| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yihX [H]
Identifier: 108758675
GI number: 108758675
Start: 994020
End: 994619
Strand: Reverse
Name: yihX [H]
Synonym: MXAN_0877
Alternate gene names: 108758675
Gene position: 994619-994020 (Counterclockwise)
Preceding gene: 108761813
Following gene: 108756891
Centisome position: 10.88
GC content: 70.83
Gene sequence:
>600_bases ATGGCGCAGGTGAAGGCAGTGCTGCTGGACCTGGGCAACGTCCTCGTCTTCCACGACAACACCCTGCTCTTCTCCCGGCT GGGCGCCCGCGCGGGCCTGGAGGCCGCGGAGGTGGCCCGGCGGCTGACGGGCGCGGGGTGGACGGACGCCAACCGGGGCG TGCTGGGCGCGGAGGGCATCCGCCAGGACGTGTGTCGCGCGCTGGACGTGGACCTGCCCATGGCGGAGTTCGCCCCGCTG TGGAGCAGCCACTTCACGCTGCATGATGCCGTGCTGCCGCGCATCGAGTCGCTGGTGGGCCGGGTGCGCCTGGGGCTGGT GTCCAACACCAACGCGCTGCACGTCGCCTACCTGCGTCCGCTGCTGCCGGTGCTCCAGCGCTTCGACAGCGTGGTGATGA GCTGCGAGGTGGGCCACGTGAAGCCGGAGCCGGACATCTTCCGGCTCGCGCTGACGGGCGTGGGCTGCGCCCCGGAGGAG GCCGTCTTCTTCGACGACCTGGCCGAGTTCGTCCAGGCCGCCGAGGCTGTGGGGATTCAAGGCCGGCTCTTCACCACCGC TGACGCCTTCGACGCGCAGCTCAAGGCACTGGGTCTATGA
Upstream 100 bases:
>100_bases GAGAGCCTGGCGGCCACCACCCGGGCGGCGAAGCTGCTCCAGGATGTGTCCGAGCAGATGCAGGACGTGGCCCGCGCTTA TCGCATTTGAAGGAGCATGC
Downstream 100 bases:
>100_bases AGCTGGGCGGCTACGTCCTCCACCGGAACAACCGGGACACGTTGGAGCCGTGCCTGCGCGGGCTGCTGGCGCTCTGCGAT GACGTGGTGGCGCTGGACTC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MAQVKAVLLDLGNVLVFHDNTLLFSRLGARAGLEAAEVARRLTGAGWTDANRGVLGAEGIRQDVCRALDVDLPMAEFAPL WSSHFTLHDAVLPRIESLVGRVRLGLVSNTNALHVAYLRPLLPVLQRFDSVVMSCEVGHVKPEPDIFRLALTGVGCAPEE AVFFDDLAEFVQAAEAVGIQGRLFTTADAFDAQLKALGL
Sequences:
>Translated_199_residues MAQVKAVLLDLGNVLVFHDNTLLFSRLGARAGLEAAEVARRLTGAGWTDANRGVLGAEGIRQDVCRALDVDLPMAEFAPL WSSHFTLHDAVLPRIESLVGRVRLGLVSNTNALHVAYLRPLLPVLQRFDSVVMSCEVGHVKPEPDIFRLALTGVGCAPEE AVFFDDLAEFVQAAEAVGIQGRLFTTADAFDAQLKALGL >Mature_198_residues AQVKAVLLDLGNVLVFHDNTLLFSRLGARAGLEAAEVARRLTGAGWTDANRGVLGAEGIRQDVCRALDVDLPMAEFAPLW SSHFTLHDAVLPRIESLVGRVRLGLVSNTNALHVAYLRPLLPVLQRFDSVVMSCEVGHVKPEPDIFRLALTGVGCAPEEA VFFDDLAEFVQAAEAVGIQGRLFTTADAFDAQLKALGL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 21444; Mature: 21313
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVKAVLLDLGNVLVFHDNTLLFSRLGARAGLEAAEVARRLTGAGWTDANRGVLGAEGI CCHHHHHHHHHCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH RQDVCRALDVDLPMAEFAPLWSSHFTLHDAVLPRIESLVGRVRLGLVSNTNALHVAYLRP HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH LLPVLQRFDSVVMSCEVGHVKPEPDIFRLALTGVGCAPEEAVFFDDLAEFVQAAEAVGIQ HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC GRLFTTADAFDAQLKALGL CEEEECCHHHHHHHHHCCC >Mature Secondary Structure AQVKAVLLDLGNVLVFHDNTLLFSRLGARAGLEAAEVARRLTGAGWTDANRGVLGAEGI CHHHHHHHHHCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH RQDVCRALDVDLPMAEFAPLWSSHFTLHDAVLPRIESLVGRVRLGLVSNTNALHVAYLRP HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH LLPVLQRFDSVVMSCEVGHVKPEPDIFRLALTGVGCAPEEAVFFDDLAEFVQAAEAVGIQ HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC GRLFTTADAFDAQLKALGL CEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]