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The map label for this gene is ydiU [C]

Identifier: 108762089

GI number: 108762089

Start: 979668

End: 981134

Strand: Reverse

Name: ydiU [C]

Synonym: MXAN_0863

Alternate gene names: 108762089

Gene position: 981134-979668 (Counterclockwise)

Preceding gene: 108758218

Following gene: 108758417

Centisome position: 10.73

GC content: 71.3

Gene sequence:

>1467_bases
ATGGCCACGCTCGAACAACTCCGCTTCGACAACACCTATGCCCGCCTGCCCGCCGGGTTCGGCGCGCGCGTCCACCCCAG
TCCCTTTCCAGACGCGAAGCTGGTGAGCGTCAACCCTGCCGCCTTGAAGCTCCTGGACCTGACGCCCGAGGAGGCGCAGC
GACCGGAGTTCGTTGCGGCGATGGGGGGCGCGAAGCCCCTGCCGGGGATGGAGCCCTTCGCCATGGTGTACGCGGGGCAC
CAGTTCGGCGTGTACGTGCCCCGGCTGGGCGACGGCCGCGCCCTGCTGCTGGGCGAGGTCCGCGACGCCGCCGGGGCGAA
GTGGGACCTGCACCTCAAGGGCGGCGGGCCCACGCCCTTCTCGCGCGGGGGTGACGGACGCGCGGTGCTGCGCTCCACCA
TCCGCGAATACCTGTGCGGCGAGGCCATGCACGGCCTGGGCATCCCCACCACGCGGGGCCTGGGCATCCTCGGCAGCCAG
GCCCCGGTGTACCGCGAGGCGGTGGAGACGGGCGCCATGCTGGTGCGCATGGCGCCCTCGCACGTGCGCTTCGGCACCTT
CGAGTTCTTCCACTACACCGAGCAGACCGAGCACGTGGCCACGCTGGCCGACCACGTCATCACCGAGCACTTCCCCCAAC
TCGCGGGCCAGGAAGGCCGCTACGCGCGCTTCTACACGGAGGTGGTGGAGCGCACGGCGCGGCTGATTGCGCAGTGGCAG
GCGGTGGGCTTCGCGCACGGGGTGATGAACACGGACAACATGTCCATCCTGGGCCTCACGCTGGACTACGGGCCCTTCGG
CTTCCTGGACGACTTCGAGCCGGGCTTCATCTGCAATCACTCCGACGACCGGGGCCGCTACGCATTCGACCAGCAGCCGC
GCATCGGACTGTGGAACCTCGCGTGTCTGGGCGAAGCGCTGCTCACCCTCATCTCGGAGGATGAGGCCCGCGCCGCGCTG
GCCACCTACCAGCCCGCCTACAACGCGCACTTCATGGACCGGATGCGCGCGAAGCTGGGCCTGCGGGAGACGCGCGACGA
GGACCGCGAGCTGGTGAGCGACCTGTTCGCCCGCATGGCCGAAGCCCACGTGGACTACACGCGCTTCTTCCGCGCGCTGG
GCCACTTCGCCTCGGCGGACGGCGCGGACACACGTCCCGTACGTGACATGTTCCCCGCCCCCGAGGGCTTCGATGCCTGG
GCCGGGCGCTACCGGGCGCGGCTGGCCGCCGAGGGCAGCGTGGACGCAGAGCGCCACGCGCGCATGACGCGGGTGAACCC
CAAGTACGTGCTGCGCAACTGGGTGGCGCAGGAGGCCATCTCCCGCGCGGAGGCCGGGGACTTCTCGCTCGTGGACCGGC
TGCTCGGCGTGCTGTCGGACCCGTTCGCCGAACACCCCGACGCGGAGCCCTACGCGGCGGCGCCTCCCACCTGGGGCCGG
CACCTGGCGGTGAGCTGCAGCTCCTGA

Upstream 100 bases:

>100_bases
GAGCGCGGCATGAAGGTCCCCCAGCTCAAGTAGTCCCACACAGCTTCCCGGAAGCGCGGTGGCTGGATGGCCGCCGCGCT
TCCATGTGTTCTCCTCCGTC

Downstream 100 bases:

>100_bases
GGCCGCGCCACGGGCGAAGGTTGAAGAAGCGAAGATTCCGCCCGGCCACGGTTGCCGGAACACACGGCAGGCGCAACCTT
TGCTGTCTATGGTGACGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MATLEQLRFDNTYARLPAGFGARVHPSPFPDAKLVSVNPAALKLLDLTPEEAQRPEFVAAMGGAKPLPGMEPFAMVYAGH
QFGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPFSRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGLGILGSQ
APVYREAVETGAMLVRMAPSHVRFGTFEFFHYTEQTEHVATLADHVITEHFPQLAGQEGRYARFYTEVVERTARLIAQWQ
AVGFAHGVMNTDNMSILGLTLDYGPFGFLDDFEPGFICNHSDDRGRYAFDQQPRIGLWNLACLGEALLTLISEDEARAAL
ATYQPAYNAHFMDRMRAKLGLRETRDEDRELVSDLFARMAEAHVDYTRFFRALGHFASADGADTRPVRDMFPAPEGFDAW
AGRYRARLAAEGSVDAERHARMTRVNPKYVLRNWVAQEAISRAEAGDFSLVDRLLGVLSDPFAEHPDAEPYAAAPPTWGR
HLAVSCSS

Sequences:

