| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761768
Identifier: 108761768
GI number: 108761768
Start: 1842635
End: 1844125
Strand: Reverse
Name: 108761768
Synonym: MXAN_1569
Alternate gene names: NA
Gene position: 1844125-1842635 (Counterclockwise)
Preceding gene: 108762761
Following gene: 108760039
Centisome position: 20.18
GC content: 69.55
Gene sequence:
>1491_bases ATGTCCCCCGCCGCCCTGGAGCGAGGGGCCGCCATCTTCCACGCAAGCTGCGAGTCATGTCACCGAGGGGGCGACGCGGA GACGGCATCGGGCGCGCCGCTGCGCGAACTGCCCTCGTACATGGGGCGCTTCTACGCGGCGAATCTCACATCACATGCCG AGGCGGGCATCGGCGCCATGACGGATGAAGCGCTGGCGCGAGCCATCCGCTACGCCGTGAGCCGCGACGGGCGGTTGATG GTGATGCCCAGCTACGGCATGGGCGACGCGGACCTGGCGGCGGTGCTGGGCTTCATGCGCTCCGGGCACCCGCTCTTCAC GCCGGATTCAGTGCCCGCGCCCCTGTCGAAGTTCAGCTTCTTCGGCGGTATTGGCTTCCGCTTCATCACCGGGAATGAGC CAGTGGAACGGCCCGCCTCGGGCATCCCCGTGCCGCCCAAGGCGGCGACCCGGGAGTACGGCCACTACATGGCGCATGAC GTCTATGACTGCGCCTCGTGTCACACGGATGGCTTCAGTCCTCGGAAGACGGAGGGCGATGACGTGTTCGCGGGAGGCAT GGCGTTCGTCGACCCGGAGGGAAGGAACGTTCATTCCAGCAACATCACGTTCCACGAGACGGGGCTGGCGCATTGGACGC TGGAGGACTTCACCCGCGCGGTGCGTGACGGACTGGCACCGGATGGCTCCGTGCTGCGCTCGCCCATGCCTCGCTTCCGG GGCATGGACGAGGTGGAGGCGCGAGCGCTCTACGACTATCTGCGCTCGGTGCCGCACAGGAAGAACGCGGTGAAGGGCGC GCGGCCGCGGCTCACCGCGGAGTCAGTCCGCCCGGACTGGGGCGCGGAGGAGATGGAGGAGCAGAGCGCGGAGGCACTCC CTGATGCGGTGCAGGCCAGCGCGCCCGATGAGACGCGCACGGGAGCTGTTCCCAACGCCAGCTCCTCCGTGAAGGGAGCA GGGGAAGAAACCTCGGGTCCGCTGGTTTCCCCCGCGCAACCTCCGGCCAACCATGAGGGCACACGGGGAGAAGACGCCCA TGCCGCAGTGACGTCTTCGGCCTCGGCGACCGCTTCCGGCTCGGCGATGCACACAGCGCCCGGAGCCACCGACAAGAGCG CGGCATCGGCACCGTCCGCGAAACACGATGCGGCCAACACCGCTGCGGCCGGTCCCTCGACGCTGGCCAGCAAGCCCACC CCCACCCGTAAGCCGCGCCCCGCTGCGCCCAAGGTGGACGCCCCCGCCCTCTTCGTGAAGCTCGGCTGCGCGAGCTGCCA CGCGCCTGGCGCGCGGTATCACGACCGGCTCGCCAAGGTCTCCTCGCGCAGCGAGGCCGAGCTGGTCCGATGGGTGCGAA ACCCCGAGCAGTTCCTCCCCGGCACGCCCATGCCCACCTACGCGGAGTTGATTGACGAGAAGACCGCGCGTGCGCTGGTG CGCTGGGTGAAGGCGGGAGGCCTGGCCACGCTGCCCTCCACCTCGCGCTGA
Upstream 100 bases:
>100_bases CATCCTGGACGCCATGAGGAACACGTTGTTCGTGGGCGCCGCCCTGCTGGCGGGCTGCGCGGGAACCGTTCATGCCCCCT ACCCGCCCATCCGCGCGGAC
Downstream 100 bases:
>100_bases GCCGCGCCCCGACGCACGCGGAAAAAACGACCCGGAAATGACCGAGGAAAACCCCTGCTGGCGTATCCCGTCTGGAAGTT CTCAGCGGGCACCTCGTCGA
Product: putative cytochrome c
Products: NA
Alternate protein names: Cytochrome C Class I; Cytochrome C; Cytochrome C Family Protein; Cytochrome C-Related Protein; Oxidoreductase Dehydrogenase Signal Peptide Protein; Class I Diheme Cytochrome C; Oxidoreductase Dehydrogenase Protein
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSPAALERGAAIFHASCESCHRGGDAETASGAPLRELPSYMGRFYAANLTSHAEAGIGAMTDEALARAIRYAVSRDGRLM VMPSYGMGDADLAAVLGFMRSGHPLFTPDSVPAPLSKFSFFGGIGFRFITGNEPVERPASGIPVPPKAATREYGHYMAHD VYDCASCHTDGFSPRKTEGDDVFAGGMAFVDPEGRNVHSSNITFHETGLAHWTLEDFTRAVRDGLAPDGSVLRSPMPRFR GMDEVEARALYDYLRSVPHRKNAVKGARPRLTAESVRPDWGAEEMEEQSAEALPDAVQASAPDETRTGAVPNASSSVKGA GEETSGPLVSPAQPPANHEGTRGEDAHAAVTSSASATASGSAMHTAPGATDKSAASAPSAKHDAANTAAAGPSTLASKPT PTRKPRPAAPKVDAPALFVKLGCASCHAPGARYHDRLAKVSSRSEAELVRWVRNPEQFLPGTPMPTYAELIDEKTARALV RWVKAGGLATLPSTSR
Sequences:
>Translated_496_residues MSPAALERGAAIFHASCESCHRGGDAETASGAPLRELPSYMGRFYAANLTSHAEAGIGAMTDEALARAIRYAVSRDGRLM VMPSYGMGDADLAAVLGFMRSGHPLFTPDSVPAPLSKFSFFGGIGFRFITGNEPVERPASGIPVPPKAATREYGHYMAHD VYDCASCHTDGFSPRKTEGDDVFAGGMAFVDPEGRNVHSSNITFHETGLAHWTLEDFTRAVRDGLAPDGSVLRSPMPRFR GMDEVEARALYDYLRSVPHRKNAVKGARPRLTAESVRPDWGAEEMEEQSAEALPDAVQASAPDETRTGAVPNASSSVKGA GEETSGPLVSPAQPPANHEGTRGEDAHAAVTSSASATASGSAMHTAPGATDKSAASAPSAKHDAANTAAAGPSTLASKPT PTRKPRPAAPKVDAPALFVKLGCASCHAPGARYHDRLAKVSSRSEAELVRWVRNPEQFLPGTPMPTYAELIDEKTARALV RWVKAGGLATLPSTSR >Mature_495_residues SPAALERGAAIFHASCESCHRGGDAETASGAPLRELPSYMGRFYAANLTSHAEAGIGAMTDEALARAIRYAVSRDGRLMV MPSYGMGDADLAAVLGFMRSGHPLFTPDSVPAPLSKFSFFGGIGFRFITGNEPVERPASGIPVPPKAATREYGHYMAHDV YDCASCHTDGFSPRKTEGDDVFAGGMAFVDPEGRNVHSSNITFHETGLAHWTLEDFTRAVRDGLAPDGSVLRSPMPRFRG MDEVEARALYDYLRSVPHRKNAVKGARPRLTAESVRPDWGAEEMEEQSAEALPDAVQASAPDETRTGAVPNASSSVKGAG EETSGPLVSPAQPPANHEGTRGEDAHAAVTSSASATASGSAMHTAPGATDKSAASAPSAKHDAANTAAAGPSTLASKPTP TRKPRPAAPKVDAPALFVKLGCASCHAPGARYHDRLAKVSSRSEAELVRWVRNPEQFLPGTPMPTYAELIDEKTARALVR WVKAGGLATLPSTSR
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52226; Mature: 52094
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAALERGAAIFHASCESCHRGGDAETASGAPLRELPSYMGRFYAANLTSHAEAGIGAM CCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHH TDEALARAIRYAVSRDGRLMVMPSYGMGDADLAAVLGFMRSGHPLFTPDSVPAPLSKFSF HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FGGIGFRFITGNEPVERPASGIPVPPKAATREYGHYMAHDVYDCASCHTDGFSPRKTEGD HCCCCEEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DVFAGGMAFVDPEGRNVHSSNITFHETGLAHWTLEDFTRAVRDGLAPDGSVLRSPMPRFR CEEECCEEEECCCCCCEECCCCEEEECCCCEEEHHHHHHHHHHCCCCCHHHHHCCCHHHC GMDEVEARALYDYLRSVPHRKNAVKGARPRLTAESVRPDWGAEEMEEQSAEALPDAVQAS CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCC APDETRTGAVPNASSSVKGAGEETSGPLVSPAQPPANHEGTRGEDAHAAVTSSASATASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC SAMHTAPGATDKSAASAPSAKHDAANTAAAGPSTLASKPTPTRKPRPAAPKVDAPALFVK CEEECCCCCCCCHHCCCCCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEE LGCASCHAPGARYHDRLAKVSSRSEAELVRWVRNPEQFLPGTPMPTYAELIDEKTARALV ECHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHH RWVKAGGLATLPSTSR HHHHHCCCCCCCCCCC >Mature Secondary Structure SPAALERGAAIFHASCESCHRGGDAETASGAPLRELPSYMGRFYAANLTSHAEAGIGAM CCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHH TDEALARAIRYAVSRDGRLMVMPSYGMGDADLAAVLGFMRSGHPLFTPDSVPAPLSKFSF HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FGGIGFRFITGNEPVERPASGIPVPPKAATREYGHYMAHDVYDCASCHTDGFSPRKTEGD HCCCCEEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DVFAGGMAFVDPEGRNVHSSNITFHETGLAHWTLEDFTRAVRDGLAPDGSVLRSPMPRFR CEEECCEEEECCCCCCEECCCCEEEECCCCEEEHHHHHHHHHHCCCCCHHHHHCCCHHHC GMDEVEARALYDYLRSVPHRKNAVKGARPRLTAESVRPDWGAEEMEEQSAEALPDAVQAS CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCC APDETRTGAVPNASSSVKGAGEETSGPLVSPAQPPANHEGTRGEDAHAAVTSSASATASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC SAMHTAPGATDKSAASAPSAKHDAANTAAAGPSTLASKPTPTRKPRPAAPKVDAPALFVK CEEECCCCCCCCHHCCCCCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEE LGCASCHAPGARYHDRLAKVSSRSEAELVRWVRNPEQFLPGTPMPTYAELIDEKTARALV ECHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHH RWVKAGGLATLPSTSR HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA