| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is adhA [H]
Identifier: 108762108
GI number: 108762108
Start: 520101
End: 521111
Strand: Direct
Name: adhA [H]
Synonym: MXAN_0456
Alternate gene names: 108762108
Gene position: 520101-521111 (Clockwise)
Preceding gene: 108762201
Following gene: 108761005
Centisome position: 5.69
GC content: 72.21
Gene sequence:
>1011_bases ATGGAAGGAAGCATGCGCGCGATGGTGCTGCGCGAGGTCGGGCAGCCCCTGCATGAGACGCGGCTGCCCATTCCTCGCCC CGGCCCGGAGGAGCTGTTGCTTCGCGTGCGCGCCTGCGCGGTCTGCCGCACCGACCTGCACGTCGTGGACGGTGAGCTGC CGAAGCCCAAGCTGCCGCTGGTCCCAGGCCATGAAATCGTGGCCACGGTGGAGGCGGCGGGCGAGCGGGCGACGGCCATT CCCGTGGGCACGCGAGTGGGCGTCCCCTGGCTCGGCTGGAGCTGCGGCCACTGCCGCTTCTGTCTGGCCGGCCAGGAGAA CCTCTGCGAGCAGGCACGCTTCACGGGGTACCAACTGGATGGTGGCTACGCGGAGTTCACGGTGGCCCACCAGCGCTTCT GCTTCCCCCTGCCGCCCGAGTACACCGACGTCCACGCCGCGCCGTTGATGTGCGCGGGCCTCATCGGCTTTCGCAGCCTC CGCATGGCGGGGAGGGAGCGTCGTCTGTTGGGTTTCTACGGCTTCGGCGCCGCGGCCCACCTGCTCATCCAGGTCGCGCG CCACCAAGGCCGGCGTGTCTTCGCCTTCACCCGGCCGGGGGACGTGGAGGGCCAACGGTTCGCGCGGGAGCTGGGCGCGG AGTGGGCCGGGGATTCGGACACCGTGCCTCCGGAGCGGCTGGACGCGGCCATCCTCTTCGCGCCGGTGGGCGCGCTGGTG CCCGCCGCGCTCCGGGCGGTGGACAAGGCCGGCGTGGTGGTGTGCGGCGGCATCCACATGAGCGACATCCCCGCGTTCCC CTATGCGCTGCTGTGGGAGGAGCGGGTGGTGCGCTCGGTGGCGAACCTCACCCGGGCGGATGCGCTGGACTTCCTCGCGC TCGCGCCCAAGGTGCCGGTGCGCACCCTGGTGCAAACCTTCCCACTGTCCGCCGCCAACGACGCCCTCACCGCGCTGAGG CGAGGCCAGGTGCACGGCGCGGCGGTGCTGGAGGTGGCGGCCCTGGGTTGA
Upstream 100 bases:
>100_bases ATGTGGCCGGGCCTGCTCGCGGGGGTGCAGATTTGAGGGGCCCCTCCCATCTTCCTCCCGGGTGCGCTGCTCTGGAGAGC GCGGCGCCAGGGGGTGAAGC
Downstream 100 bases:
>100_bases GCGCGGAGTCGGGCGGGCCTACATCCGCCTCTCAGGGTGGGCGGGGCAAATCGCCCCGCAGAGACTGCGCGGTGTCCCAT TTCGCCGCAAACGCAGCGTG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MEGSMRAMVLREVGQPLHETRLPIPRPGPEELLLRVRACAVCRTDLHVVDGELPKPKLPLVPGHEIVATVEAAGERATAI PVGTRVGVPWLGWSCGHCRFCLAGQENLCEQARFTGYQLDGGYAEFTVAHQRFCFPLPPEYTDVHAAPLMCAGLIGFRSL RMAGRERRLLGFYGFGAAAHLLIQVARHQGRRVFAFTRPGDVEGQRFARELGAEWAGDSDTVPPERLDAAILFAPVGALV PAALRAVDKAGVVVCGGIHMSDIPAFPYALLWEERVVRSVANLTRADALDFLALAPKVPVRTLVQTFPLSAANDALTALR RGQVHGAAVLEVAALG
Sequences:
>Translated_336_residues MEGSMRAMVLREVGQPLHETRLPIPRPGPEELLLRVRACAVCRTDLHVVDGELPKPKLPLVPGHEIVATVEAAGERATAI PVGTRVGVPWLGWSCGHCRFCLAGQENLCEQARFTGYQLDGGYAEFTVAHQRFCFPLPPEYTDVHAAPLMCAGLIGFRSL RMAGRERRLLGFYGFGAAAHLLIQVARHQGRRVFAFTRPGDVEGQRFARELGAEWAGDSDTVPPERLDAAILFAPVGALV PAALRAVDKAGVVVCGGIHMSDIPAFPYALLWEERVVRSVANLTRADALDFLALAPKVPVRTLVQTFPLSAANDALTALR RGQVHGAAVLEVAALG >Mature_336_residues MEGSMRAMVLREVGQPLHETRLPIPRPGPEELLLRVRACAVCRTDLHVVDGELPKPKLPLVPGHEIVATVEAAGERATAI PVGTRVGVPWLGWSCGHCRFCLAGQENLCEQARFTGYQLDGGYAEFTVAHQRFCFPLPPEYTDVHAAPLMCAGLIGFRSL RMAGRERRLLGFYGFGAAAHLLIQVARHQGRRVFAFTRPGDVEGQRFARELGAEWAGDSDTVPPERLDAAILFAPVGALV PAALRAVDKAGVVVCGGIHMSDIPAFPYALLWEERVVRSVANLTRADALDFLALAPKVPVRTLVQTFPLSAANDALTALR RGQVHGAAVLEVAALG
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI71565154, Length=110, Percent_Identity=35.4545454545455, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4501933, Length=104, Percent_Identity=35.5769230769231, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI34577061, Length=104, Percent_Identity=36.5384615384615, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4501929, Length=124, Percent_Identity=33.0645161290323, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI71743840, Length=123, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI262073058, Length=149, Percent_Identity=30.8724832214765, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI156627571, Length=326, Percent_Identity=26.6871165644172, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI87081918, Length=317, Percent_Identity=29.9684542586751, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87082401, Length=341, Percent_Identity=27.2727272727273, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786518, Length=230, Percent_Identity=34.3478260869565, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787863, Length=338, Percent_Identity=23.6686390532544, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790045, Length=214, Percent_Identity=29.4392523364486, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786552, Length=251, Percent_Identity=27.4900398406374, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI226510992, Length=124, Percent_Identity=29.8387096774194, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788073, Length=234, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562584, Length=307, Percent_Identity=25.7328990228013, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71988145, Length=340, Percent_Identity=25.2941176470588, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562582, Length=223, Percent_Identity=29.1479820627803, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17562876, Length=126, Percent_Identity=31.7460317460317, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562878, Length=124, Percent_Identity=31.4516129032258, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323961, Length=355, Percent_Identity=28.7323943661972, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324486, Length=360, Percent_Identity=27.7777777777778, Blast_Score=122, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6323729, Length=345, Percent_Identity=26.9565217391304, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6319621, Length=358, Percent_Identity=27.0949720670391, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323980, Length=149, Percent_Identity=34.8993288590604, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319949, Length=187, Percent_Identity=28.3422459893048, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320033, Length=247, Percent_Identity=24.6963562753036, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6319258, Length=166, Percent_Identity=33.7349397590361, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737895, Length=112, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR014187 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 36269; Mature: 36269
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGSMRAMVLREVGQPLHETRLPIPRPGPEELLLRVRACAVCRTDLHVVDGELPKPKLPL CCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC VPGHEIVATVEAAGERATAIPVGTRVGVPWLGWSCGHCRFCLAGQENLCEQARFTGYQLD CCCCHHEEEHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEEEC GGYAEFTVAHQRFCFPLPPEYTDVHAAPLMCAGLIGFRSLRMAGRERRLLGFYGFGAAAH CCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH LLIQVARHQGRRVFAFTRPGDVEGQRFARELGAEWAGDSDTVPPERLDAAILFAPVGALV HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHH PAALRAVDKAGVVVCGGIHMSDIPAFPYALLWEERVVRSVANLTRADALDFLALAPKVPV HHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RTLVQTFPLSAANDALTALRRGQVHGAAVLEVAALG HHHHHHCCCCCCHHHHHHHHHCCCCCHHHHEEEECC >Mature Secondary Structure MEGSMRAMVLREVGQPLHETRLPIPRPGPEELLLRVRACAVCRTDLHVVDGELPKPKLPL CCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC VPGHEIVATVEAAGERATAIPVGTRVGVPWLGWSCGHCRFCLAGQENLCEQARFTGYQLD CCCCHHEEEHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEEEC GGYAEFTVAHQRFCFPLPPEYTDVHAAPLMCAGLIGFRSLRMAGRERRLLGFYGFGAAAH CCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH LLIQVARHQGRRVFAFTRPGDVEGQRFARELGAEWAGDSDTVPPERLDAAILFAPVGALV HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHH PAALRAVDKAGVVVCGGIHMSDIPAFPYALLWEERVVRSVANLTRADALDFLALAPKVPV HHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RTLVQTFPLSAANDALTALRRGQVHGAAVLEVAALG HHHHHHCCCCCCHHHHHHHHHCCCCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]