>Translated_488_residues
MATLEQLRFDNTYARLPAGFGARVHPSPFPDAKLVSVNPAALKLLDLTPEEAQRPEFVAAMGGAKPLPGMEPFAMVYAGH
QFGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPFSRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGLGILGSQ
APVYREAVETGAMLVRMAPSHVRFGTFEFFHYTEQTEHVATLADHVITEHFPQLAGQEGRYARFYTEVVERTARLIAQWQ
AVGFAHGVMNTDNMSILGLTLDYGPFGFLDDFEPGFICNHSDDRGRYAFDQQPRIGLWNLACLGEALLTLISEDEARAAL
ATYQPAYNAHFMDRMRAKLGLRETRDEDRELVSDLFARMAEAHVDYTRFFRALGHFASADGADTRPVRDMFPAPEGFDAW
AGRYRARLAAEGSVDAERHARMTRVNPKYVLRNWVAQEAISRAEAGDFSLVDRLLGVLSDPFAEHPDAEPYAAAPPTWGR
HLAVSCSS
>Mature_487_residues
ATLEQLRFDNTYARLPAGFGARVHPSPFPDAKLVSVNPAALKLLDLTPEEAQRPEFVAAMGGAKPLPGMEPFAMVYAGHQ
FGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPFSRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGLGILGSQA
PVYREAVETGAMLVRMAPSHVRFGTFEFFHYTEQTEHVATLADHVITEHFPQLAGQEGRYARFYTEVVERTARLIAQWQA
VGFAHGVMNTDNMSILGLTLDYGPFGFLDDFEPGFICNHSDDRGRYAFDQQPRIGLWNLACLGEALLTLISEDEARAALA
TYQPAYNAHFMDRMRAKLGLRETRDEDRELVSDLFARMAEAHVDYTRFFRALGHFASADGADTRPVRDMFPAPEGFDAWA
GRYRARLAAEGSVDAERHARMTRVNPKYVLRNWVAQEAISRAEAGDFSLVDRLLGVLSDPFAEHPDAEPYAAAPPTWGRH
LAVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=388, Percent_Identity=43.298969072165, Blast_Score=300, Evalue=3e-81,
Organism=Escherichia coli, GI1787999, Length=473, Percent_Identity=51.7970401691332, Blast_Score=471, Evalue=1e-134,
Organism=Saccharomyces cerevisiae, GI6325034, Length=286, Percent_Identity=38.8111888111888, Blast_Score=208, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y863_MYXXD (Q1DDZ9)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_629124.1
- STRING:   Q1DDZ9
- GeneID:   4105835
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_0863
- TIGR:   MXAN_0863
- eggNOG:   COG0397
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- PhylomeDB:   Q1DDZ9
- ProtClustDB:   CLSK755190
- BioCyc:   MXAN246197:MXAN_0863-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 53829; Mature: 53698

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEQLRFDNTYARLPAGFGARVHPSPFPDAKLVSVNPAALKLLDLTPEEAQRPEFVAA
CCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEECHHHEEEEECCHHHHCCCCEEHH
MGGAKPLPGMEPFAMVYAGHQFGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPF
CCCCCCCCCCCCHHHEEECCCCCEEECCCCCCCEEEEECHHHHCCCEEEEEEECCCCCCC
SRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGLGILGSQAPVYREAVETGAMLVRMAPS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCC
HVRFGTFEFFHYTEQTEHVATLADHVITEHFPQLAGQEGRYARFYTEVVERTARLIAQWQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
AVGFAHGVMNTDNMSILGLTLDYGPFGFLDDFEPGFICNHSDDRGRYAFDQQPRIGLWNL
HHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHH
ACLGEALLTLISEDEARAALATYQPAYNAHFMDRMRAKLGLRETRDEDRELVSDLFARMA
HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHH
EAHVDYTRFFRALGHFASADGADTRPVRDMFPAPEGFDAWAGRYRARLAAEGSVDAERHA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
RMTRVNPKYVLRNWVAQEAISRAEAGDFSLVDRLLGVLSDPFAEHPDAEPYAAAPPTWGR
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
HLAVSCSS
EEEEEECC
>Mature Secondary Structure 
ATLEQLRFDNTYARLPAGFGARVHPSPFPDAKLVSVNPAALKLLDLTPEEAQRPEFVAA
CCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEECHHHEEEEECCHHHHCCCCEEHH
MGGAKPLPGMEPFAMVYAGHQFGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPF
CCCCCCCCCCCCHHHEEECCCCCEEECCCCCCCEEEEECHHHHCCCEEEEEEECCCCCCC
SRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGLGILGSQAPVYREAVETGAMLVRMAPS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCC
HVRFGTFEFFHYTEQTEHVATLADHVITEHFPQLAGQEGRYARFYTEVVERTARLIAQWQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
AVGFAHGVMNTDNMSILGLTLDYGPFGFLDDFEPGFICNHSDDRGRYAFDQQPRIGLWNL
HHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHH
ACLGEALLTLISEDEARAALATYQPAYNAHFMDRMRAKLGLRETRDEDRELVSDLFARMA
HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHH
EAHVDYTRFFRALGHFASADGADTRPVRDMFPAPEGFDAWAGRYRARLAAEGSVDAERHA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
RMTRVNPKYVLRNWVAQEAISRAEAGDFSLVDRLLGVLSDPFAEHPDAEPYAAAPPTWGR
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
HLAVSCSS
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA