| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761949
Identifier: 108761949
GI number: 108761949
Start: 1541354
End: 1542013
Strand: Direct
Name: 108761949
Synonym: MXAN_1317
Alternate gene names: NA
Gene position: 1541354-1542013 (Clockwise)
Preceding gene: 108757170
Following gene: 108764019
Centisome position: 16.86
GC content: 67.42
Gene sequence:
>660_bases ATGTCCCGCTTCTCTTCCCATTCCTCCTTCCTGGGCCGCGCCGCCGCCGCCCTGCTGCTGGCCGGTTCCCTGTCCGCGTG CGGCGATGACCTCGAGCTGCCATCAGAGAACCCTCCGACGGATGGCTCCCACGTGAATCACGTGGCCAACGATGACGGCT CGTACACCACCACCGTGAACGCGACGAGCAGCGCGGACTGGATTGGCCTGGACCTGGACAAGGGCGCGCAGGTGAGTGCT TCTGATGACACTGTCTGGGACCTGGCCTTCAACCGCTTCAACGTCCGCACCCGGGGCGGCGTGAGTGGTACCGGCAACGT GGCGGTGGCGGTGCTCCTCGAGACGGACTTCGCGGCGGTGACGCGGGCTCCTGCGGACGGCTACGTCGCGGATTCCGAGG ACGGCCCGGATCGGGGCGAGGACCCGGACAGCGCCTTCCAGCAGGGCGACGGGTGGTACGTCTATGACATGACGACGCAC GCCCTCACGGCGCGTCGCAATGTGTACGTCGTCCGCTCCGACGCTGGTGACTACTTCAAGGTCGCCATGCAGTCCTATTA CGACGATGCGGGCACGCCGGGGATGTTGTCGTTCCGCTGGGCGAAGGTGCCTGGCCCCGCCTCCAGCGGCAGCGCGGTGA CGCAGCCGTCCTCGTACTGA
Upstream 100 bases:
>100_bases GGGCAACCCCACCGACCTTCCGATTCCCCCTCGCGCCATCCAGGCCGGCATCTCCGCCCGGCTCTGACGCTCCCTTCCAC CTCTCACTCAAGGAGTCCCG
Downstream 100 bases:
>100_bases GCCTCCTTCCACTTCCAGGTGTCCAACATGAATCAGACCGCGAACTCTGATGTCGTTTCCGAGTCCTCCCGTCTGCGCCA GCGCTGGCAGACCCTCCGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSRFSSHSSFLGRAAAALLLAGSLSACGDDLELPSENPPTDGSHVNHVANDDGSYTTTVNATSSADWIGLDLDKGAQVSA SDDTVWDLAFNRFNVRTRGGVSGTGNVAVAVLLETDFAAVTRAPADGYVADSEDGPDRGEDPDSAFQQGDGWYVYDMTTH ALTARRNVYVVRSDAGDYFKVAMQSYYDDAGTPGMLSFRWAKVPGPASSGSAVTQPSSY
Sequences:
>Translated_219_residues MSRFSSHSSFLGRAAAALLLAGSLSACGDDLELPSENPPTDGSHVNHVANDDGSYTTTVNATSSADWIGLDLDKGAQVSA SDDTVWDLAFNRFNVRTRGGVSGTGNVAVAVLLETDFAAVTRAPADGYVADSEDGPDRGEDPDSAFQQGDGWYVYDMTTH ALTARRNVYVVRSDAGDYFKVAMQSYYDDAGTPGMLSFRWAKVPGPASSGSAVTQPSSY >Mature_218_residues SRFSSHSSFLGRAAAALLLAGSLSACGDDLELPSENPPTDGSHVNHVANDDGSYTTTVNATSSADWIGLDLDKGAQVSAS DDTVWDLAFNRFNVRTRGGVSGTGNVAVAVLLETDFAAVTRAPADGYVADSEDGPDRGEDPDSAFQQGDGWYVYDMTTHA LTARRNVYVVRSDAGDYFKVAMQSYYDDAGTPGMLSFRWAKVPGPASSGSAVTQPSSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23083; Mature: 22952
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFSSHSSFLGRAAAALLLAGSLSACGDDLELPSENPPTDGSHVNHVANDDGSYTTTVN CCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEE ATSSADWIGLDLDKGAQVSASDDTVWDLAFNRFNVRTRGGVSGTGNVAVAVLLETDFAAV CCCCCCEEEEECCCCCEEECCCCEEEEEEECEEEEEECCCCCCCCCEEEEEEEECCCHHH TRAPADGYVADSEDGPDRGEDPDSAFQQGDGWYVYDMTTHALTARRNVYVVRSDAGDYFK CCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEECHHHEEECCEEEEEECCCCCHHH VAMQSYYDDAGTPGMLSFRWAKVPGPASSGSAVTQPSSY HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SRFSSHSSFLGRAAAALLLAGSLSACGDDLELPSENPPTDGSHVNHVANDDGSYTTTVN CCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEE ATSSADWIGLDLDKGAQVSASDDTVWDLAFNRFNVRTRGGVSGTGNVAVAVLLETDFAAV CCCCCCEEEEECCCCCEEECCCCEEEEEEECEEEEEECCCCCCCCCEEEEEEEECCCHHH TRAPADGYVADSEDGPDRGEDPDSAFQQGDGWYVYDMTTHALTARRNVYVVRSDAGDYFK CCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEECHHHEEECCEEEEEECCCCCHHH VAMQSYYDDAGTPGMLSFRWAKVPGPASSGSAVTQPSSY HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA