| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761917
Identifier: 108761917
GI number: 108761917
Start: 317893
End: 319128
Strand: Direct
Name: 108761917
Synonym: MXAN_0266
Alternate gene names: NA
Gene position: 317893-319128 (Clockwise)
Preceding gene: 108758234
Following gene: 108761819
Centisome position: 3.48
GC content: 72.82
Gene sequence:
>1236_bases TTGCCGGCGGGCGGGGGCGGCCGGCCCCTCGCTGAGAAAGAGGCGTCGCCGATGGTGTCCGAGCTCCCCCTTCGCTCGCG GTGGGGCGCCGTGTGTCTGAGTGGAGTGCTGCTGTTCTCGACGCCGGGCCTGGCCCGCGGTGGGGACGGGAGCCCGGAGG TCCCGGTGGATGCGCCCCTCCAGGCGCACGTGGGGCCTTCCCAGCAGTCGTTGGCGCAGGTGCCTCCGCCGCCCTCGGAG CGCCCCGATTTCAAGCCGCTCGCGGTGGCGGTGGCGGTGGTGCCGGGGTTGCTCTTCCATGGGCTGGGGCCCCTGGTGGC GGGGGACCGTCACACGGCGAAGCGGCTCTTCGCGTTGGAGGGCGCGGGCCTGGGGCTCATCGCGCTGGGCGGCGTGCCCA TTGCCCTCACGGGCGCCTCGCGGCGCACCATTGCTCCGCTGTACGCGGTGACGCTGGCGGGCTTCAGCGTGCTGGGCATC TCCGCGCTGGCCAACCTGTATGCGGTGACGGCGCCGGCGTTCGACGCGGGCGTCGCGCCGCCCCTGCTTCCTCCGCTGGA GTTGGAGGTGGGCTATCAGTATGTGAATGACGCTGCGTTCGACTACCGCCACTTCCTCACGGTGGGGGCGCAGGCCCGCT TCGACTCGCTGCGCCTGCTGGGCACGGTGCGGGTGGACCCTTCCGAGGGCAACACCCAGGTGCGCCTGGGCGGGGCGTGG CGGCTGTTGGGCGCGCCGGAGCGCGCGCTGTCGGGCACGGATGGCAGCGCGCTGGACGTGGAGGCTTTTGGCCAGTTCCA CCGCTACCCCACCGAGGGCTTCGCGCTCATCAGCGGAGAGGTGGCGCTGCGGGGCCGGCTGGCCATGTCGCGCATCAGCC CGGCCATGGCGGGCTCCTTCGCGGAGGTCAGCGTGGGCACGTCGGCGGAGGCCTATACGTACCCGGGCGCGGTGAGCGAC GGGAACCTGCACGAGCAACTGCTCTTCACCTTCGGCTACGGCGTGTGGCTGGGCCGGGGTGGGCCGTTCCGGGGCGAGGC GATGCTCTATTACGACCACCGCAAGGACTCGTTCGCGGGGGGCATCCGCTCGCGCGGCGGCGGAATCGTGGGCGCCTTTG GCCTGAGGGGCCGGGCGCTGCTGACGGATGACTGGGGTGTCGCCGCCGAGGTGCAGGGAGGCGGCGCGCTCGTGGGCCGG CTGTCGTTGATTCGTGCCCTGGGAGGTGAGCGGTGA
Upstream 100 bases:
>100_bases AGTTTTTCAGGGTTACCAAGGTCTGAGCCTTCACATTTCTTCACGCGGGGCACCTGCCGTGGGCCGCCCCGGCGCGGTTA TCTAGCGGACCTGCCTGCGC
Downstream 100 bases:
>100_bases TGCGCGTGGGAGTGATGGCGGCACTGGTGGTTGCGGGGTGCGGCATGCGGCCCGCGGAGAACCGCGCGATTGCGGATTCC AAGGTGGGCCAGGCGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPAGGGGRPLAEKEASPMVSELPLRSRWGAVCLSGVLLFSTPGLARGGDGSPEVPVDAPLQAHVGPSQQSLAQVPPPPSE RPDFKPLAVAVAVVPGLLFHGLGPLVAGDRHTAKRLFALEGAGLGLIALGGVPIALTGASRRTIAPLYAVTLAGFSVLGI SALANLYAVTAPAFDAGVAPPLLPPLELEVGYQYVNDAAFDYRHFLTVGAQARFDSLRLLGTVRVDPSEGNTQVRLGGAW RLLGAPERALSGTDGSALDVEAFGQFHRYPTEGFALISGEVALRGRLAMSRISPAMAGSFAEVSVGTSAEAYTYPGAVSD GNLHEQLLFTFGYGVWLGRGGPFRGEAMLYYDHRKDSFAGGIRSRGGGIVGAFGLRGRALLTDDWGVAAEVQGGGALVGR LSLIRALGGER
Sequences:
