Click here to switch to the map view.

The map label for this gene is frzCD [H]

Identifier: 108761813

GI number: 108761813

Start: 994630

End: 996525

Strand: Reverse

Name: frzCD [H]

Synonym: MXAN_0878

Alternate gene names: 108761813

Gene position: 996525-994630 (Counterclockwise)

Preceding gene: 108760779

Following gene: 108758675

Centisome position: 10.9

GC content: 69.88

Gene sequence:

>1896_bases
ATGGCCCTTTCTCTTCCTGGAACCAAGTCCCTTCGTGGACGCCTCACGCTCTACGCGACGCTGCTGTCGGTCGTCCCGCT
GCTGACGCTGACCTGGCTCCAGGCCCGCAGCGCGCGGCAGGTGATGGAAGAGCAGATTCACGCGTCGCTGCTGAGCGAGG
CCGAAGGCGTGAAGGACCTGCTGGAGTCGACGCTGGCCGAACGGGAGGCGAGCGCCCGCGGCTGGGCCGAGGACCCCGCG
GTCCGCGCCGCGCTGCGAGGTGACGTGTCGCCCGCCGACGCCATGCTCGGCGTGCTCCAGAGCCGCTACCTCACCCTCAA
CGGCATCGTCGTCTTCGACGACACCGGCCGCGCCATCTCCGCCAACACCCCTGCCCTGCGCGACGAATACCTGCGCCGGC
AGGACGAGGTGCGGCGCAGCCCCTGGTTCGCGGAGGCCCAGCAGGGGCGCACCAGCAGCGAGGGCATCACCGAGGAGCAC
CCCATCTTCACCGGCCACGTGCTGTCGCTGGCCTTCCCGGTGCTGGACCCGGTCTCCAAGCACCGGCTGGGCGTGCTGCT
GGCCGCCTTCGACTGGGCGCACGTGGACCAGTTGGTGCAGCCGGCGCTGGCCCGTGCCCATCAGCGCGCCCTGAAGAGCT
TCGCGATTACCCTCCAGCGGCCAGACGGCACGCCGCTGTACGACTCGCGCGGCGCGAACGCCCAGGGCAATGACGCGCTG
CTGGCCGTCACGGCCGTCAACGGCACGGACGTGCGCGACGTGGCCGACGGCTGGCACTTCGTGGCGCGCGTGGACCCGGC
GGAGGCCTACGCCCCGGTGGTGCGCGTGAACCGGGTGGCGCTGCTGATGGCACTAGGCTTCATCGTGCTGGCCGTCGGGG
GCGCGTGGCTGCTGTCGCACCGCATCTCCGGTCCCGTGCTGGCCCTGCGCGCGGCGGTGACGCGGCTGGTGAGCGAGGGC
GACCTCACGCAGACGCTGGACGTGAAGGCCGGCAACGACGAGGTGGGCGAGCTGGCCGGCGCCTTCGGCCTGCTGGTGTT
CCAGCTGCGGGAGACGGCGCAGAGCCTGCACACCGGCACGCGCGTGCTCAGTGAGACGGTGGCGGAGCTGCAGACGGCGT
CGACGCAGCAGGAGCGCAACGTGGCCCGTCAGGCCGCGGCCCTCCAGCAGACGCAGGTGACGGCGCAGGAAATCAAGCAG
ACGTCGATGCTGGCCTCGGAGAAGGCGGAGGACGTGCTCAATCGCGCCTCCGTGGCCGAAGAGGTGGGACGCGCGGGCGA
AGGGGCCATCCGGGACAGCCTGGGCGGCTTCTCCGAAATCCTGTCCCAGGCCGAGCAGATGACGGAGCGCATCGCCCAGC
TCAACGAGCGCACGCAGCAGATTGGCGGAATCACCCAGACCGTGAAGGACCTGGCGGACCAGTCCAACATGTTGGCGCTC
AACGCCGCCATCGAGTCCGTCCGCTCCGGCGAGCACGGCAAGGGCTTTGGCGTCGTGGCGCGCGAGATTCGCAGCCTGGC
GGACCAGTCCATCCAGGCCACGGACCGGGTCCGCGAAATCCTGGGCGATTTGAGCAGCGCCATCCTCTCCACCGCGAAGA
TGACGGAGCAGAGCTACACGCATATGGAGAGCGGCCTGGAGCAGGTGCGCGGCACCGGCGAGCGACTGAAGGAGCTGGCC
GCCATCATCCAGGACAACGCCACCGCGGTGCGGCAGATTGCCGGCGCGGTGAGTCAGCAGAACGCGGGCATCGCCCAGAT
TTTCAGCGCGGTCACGGACCTGTCCTCCATGATGAACGACACCCAGGAGAGCCTGGCGGCCACCACCCGGGCGGCGAAGC
TGCTCCAGGATGTGTCCGAGCAGATGCAGGACGTGGCCCGCGCTTATCGCATTTGA

