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The map label for this gene is yngJ [H]

Identifier: 108762147

GI number: 108762147

Start: 3478916

End: 3480055

Strand: Direct

Name: yngJ [H]

Synonym: MXAN_2969

Alternate gene names: 108762147

Gene position: 3478916-3480055 (Clockwise)

Preceding gene: 108763802

Following gene: 108757449

Centisome position: 38.06

GC content: 65.61

Gene sequence:

>1140_bases
ATGCCCCACCCATTCACCGAGGAACACGAGGCCTTCCGCAACACGGTGCGCAGCTTCGTGGAGAAGGAGATGACCCCACA
CGGCCTCGAGTGGGACCGGGCGGGCATCTTCCCCAAGGAGCTGTTCCGCAAGGCGGGGGACCTGGGCTTCCTGGGCATCA
ACCACGACCCGAAGTACGGCGGTAGCGGGTTGGACTACTGGTACGTGACGGTGTTCGCGGAGGAGCTGAGCCGCAGCCTC
AACGCGGGCGTGAACATGGCGCTGCTGGTGCAGAGCCAGATGGCCACGCCCATCATCAACGAGATTGGAACGGACGAGCA
GAAGCGCGAGTTCCTGGAGCCGGCGCTCAAGGGCGAGAAGATCGCCGCGCTGGGCGTGAGCGAGCCGGGGTGCGGCTCGG
ACGTGGCCAGCATCAAGACGACGGCGCGCCGGGACGGGGATGACTACGTCATCAACGGCTCGAAGATGTGGATCACCAAC
GGCACGCGGGCGGACTTCATCACCCTGGCGGTGCGCACGGGCGAGGCCGGCTACGGCGGCATCTCCCTGGTGACGTTCCC
CACGGACGTGAAGGGCTTCGGCGTCTCCAAGAAGCTGGACAAGGTGGGCAACCTGTCCTCGGACACCGCCGTCCTCTACT
TCGAGGACTGCCGGATTCCGGCCCGCTACGTCCTGGGCGAGGAGAACGAAGGCTTCTACCACATCATGACCAACTTCCAG
GGTGAGCGCCTGGTGGGCGCCATCACCACGGTCGCGGGCATGGAGCGGATGGTGGAGGACTCCATCCGCTACGGCAACGA
GCGCGAGGCCTTCGGCCGGCCGCTGATGAAGTTCCAGGTGTGGCGCCACAAGTTCGTGGAGCACCTGACGGCCATCGAAG
CGGCCAAGCGCCTGACGTACCACGCGGTGGACCTCTTCGACCGGAAGGAGAACCCGGTGAAGGAGGTCTCCATGGCGAAG
CTGTTCGCGGGGGACCTGGCCCAGCGCGTGGCCTACGACTGCCAGCAGTTCTACGGCGGCATGGGCTACGTGGAGGAGAC
CTCCATCGCCCGCATGTGGCGCGACGTGCGCCTCATCACCATCGGCGGCGGCACCTCCGAGGTGATGAAGGAGATCATCT
CGAAGATCTACGGCTTCTAG

Upstream 100 bases:

>100_bases
CTGAAGGAGGGGAGCGGTGTGCCGGGGAGGCGGTGCTTGTGGCACCTAGAGGCCCCTGTTATTGATTCAAGAATCAATCC
TTTCGCGCCGAGGACACCCC

Downstream 100 bases:

>100_bases
CGCCGCGCACTCAGGCGCCGTGGCCCAGGCTCATCCCTTCCAGGGGCTTGGGCCCGCTGTCGAGCTCGGCGTGCATGACG
GTGTCGTCACGCACGCCCTC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPHPFTEEHEAFRNTVRSFVEKEMTPHGLEWDRAGIFPKELFRKAGDLGFLGINHDPKYGGSGLDYWYVTVFAEELSRSL
NAGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEKIAALGVSEPGCGSDVASIKTTARRDGDDYVINGSKMWITN
GTRADFITLAVRTGEAGYGGISLVTFPTDVKGFGVSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQ
GERLVGAITTVAGMERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTYHAVDLFDRKENPVKEVSMAK
LFAGDLAQRVAYDCQQFYGGMGYVEETSIARMWRDVRLITIGGGTSEVMKEIISKIYGF

Sequences:

>Translated_379_residues
MPHPFTEEHEAFRNTVRSFVEKEMTPHGLEWDRAGIFPKELFRKAGDLGFLGINHDPKYGGSGLDYWYVTVFAEELSRSL
NAGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEKIAALGVSEPGCGSDVASIKTTARRDGDDYVINGSKMWITN
GTRADFITLAVRTGEAGYGGISLVTFPTDVKGFGVSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQ
GERLVGAITTVAGMERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTYHAVDLFDRKENPVKEVSMAK
LFAGDLAQRVAYDCQQFYGGMGYVEETSIARMWRDVRLITIGGGTSEVMKEIISKIYGF
>Mature_378_residues
PHPFTEEHEAFRNTVRSFVEKEMTPHGLEWDRAGIFPKELFRKAGDLGFLGINHDPKYGGSGLDYWYVTVFAEELSRSLN
AGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEKIAALGVSEPGCGSDVASIKTTARRDGDDYVINGSKMWITNG
TRADFITLAVRTGEAGYGGISLVTFPTDVKGFGVSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQG
ERLVGAITTVAGMERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTYHAVDLFDRKENPVKEVSMAKL
FAGDLAQRVAYDCQQFYGGMGYVEETSIARMWRDVRLITIGGGTSEVMKEIISKIYGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=374, Percent_Identity=39.0374331550802, Blast_Score=266, Evalue=2e-71,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=35.7142857142857, Blast_Score=241, Evalue=6e-64,
Organism=Homo sapiens, GI4557233, Length=371, Percent_Identity=36.9272237196765, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=36.5497076023392, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI7656849, Length=372, Percent_Identity=32.7956989247312, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=31.9034852546917, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=32.8, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=32.8, Blast_Score=197, Evalue=9e-51,
Organism=Homo sapiens, GI21361497, Length=385, Percent_Identity=29.0909090909091, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI4557235, Length=339, Percent_Identity=28.023598820059, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI76496475, Length=339, Percent_Identity=28.023598820059, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI4503943, Length=375, Percent_Identity=25.0666666666667, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI7669494, Length=351, Percent_Identity=25.9259259259259, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI38505218, Length=327, Percent_Identity=25.0764525993884, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI48976061, Length=348, Percent_Identity=24.7126436781609, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI211971008, Length=348, Percent_Identity=24.7126436781609, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87081958, Length=372, Percent_Identity=28.494623655914, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1786223, Length=373, Percent_Identity=28.4182305630027, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI87082384, Length=287, Percent_Identity=25.4355400696864, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=374, Percent_Identity=37.4331550802139, Blast_Score=271, Evalue=3e-73,
Organism=Caenorhabditis elegans, GI17505929, Length=375, Percent_Identity=37.6, Blast_Score=265, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=32.620320855615, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17508101, Length=380, Percent_Identity=32.3684210526316, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17506239, Length=379, Percent_Identity=30.3430079155673, Blast_Score=191, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17534899, Length=379, Percent_Identity=31.6622691292876, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=30.8510638297872, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17570075, Length=379, Percent_Identity=31.1345646437995, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17533517, Length=360, Percent_Identity=31.9444444444444, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71990804, Length=276, Percent_Identity=35.1449275362319, Blast_Score=170, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=29.8181818181818, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI71985184, Length=386, Percent_Identity=28.2383419689119, Blast_Score=144, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=31.1688311688312, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71985192, Length=318, Percent_Identity=27.0440251572327, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17534353, Length=373, Percent_Identity=24.6648793565684, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17562446, Length=365, Percent_Identity=24.1095890410959, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=34.9462365591398, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI21355753, Length=374, Percent_Identity=35.2941176470588, Blast_Score=234, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24646207, Length=371, Percent_Identity=33.9622641509434, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=32.1052631578947, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=32.4538258575198, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI281363737, Length=339, Percent_Identity=29.2035398230088, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI19920834, Length=373, Percent_Identity=26.8096514745308, Blast_Score=127, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42386; Mature: 42255

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPFTEEHEAFRNTVRSFVEKEMTPHGLEWDRAGIFPKELFRKAGDLGFLGINHDPKYG
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCC
GSGLDYWYVTVFAEELSRSLNAGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEK
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHCCCHHHHHHHHHHHCCCE
IAALGVSEPGCGSDVASIKTTARRDGDDYVINGSKMWITNGTRADFITLAVRTGEAGYGG
EEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCEEEEECCCCCEEEEEEEEECCCCCCC
ISLVTFPTDVKGFGVSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQ
EEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHEECCCCCCEEEEEECCC
GERLVGAITTVAGMERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTY
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAVDLFDRKENPVKEVSMAKLFAGDLAQRVAYDCQQFYGGMGYVEETSIARMWRDVRLIT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEEE
IGGGTSEVMKEIISKIYGF
ECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PHPFTEEHEAFRNTVRSFVEKEMTPHGLEWDRAGIFPKELFRKAGDLGFLGINHDPKYG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCC
GSGLDYWYVTVFAEELSRSLNAGVNMALLVQSQMATPIINEIGTDEQKREFLEPALKGEK
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHCCCHHHHHHHHHHHCCCE
IAALGVSEPGCGSDVASIKTTARRDGDDYVINGSKMWITNGTRADFITLAVRTGEAGYGG
EEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCEEEEECCCCCEEEEEEEEECCCCCCC
ISLVTFPTDVKGFGVSKKLDKVGNLSSDTAVLYFEDCRIPARYVLGEENEGFYHIMTNFQ
EEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHEECCCCCCEEEEEECCC
GERLVGAITTVAGMERMVEDSIRYGNEREAFGRPLMKFQVWRHKFVEHLTAIEAAKRLTY
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAVDLFDRKENPVKEVSMAKLFAGDLAQRVAYDCQQFYGGMGYVEETSIARMWRDVRLIT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEEE
IGGGTSEVMKEIISKIYGF
ECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]