>Translated_411_residues MPAGGGGRPLAEKEASPMVSELPLRSRWGAVCLSGVLLFSTPGLARGGDGSPEVPVDAPLQAHVGPSQQSLAQVPPPPSE RPDFKPLAVAVAVVPGLLFHGLGPLVAGDRHTAKRLFALEGAGLGLIALGGVPIALTGASRRTIAPLYAVTLAGFSVLGI SALANLYAVTAPAFDAGVAPPLLPPLELEVGYQYVNDAAFDYRHFLTVGAQARFDSLRLLGTVRVDPSEGNTQVRLGGAW RLLGAPERALSGTDGSALDVEAFGQFHRYPTEGFALISGEVALRGRLAMSRISPAMAGSFAEVSVGTSAEAYTYPGAVSD GNLHEQLLFTFGYGVWLGRGGPFRGEAMLYYDHRKDSFAGGIRSRGGGIVGAFGLRGRALLTDDWGVAAEVQGGGALVGR LSLIRALGGER >Mature_410_residues PAGGGGRPLAEKEASPMVSELPLRSRWGAVCLSGVLLFSTPGLARGGDGSPEVPVDAPLQAHVGPSQQSLAQVPPPPSER PDFKPLAVAVAVVPGLLFHGLGPLVAGDRHTAKRLFALEGAGLGLIALGGVPIALTGASRRTIAPLYAVTLAGFSVLGIS ALANLYAVTAPAFDAGVAPPLLPPLELEVGYQYVNDAAFDYRHFLTVGAQARFDSLRLLGTVRVDPSEGNTQVRLGGAWR LLGAPERALSGTDGSALDVEAFGQFHRYPTEGFALISGEVALRGRLAMSRISPAMAGSFAEVSVGTSAEAYTYPGAVSDG NLHEQLLFTFGYGVWLGRGGPFRGEAMLYYDHRKDSFAGGIRSRGGGIVGAFGLRGRALLTDDWGVAAEVQGGGALVGRL SLIRALGGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42514; Mature: 42383
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGGGGRPLAEKEASPMVSELPLRSRWGAVCLSGVLLFSTPGLARGGDGSPEVPVDAPL CCCCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCC QAHVGPSQQSLAQVPPPPSERPDFKPLAVAVAVVPGLLFHGLGPLVAGDRHTAKRLFALE CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEC GAGLGLIALGGVPIALTGASRRTIAPLYAVTLAGFSVLGISALANLYAVTAPAFDAGVAP CCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC PLLPPLELEVGYQYVNDAAFDYRHFLTVGAQARFDSLRLLGTVRVDPSEGNTQVRLGGAW CCCCCCEEEECHHHHCCHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCEEEECCEE RLLGAPERALSGTDGSALDVEAFGQFHRYPTEGFALISGEVALRGRLAMSRISPAMAGSF EECCCCHHHCCCCCCCEEEHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHCCHHHCCCC AEVSVGTSAEAYTYPGAVSDGNLHEQLLFTFGYGVWLGRGGPFRGEAMLYYDHRKDSFAG EEEECCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCCC GIRSRGGGIVGAFGLRGRALLTDDWGVAAEVQGGGALVGRLSLIRALGGER CHHCCCCCEEEECCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PAGGGGRPLAEKEASPMVSELPLRSRWGAVCLSGVLLFSTPGLARGGDGSPEVPVDAPL CCCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCC QAHVGPSQQSLAQVPPPPSERPDFKPLAVAVAVVPGLLFHGLGPLVAGDRHTAKRLFALE CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEC GAGLGLIALGGVPIALTGASRRTIAPLYAVTLAGFSVLGISALANLYAVTAPAFDAGVAP CCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC PLLPPLELEVGYQYVNDAAFDYRHFLTVGAQARFDSLRLLGTVRVDPSEGNTQVRLGGAW CCCCCCEEEECHHHHCCHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCEEEECCEE RLLGAPERALSGTDGSALDVEAFGQFHRYPTEGFALISGEVALRGRLAMSRISPAMAGSF EECCCCHHHCCCCCCCEEEHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHCCHHHCCCC AEVSVGTSAEAYTYPGAVSDGNLHEQLLFTFGYGVWLGRGGPFRGEAMLYYDHRKDSFAG EEEECCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCCC GIRSRGGGIVGAFGLRGRALLTDDWGVAAEVQGGGALVGRLSLIRALGGER CHHCCCCCEEEECCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA