| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cysJ [H]
Identifier: 108761948
GI number: 108761948
Start: 2714128
End: 2715954
Strand: Reverse
Name: cysJ [H]
Synonym: MXAN_2335
Alternate gene names: 108761948
Gene position: 2715954-2714128 (Counterclockwise)
Preceding gene: 108760381
Following gene: 108763120
Centisome position: 29.72
GC content: 69.51
Gene sequence:
>1827_bases ATGAGCGCATCCCCTGCCACCCATGCTCCCCCGTTCATCAACGCTCTGCTGGGTGAGAACAAGAGTGCCCTGCTGCTCAA GCTCGTGGAGGAGATGGACGCCTCCGCCCTGCACTGGCTGAGCGGCTACACGGCGGGACTGGCCGTCCGCGCCCCCCAGA CCACCGTTGTCCCCGTGACGCCCGTACCCGTGGCCGCCCCCGCCGGTCACTTCACCATCATCTACGGGACGCAGACGGGT AACAGCCGCCTCCTGGCCGAGCGCCTCAAGCACCAGGTGGAGTCCGCCGGGCTCGCCACGCGGCTGTTCCGGGCCAGCGA CTATCCGGTGCGGGAGCTGGCCAAGGAGAAGCTGCTCTGCGTGGTCATCAGCACCCAGGGAGATGGCGACCCGCCGGACG ACGCACGCGGTTTCAGTGAGTTCATCCTCGGCAAGCGCGCGCCTCGCATGGAGGGGCTGCGCTACGCCGTGCTGGGGCTG GGAGACTCCAGCTACCCGCGCTTCTGCGAGGTGGGCCGGCGGCTCGACGCCCGCTTCGCGGAGTTGGGCGCCAGCCGGCT GTTGGAGCGTGCCGATTGCGATGTGGACTTCGAGCCCGTGGCCAAGGGTTGGCTCGACCAGGCCTACACCCTGGCGCGCG AAGCACTGACTCCGCAGGCGACGGTGACGGCCACGGTCGTGCCGCTGCGGGAGCCGCACGCCACGCCCGCGTTCACCAAG GAAGCGCCCTACACGGCGGAGGTGCTGCTCAATCAGCGCATCACTGCACGCGGCGCGCTCAAGGACGTGCGGCACCTGGA GCTGTCGCTCGCGGGCTCCGGGCTGGAATACGCCCCCGGCGACGCGCTGGGCGTGTGGCCCCACAATCCGCCGGAGCTGG TGGCGTCCTTCCTGTCCGAGCTGCGCCTCGACGGAGAAGCGGCGGTCACCCGAGAGGGCCGCACGCTCCCGCTGGCGCGC TGGCTGAGTGACGAGTTGGAAATCACCAGGCTCAACCGCCCCTTCCTGGAGCGACAAGCCACGCTGTCCGGCAGCGCGGC GCTGCACGAAGTGCTCGAACCGGGCCGCACCGAGGCCTTCCGCGCACTGCTGGCGGGGCATCAGGTCATCGACGTACTCC GCGCCCACAAGGCCACCTGGGACGCCACGGAGCTGGTCCAGTCCCTGCGCCGGCTGACGCCCCGGTTGTACTCGATTGCC TCCAGCCCCAAGCGCGTGGGTGAAGAGGCGCACCTCACGGTGGCGGTGGTGGACTACACGGTGTTCGACCTGCGGCACTT CGGCGCGGCGTCGTACCACCTGGCCACGCGCACGGCCGGCACCGACACGGTCCGCATCTTCATCGAGCCGAACGAACGCT TCCGGCTGCCGCAGGACGGCGACAAGGACGTGCTGATGATTGGCCCTGGCACCGGCGTGGCGCCCTTCCGGGCCTTCGTC CAGGAGCGCGCGGAGACCGGAGCGAAGGGCCGCAACTGGCTCTTCTTCGGTGAGCAACACTTCCGCACCCAGTTCCTCTA CCAGACGGAGTGGCAGGAGGCCCTGAAGAAGCAGACGCTGCACCGGCTGTCACTCGCCTTCTCGCGGGACCGCGCTCAGA AGGTCTACGTGCAGCACCGGCTGCGTGAGTCCGGACGTGACGTCTACGAATGGCTCGAAGGAGGCGCCCACCTCTACGTG TGCGGCGACGCCCAGCGCATGGCCCCGGATGTCCACGAGGCACTGGTGGACGTCGTCTCCACCCACGGCGGCAAGAGCCG CGAGGACGCGCACGCCTGGCTCGAATCCCTGCGCGAGCAGCGGCGCTACCTGCGCGACGTCTACTGA
Upstream 100 bases:
>100_bases CGGAGGCCCGCGATGCCGGCGCCGCGTGGCTGGAGCTGGAAGCCACTGAAGACCTGCAGCAACACCTCGACCGGATCATC TCCCTCCGGGAGGCCGCACG
Downstream 100 bases:
>100_bases CCCATTCCGATTGCGAGCAACGACATGAGCCACCAGCCCAAGCCTCTCTCCGAAGTGGAGCACATCAAGACCCAGAGCCG CCTGCTCCGGGGAAGTCTGG
Product: sulfite reductase [NADPH] flavoprotein, alpha-component
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MSASPATHAPPFINALLGENKSALLLKLVEEMDASALHWLSGYTAGLAVRAPQTTVVPVTPVPVAAPAGHFTIIYGTQTG NSRLLAERLKHQVESAGLATRLFRASDYPVRELAKEKLLCVVISTQGDGDPPDDARGFSEFILGKRAPRMEGLRYAVLGL GDSSYPRFCEVGRRLDARFAELGASRLLERADCDVDFEPVAKGWLDQAYTLAREALTPQATVTATVVPLREPHATPAFTK EAPYTAEVLLNQRITARGALKDVRHLELSLAGSGLEYAPGDALGVWPHNPPELVASFLSELRLDGEAAVTREGRTLPLAR WLSDELEITRLNRPFLERQATLSGSAALHEVLEPGRTEAFRALLAGHQVIDVLRAHKATWDATELVQSLRRLTPRLYSIA SSPKRVGEEAHLTVAVVDYTVFDLRHFGAASYHLATRTAGTDTVRIFIEPNERFRLPQDGDKDVLMIGPGTGVAPFRAFV QERAETGAKGRNWLFFGEQHFRTQFLYQTEWQEALKKQTLHRLSLAFSRDRAQKVYVQHRLRESGRDVYEWLEGGAHLYV CGDAQRMAPDVHEALVDVVSTHGGKSREDAHAWLESLREQRRYLRDVY
Sequences:
>Translated_608_residues MSASPATHAPPFINALLGENKSALLLKLVEEMDASALHWLSGYTAGLAVRAPQTTVVPVTPVPVAAPAGHFTIIYGTQTG NSRLLAERLKHQVESAGLATRLFRASDYPVRELAKEKLLCVVISTQGDGDPPDDARGFSEFILGKRAPRMEGLRYAVLGL GDSSYPRFCEVGRRLDARFAELGASRLLERADCDVDFEPVAKGWLDQAYTLAREALTPQATVTATVVPLREPHATPAFTK EAPYTAEVLLNQRITARGALKDVRHLELSLAGSGLEYAPGDALGVWPHNPPELVASFLSELRLDGEAAVTREGRTLPLAR WLSDELEITRLNRPFLERQATLSGSAALHEVLEPGRTEAFRALLAGHQVIDVLRAHKATWDATELVQSLRRLTPRLYSIA SSPKRVGEEAHLTVAVVDYTVFDLRHFGAASYHLATRTAGTDTVRIFIEPNERFRLPQDGDKDVLMIGPGTGVAPFRAFV QERAETGAKGRNWLFFGEQHFRTQFLYQTEWQEALKKQTLHRLSLAFSRDRAQKVYVQHRLRESGRDVYEWLEGGAHLYV CGDAQRMAPDVHEALVDVVSTHGGKSREDAHAWLESLREQRRYLRDVY >Mature_607_residues SASPATHAPPFINALLGENKSALLLKLVEEMDASALHWLSGYTAGLAVRAPQTTVVPVTPVPVAAPAGHFTIIYGTQTGN SRLLAERLKHQVESAGLATRLFRASDYPVRELAKEKLLCVVISTQGDGDPPDDARGFSEFILGKRAPRMEGLRYAVLGLG DSSYPRFCEVGRRLDARFAELGASRLLERADCDVDFEPVAKGWLDQAYTLAREALTPQATVTATVVPLREPHATPAFTKE APYTAEVLLNQRITARGALKDVRHLELSLAGSGLEYAPGDALGVWPHNPPELVASFLSELRLDGEAAVTREGRTLPLARW LSDELEITRLNRPFLERQATLSGSAALHEVLEPGRTEAFRALLAGHQVIDVLRAHKATWDATELVQSLRRLTPRLYSIAS SPKRVGEEAHLTVAVVDYTVFDLRHFGAASYHLATRTAGTDTVRIFIEPNERFRLPQDGDKDVLMIGPGTGVAPFRAFVQ ERAETGAKGRNWLFFGEQHFRTQFLYQTEWQEALKKQTLHRLSLAFSRDRAQKVYVQHRLRESGRDVYEWLEGGAHLYVC GDAQRMAPDVHEALVDVVSTHGGKSREDAHAWLESLREQRRYLRDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI7657393, Length=603, Percent_Identity=33.4991708126036, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI221316709, Length=603, Percent_Identity=33.4991708126036, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI221316705, Length=612, Percent_Identity=33.0065359477124, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI127139033, Length=613, Percent_Identity=29.3637846655791, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI221316707, Length=531, Percent_Identity=33.5216572504708, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI24041029, Length=597, Percent_Identity=30.4857621440536, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI10835173, Length=651, Percent_Identity=28.2642089093702, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI40254422, Length=650, Percent_Identity=29.5384615384615, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI169790956, Length=438, Percent_Identity=29.2237442922374, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI169790958, Length=438, Percent_Identity=29.2237442922374, Blast_Score=135, Evalue=1e-31, Organism=Escherichia coli, GI1789123, Length=606, Percent_Identity=43.8943894389439, Blast_Score=479, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17554134, Length=610, Percent_Identity=28.6885245901639, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17566446, Length=579, Percent_Identity=27.1157167530225, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17531441, Length=148, Percent_Identity=35.8108108108108, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32563863, Length=127, Percent_Identity=37.007874015748, Blast_Score=85, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6321832, Length=639, Percent_Identity=28.3255086071987, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6325305, Length=634, Percent_Identity=23.9747634069401, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321143, Length=390, Percent_Identity=27.9487179487179, Blast_Score=130, Evalue=6e-31, Organism=Drosophila melanogaster, GI17137192, Length=602, Percent_Identity=29.9003322259136, Blast_Score=226, Evalue=5e-59, Organism=Drosophila melanogaster, GI24582192, Length=515, Percent_Identity=29.7087378640777, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24660907, Length=596, Percent_Identity=27.3489932885906, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24660903, Length=596, Percent_Identity=27.3489932885906, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI78706872, Length=522, Percent_Identity=30.0766283524904, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24583543, Length=522, Percent_Identity=30.0766283524904, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI78706876, Length=522, Percent_Identity=30.0766283524904, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI24647438, Length=424, Percent_Identity=27.8301886792453, Blast_Score=97, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 67496; Mature: 67365
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPATHAPPFINALLGENKSALLLKLVEEMDASALHWLSGYTAGLAVRAPQTTVVPVT CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCCCEEEECCCCEEEECC PVPVAAPAGHFTIIYGTQTGNSRLLAERLKHQVESAGLATRLFRASDYPVRELAKEKLLC CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEE VVISTQGDGDPPDDARGFSEFILGKRAPRMEGLRYAVLGLGDSSYPRFCEVGRRLDARFA EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH ELGASRLLERADCDVDFEPVAKGWLDQAYTLAREALTPQATVTATVVPLREPHATPAFTK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCC EAPYTAEVLLNQRITARGALKDVRHLELSLAGSGLEYAPGDALGVWPHNPPELVASFLSE CCCCHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHH LRLDGEAAVTREGRTLPLARWLSDELEITRLNRPFLERQATLSGSAALHEVLEPGRTEAF HCCCCCCEEECCCCCCHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHCCCHHHHH RALLAGHQVIDVLRAHKATWDATELVQSLRRLTPRLYSIASSPKRVGEEAHLTVAVVDYT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEHHH VFDLRHFGAASYHLATRTAGTDTVRIFIEPNERFRLPQDGDKDVLMIGPGTGVAPFRAFV HHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHH QERAETGAKGRNWLFFGEQHFRTQFLYQTEWQEALKKQTLHRLSLAFSRDRAQKVYVQHR HHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRESGRDVYEWLEGGAHLYVCGDAQRMAPDVHEALVDVVSTHGGKSREDAHAWLESLREQ HHHCCHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RRYLRDVY HHHHHHCC >Mature Secondary Structure SASPATHAPPFINALLGENKSALLLKLVEEMDASALHWLSGYTAGLAVRAPQTTVVPVT CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCCCEEEECCCCEEEECC PVPVAAPAGHFTIIYGTQTGNSRLLAERLKHQVESAGLATRLFRASDYPVRELAKEKLLC CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEE VVISTQGDGDPPDDARGFSEFILGKRAPRMEGLRYAVLGLGDSSYPRFCEVGRRLDARFA EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH ELGASRLLERADCDVDFEPVAKGWLDQAYTLAREALTPQATVTATVVPLREPHATPAFTK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCC EAPYTAEVLLNQRITARGALKDVRHLELSLAGSGLEYAPGDALGVWPHNPPELVASFLSE CCCCHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHH LRLDGEAAVTREGRTLPLARWLSDELEITRLNRPFLERQATLSGSAALHEVLEPGRTEAF HCCCCCCEEECCCCCCHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHCCCHHHHH RALLAGHQVIDVLRAHKATWDATELVQSLRRLTPRLYSIASSPKRVGEEAHLTVAVVDYT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEHHH VFDLRHFGAASYHLATRTAGTDTVRIFIEPNERFRLPQDGDKDVLMIGPGTGVAPFRAFV HHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHH QERAETGAKGRNWLFFGEQHFRTQFLYQTEWQEALKKQTLHRLSLAFSRDRAQKVYVQHR HHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRESGRDVYEWLEGGAHLYVCGDAQRMAPDVHEALVDVVSTHGGKSREDAHAWLESLREQ HHHCCHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RRYLRDVY HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA