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The map label for this gene is yafE [C]

Identifier: 108762010

GI number: 108762010

Start: 468955

End: 469761

Strand: Direct

Name: yafE [C]

Synonym: MXAN_0408

Alternate gene names: 108762010

Gene position: 468955-469761 (Clockwise)

Preceding gene: 108759423

Following gene: 108763241

Centisome position: 5.13

GC content: 71.13

Gene sequence:

>807_bases
GTGTGCCCGCGAGGAGAGGAGCCTGTCATGCAGGTGGACTTCGGACGCACGTCGTCGGACTACGTGAGGCACCGGGCGGG
CTTTCCGGAGGCCTTCTTCGAACGGCTCGACAGGGAGGGCCTCCTTCGTTCGGGCCTCCGCGCCGTCGACCTGGGGACGG
GCACGGGCACGGTGGCCCGAGGGTTGGCCCAGCGCGGCGCCGTGGTGACGGGGCTGGATGTGTCCGCGGACATGCTGGAT
GCCGCCCGTGGGCTCGCCTCTGGAATGGGGCTGGGCATCGACTTCCGACAGGCACCCGCGGAGAACACGGGCCTGCCGTC
ACAGGCGTTCGAGCTGGTGGTCGCGGGGCAGTGCTGGCACTGGTTCGACCGGCCCGCCGCAGCGCGTGAGGCCGCGCGGT
TGCTCGTTCCCGGGGGCCGTCTGGTCATCGCCCACTTCGACTGGCTGCCCCTGCCCGGCAACGTGGTGGAGGCCACCGAG
CGGCTCATCGAGCGCTTCAACCCGGGCGCTCCCGCGCCCTTCGTATCCTTGAGCCAGTCTTCCGGTGTCTATCCTCCGTG
GTTCCGAGACGCCGCCGAGGCAGGCTTCACCCAGCTCACCTCGTTCTCCTTCGACGTGTCCGTGTCGTACAGCCCCCGCG
CGTGGCGGGGGCGCATCCGCGCCAGCGCGAAGGTGGGCGCGTCCATGCCTGCGAGCGCGGTGAGTGGCTTCGATGCCGCG
CTCGCGGACCTGCTCGCCGGGAGCTTTCCGGCGGACTCGCTCGACATTCCCCACCGCGTCTTCGCGCTGCTCGCGACGCG
ACCCTGA

Upstream 100 bases:

>100_bases
TCCGCCCTTGGGCCTACTCATGTCTCGCGCACCTCCGCGAAGGCCATTGTCGACTCGACTGGATGACGTGTCGATACGTC
CCCAGGTCGGCGGGGCCCGC

Downstream 100 bases:

>100_bases
ACAGGAGCACCTGTCCATGTCCTCGCATCCTCACGTCGTCCACGAGCCCGAGCTTCCCTGGACCGAAGTCACGCAAGGTC
CCCGGGTGGAGTACCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Methyltransferase Domain Family

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MCPRGEEPVMQVDFGRTSSDYVRHRAGFPEAFFERLDREGLLRSGLRAVDLGTGTGTVARGLAQRGAVVTGLDVSADMLD
AARGLASGMGLGIDFRQAPAENTGLPSQAFELVVAGQCWHWFDRPAAAREAARLLVPGGRLVIAHFDWLPLPGNVVEATE
RLIERFNPGAPAPFVSLSQSSGVYPPWFRDAAEAGFTQLTSFSFDVSVSYSPRAWRGRIRASAKVGASMPASAVSGFDAA
LADLLAGSFPADSLDIPHRVFALLATRP

Sequences:

>Translated_268_residues
MCPRGEEPVMQVDFGRTSSDYVRHRAGFPEAFFERLDREGLLRSGLRAVDLGTGTGTVARGLAQRGAVVTGLDVSADMLD
AARGLASGMGLGIDFRQAPAENTGLPSQAFELVVAGQCWHWFDRPAAAREAARLLVPGGRLVIAHFDWLPLPGNVVEATE
RLIERFNPGAPAPFVSLSQSSGVYPPWFRDAAEAGFTQLTSFSFDVSVSYSPRAWRGRIRASAKVGASMPASAVSGFDAA
LADLLAGSFPADSLDIPHRVFALLATRP
>Mature_268_residues
MCPRGEEPVMQVDFGRTSSDYVRHRAGFPEAFFERLDREGLLRSGLRAVDLGTGTGTVARGLAQRGAVVTGLDVSADMLD
AARGLASGMGLGIDFRQAPAENTGLPSQAFELVVAGQCWHWFDRPAAAREAARLLVPGGRLVIAHFDWLPLPGNVVEATE
RLIERFNPGAPAPFVSLSQSSGVYPPWFRDAAEAGFTQLTSFSFDVSVSYSPRAWRGRIRASAKVGASMPASAVSGFDAA
LADLLAGSFPADSLDIPHRVFALLATRP

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28602; Mature: 28602

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPRGEEPVMQVDFGRTSSDYVRHRAGFPEAFFERLDREGLLRSGLRAVDLGTGTGTVAR
CCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCHHHHHHCCCEEEECCCCCHHHHH
GLAQRGAVVTGLDVSADMLDAARGLASGMGLGIDFRQAPAENTGLPSQAFELVVAGQCWH
HHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEECCCCHHH
WFDRPAAAREAARLLVPGGRLVIAHFDWLPLPGNVVEATERLIERFNPGAPAPFVSLSQS
HHCCCHHHHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC
SGVYPPWFRDAAEAGFTQLTSFSFDVSVSYSPRAWRGRIRASAKVGASMPASAVSGFDAA
CCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LADLLAGSFPADSLDIPHRVFALLATRP
HHHHHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MCPRGEEPVMQVDFGRTSSDYVRHRAGFPEAFFERLDREGLLRSGLRAVDLGTGTGTVAR
CCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCHHHHHHCCCEEEECCCCCHHHHH
GLAQRGAVVTGLDVSADMLDAARGLASGMGLGIDFRQAPAENTGLPSQAFELVVAGQCWH
HHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEECCCCHHH
WFDRPAAAREAARLLVPGGRLVIAHFDWLPLPGNVVEATERLIERFNPGAPAPFVSLSQS
HHCCCHHHHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC
SGVYPPWFRDAAEAGFTQLTSFSFDVSVSYSPRAWRGRIRASAKVGASMPASAVSGFDAA
CCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LADLLAGSFPADSLDIPHRVFALLATRP
HHHHHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA