPRGVLTVVT
GVAGSGKSSLIQGCLPKAYPETIIIDQNLARGSRRSNTATYTGILDNVRKAFAKANKVDAALFSANSKGACPDCSGLGVI
YTDLAHLDPMVTVCETCEGKRFTEEVLAHRLRGKSISDVYEMAVSDAVAFFTEPAIAKILQGLDDVGLGYLTLGQPLSTL
SGGERQRLKLAAELGRSGNIYVLDEPTTGLHMNDVDTLIGLFDRLVDAGSTVIVIEHNLDVVSRADWVIDLGPGAGHEGG
QVVFEGLPAQLAAHPRSLTGQHMARRGKA

Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h

COG id: COG0178

COG function: function code L; Excinuclease ATPase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI2367343, Length=676, Percent_Identity=36.9822485207101, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR013815
- InterPro:   IPR003593
- InterPro:   IPR004602 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 80833; Mature: 80833

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGSIKIRGARENNLKNVSLDIPKRKITVFTGVSGSGKSSLVFGTIAAESQRLINETYPA
CCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH
FVQQFMPHYGQPDAESLENISAAIIVDQQRLGGNSRSTVATVTDAAQMLRVVFSRLAEPH
HHHHHHHCCCCCCHHHHHCCEEEEEEEHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
LGSPGFYSYNDPRGLCSECEGIGQVASMDMDAVIDKSKSLNEGAILPKDYAVDSWYWAIY
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
ARSGFFDVDKKLSKYTKEEMEKLLHLDDGRKIKLDKMNLTYEGLVPKLRRTLGAKDPETV
ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC
QPHVRAEYERIFTRATCPSCKGGRLNQAALGSHIQGKSIAECSAMQVSDLAAFVRKIAAP
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
SVGPMLEALAHRLDNLVTIGLGYLSLDRESSTLSGGESQRVKMVRHLGSSLTDVTYIFDE
CCCHHHHHHHHHHHCEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECC
PSVGLHPHDVGRLAGLMQQLRDKGNTVLIVEHKPDMIAIADHVVDMGPKAGNKGGQVVFE
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCEEEEE
GTYEGLLTSGTLTGNHMKKHQPLKTTPRKPTGQLQIKGARLNNLQDLSVSIPRGVLTVVT
ECCCCEEECCEECCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHHHH
GVAGSGKSSLIQGCLPKAYPETIIIDQNLARGSRRSNTATYTGILDNVRKAFAKANKVDA
CCCCCCHHHHHHHCCCCCCCCEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
ALFSANSKGACPDCSGLGVIYTDLAHLDPMVTVCETCEGKRFTEEVLAHRLRGKSISDVY
HEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH
EMAVSDAVAFFTEPAIAKILQGLDDVGLGYLTLGQPLSTLSGGERQRLKLAAELGRSGNI
HHHHHHHHHHHCCHHHHHHHHCCHHCCCCEEECCCCHHHHCCCHHHHHHHHHHCCCCCCE
YVLDEPTTGLHMNDVDTLIGLFDRLVDAGSTVIVIEHNLDVVSRADWVIDLGPGAGHEGG
EEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCC
QVVFEGLPAQLAAHPRSLTGQHMARRGKA
EEEEECCCHHHHCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MYGSIKIRGARENNLKNVSLDIPKRKITVFTGVSGSGKSSLVFGTIAAESQRLINETYPA
CCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH
FVQQFMPHYGQPDAESLENISAAIIVDQQRLGGNSRSTVATVTDAAQMLRVVFSRLAEPH
HHHHHHHCCCCCCHHHHHCCEEEEEEEHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
LGSPGFYSYNDPRGLCSECEGIGQVASMDMDAVIDKSKSLNEGAILPKDYAVDSWYWAIY
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
ARSGFFDVDKKLSKYTKEEMEKLLHLDDGRKIKLDKMNLTYEGLVPKLRRTLGAKDPETV
ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC
QPHVRAEYERIFTRATCPSCKGGRLNQAALGSHIQGKSIAECSAMQVSDLAAFVRKIAAP
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
SVGPMLEALAHRLDNLVTIGLGYLSLDRESSTLSGGESQRVKMVRHLGSSLTDVTYIFDE
CCCHHHHHHHHHHHCEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECC
PSVGLHPHDVGRLAGLMQQLRDKGNTVLIVEHKPDMIAIADHVVDMGPKAGNKGGQVVFE
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCEEEEE
GTYEGLLTSGTLTGNHMKKHQPLKTTPRKPTGQLQIKGARLNNLQDLSVSIPRGVLTVVT
ECCCCEEECCEECCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHHHH
GVAGSGKSSLIQGCLPKAYPETIIIDQNLARGSRRSNTATYTGILDNVRKAFAKANKVDA
CCCCCCHHHHHHHCCCCCCCCEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
ALFSANSKGACPDCSGLGVIYTDLAHLDPMVTVCETCEGKRFTEEVLAHRLRGKSISDVY
HEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH
EMAVSDAVAFFTEPAIAKILQGLDDVGLGYLTLGQPLSTLSGGERQRLKLAAELGRSGNI
HHHHHHHHHHHCCHHHHHHHHCCHHCCCCEEECCCCHHHHCCCHHHHHHHHHHCCCCCCE
YVLDEPTTGLHMNDVDTLIGLFDRLVDAGSTVIVIEHNLDVVSRADWVIDLGPGAGHEGG
EEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCC
QVVFEGLPAQLAAHPRSLTGQHMARRGKA
EEEEECCCHHHHCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8675016 [H]