Upstream 100 bases:

>100_bases
TGAGCAGGCAGGCGCGGGGGTGCCCTGGAGACGCGGGGCTCTGGTATAGGACGAGGGCCGACCTTTCTGGGAGGCCCCCG
CACGCTGCCCGCCGCGCCAC

Downstream 100 bases:

>100_bases
AGGAGCATGCATGGCGCAGGTGAAGGCAGTGCTGCTGGACCTGGGCAACGTCCTCGTCTTCCACGACAACACCCTGCTCT
TCTCCCGGCTGGGCGCCCGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MALSLPGTKSLRGRLTLYATLLSVVPLLTLTWLQARSARQVMEEQIHASLLSEAEGVKDLLESTLAEREASARGWAEDPA
VRAALRGDVSPADAMLGVLQSRYLTLNGIVVFDDTGRAISANTPALRDEYLRRQDEVRRSPWFAEAQQGRTSSEGITEEH
PIFTGHVLSLAFPVLDPVSKHRLGVLLAAFDWAHVDQLVQPALARAHQRALKSFAITLQRPDGTPLYDSRGANAQGNDAL
LAVTAVNGTDVRDVADGWHFVARVDPAEAYAPVVRVNRVALLMALGFIVLAVGGAWLLSHRISGPVLALRAAVTRLVSEG
DLTQTLDVKAGNDEVGELAGAFGLLVFQLRETAQSLHTGTRVLSETVAELQTASTQQERNVARQAAALQQTQVTAQEIKQ
TSMLASEKAEDVLNRASVAEEVGRAGEGAIRDSLGGFSEILSQAEQMTERIAQLNERTQQIGGITQTVKDLADQSNMLAL
NAAIESVRSGEHGKGFGVVAREIRSLADQSIQATDRVREILGDLSSAILSTAKMTEQSYTHMESGLEQVRGTGERLKELA
AIIQDNATAVRQIAGAVSQQNAGIAQIFSAVTDLSSMMNDTQESLAATTRAAKLLQDVSEQMQDVARAYRI

Sequences:

>Translated_631_residues
MALSLPGTKSLRGRLTLYATLLSVVPLLTLTWLQARSARQVMEEQIHASLLSEAEGVKDLLESTLAEREASARGWAEDPA
VRAALRGDVSPADAMLGVLQSRYLTLNGIVVFDDTGRAISANTPALRDEYLRRQDEVRRSPWFAEAQQGRTSSEGITEEH
PIFTGHVLSLAFPVLDPVSKHRLGVLLAAFDWAHVDQLVQPALARAHQRALKSFAITLQRPDGTPLYDSRGANAQGNDAL
LAVTAVNGTDVRDVADGWHFVARVDPAEAYAPVVRVNRVALLMALGFIVLAVGGAWLLSHRISGPVLALRAAVTRLVSEG
DLTQTLDVKAGNDEVGELAGAFGLLVFQLRETAQSLHTGTRVLSETVAELQTASTQQERNVARQAAALQQTQVTAQEIKQ
TSMLASEKAEDVLNRASVAEEVGRAGEGAIRDSLGGFSEILSQAEQMTERIAQLNERTQQIGGITQTVKDLADQSNMLAL
NAAIESVRSGEHGKGFGVVAREIRSLADQSIQATDRVREILGDLSSAILSTAKMTEQSYTHMESGLEQVRGTGERLKELA
AIIQDNATAVRQIAGAVSQQNAGIAQIFSAVTDLSSMMNDTQESLAATTRAAKLLQDVSEQMQDVARAYRI
>Mature_630_residues
ALSLPGTKSLRGRLTLYATLLSVVPLLTLTWLQARSARQVMEEQIHASLLSEAEGVKDLLESTLAEREASARGWAEDPAV
RAALRGDVSPADAMLGVLQSRYLTLNGIVVFDDTGRAISANTPALRDEYLRRQDEVRRSPWFAEAQQGRTSSEGITEEHP
IFTGHVLSLAFPVLDPVSKHRLGVLLAAFDWAHVDQLVQPALARAHQRALKSFAITLQRPDGTPLYDSRGANAQGNDALL
AVTAVNGTDVRDVADGWHFVARVDPAEAYAPVVRVNRVALLMALGFIVLAVGGAWLLSHRISGPVLALRAAVTRLVSEGD
LTQTLDVKAGNDEVGELAGAFGLLVFQLRETAQSLHTGTRVLSETVAELQTASTQQERNVARQAAALQQTQVTAQEIKQT
SMLASEKAEDVLNRASVAEEVGRAGEGAIRDSLGGFSEILSQAEQMTERIAQLNERTQQIGGITQTVKDLADQSNMLALN
AAIESVRSGEHGKGFGVVAREIRSLADQSIQATDRVREILGDLSSAILSTAKMTEQSYTHMESGLEQVRGTGERLKELAA
IIQDNATAVRQIAGAVSQQNAGIAQIFSAVTDLSSMMNDTQESLAATTRAAKLLQDVSEQMQDVARAYRI

Specific function: Methyl-accepting taxis protein necessary for the proper aggregation of cells to form fruiting bodies. Frz genes define a system of signal transduction analogous to the enterobacterial chemotaxis systems [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=293, Percent_Identity=27.9863481228669, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI2367378, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787690, Length=322, Percent_Identity=25.4658385093168, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI1788195, Length=302, Percent_Identity=25.8278145695364, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=309, Percent_Identity=24.5954692556634, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67912; Mature: 67780

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSLPGTKSLRGRLTLYATLLSVVPLLTLTWLQARSARQVMEEQIHASLLSEAEGVKDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESTLAEREASARGWAEDPAVRAALRGDVSPADAMLGVLQSRYLTLNGIVVFDDTGRAIS
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCEEEECCCCCEEC
ANTPALRDEYLRRQDEVRRSPWFAEAQQGRTSSEGITEEHPIFTGHVLSLAFPVLDPVSK
CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHH
HRLGVLLAAFDWAHVDQLVQPALARAHQRALKSFAITLQRPDGTPLYDSRGANAQGNDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCE
LAVTAVNGTDVRDVADGWHFVARVDPAEAYAPVVRVNRVALLMALGFIVLAVGGAWLLSH
EEEEECCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RISGPVLALRAAVTRLVSEGDLTQTLDVKAGNDEVGELAGAFGLLVFQLRETAQSLHTGT
HCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLSETVAELQTASTQQERNVARQAAALQQTQVTAQEIKQTSMLASEKAEDVLNRASVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVGRAGEGAIRDSLGGFSEILSQAEQMTERIAQLNERTQQIGGITQTVKDLADQSNMLAL
HHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHH
NAAIESVRSGEHGKGFGVVAREIRSLADQSIQATDRVREILGDLSSAILSTAKMTEQSYT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HMESGLEQVRGTGERLKELAAIIQDNATAVRQIAGAVSQQNAGIAQIFSAVTDLSSMMND
HHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TQESLAATTRAAKLLQDVSEQMQDVARAYRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSLPGTKSLRGRLTLYATLLSVVPLLTLTWLQARSARQVMEEQIHASLLSEAEGVKDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESTLAEREASARGWAEDPAVRAALRGDVSPADAMLGVLQSRYLTLNGIVVFDDTGRAIS
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCEEEECCCCCEEC
ANTPALRDEYLRRQDEVRRSPWFAEAQQGRTSSEGITEEHPIFTGHVLSLAFPVLDPVSK
CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHH
HRLGVLLAAFDWAHVDQLVQPALARAHQRALKSFAITLQRPDGTPLYDSRGANAQGNDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCE
LAVTAVNGTDVRDVADGWHFVARVDPAEAYAPVVRVNRVALLMALGFIVLAVGGAWLLSH
EEEEECCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RISGPVLALRAAVTRLVSEGDLTQTLDVKAGNDEVGELAGAFGLLVFQLRETAQSLHTGT
HCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLSETVAELQTASTQQERNVARQAAALQQTQVTAQEIKQTSMLASEKAEDVLNRASVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVGRAGEGAIRDSLGGFSEILSQAEQMTERIAQLNERTQQIGGITQTVKDLADQSNMLAL
HHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHH
NAAIESVRSGEHGKGFGVVAREIRSLADQSIQATDRVREILGDLSSAILSTAKMTEQSYT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HMESGLEQVRGTGERLKELAAIIQDNATAVRQIAGAVSQQNAGIAQIFSAVTDLSSMMND
HHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TQESLAATTRAAKLLQDVSEQMQDVARAYRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2492105; 1624419 [H]