| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761638
Identifier: 108761638
GI number: 108761638
Start: 638560
End: 639390
Strand: Reverse
Name: 108761638
Synonym: MXAN_0555
Alternate gene names: NA
Gene position: 639390-638560 (Counterclockwise)
Preceding gene: 108757615
Following gene: 108763362
Centisome position: 7.0
GC content: 69.19
Gene sequence:
>831_bases ATGTTCTCCTCCCAGACGTTCTTCTTCGCCGTGGTGGGCGACGTCCACGGGCACATGCACCAGATGGTGAGTCACCTCAC TGCCTGGGAGGAACGCAGCCGCAGGCCGCTCGACTTCGTGCTCCAGGTGGGCGACTTCGAGCCCCACCGTCACAACGCCG ACCTGGCCACCATGGCCGCACCCACGAAGTACAGGCACCTGGGGGACTTCGCGGCCTACCACCAGCGACGACGCCGCTTC CCCTGGCCCGTCTACTTCATCGGCGGCAACCACGAGCCCTACGGCCACCTCGACCTGTACCCCGAGGGATTCGCGCTGGC GCCGCACTGTCACTACCTGGGCCGGAGCGGCGTGGTGGAGTTGAACGGCCTCCGCGTGGCGGGCCTGTCCGGCATCCACC GAGAAGCCACCTTCTGCAAGTCCCGCCCGCCGCTGGCCTCGATGGGCGACGTGTCCAACAAGGACTTCACCTTCTTCAAC GAAGAGGACGTCGAGCGAGTCCTGGCGCTCGGGCGCGCGGACGTGCTCCTGCTGCATGACTGGCCCTCCGGCATCATCCC GCCCGAGGAGGCCGCGGACTTCCAGGGACAGCGCCGCGGCGCGAGCCACGACCTCGTCGGCAACGCGTACGCGCGGCTGC TGGTGGACGCGCTCCAACCCCGGCTGGTCCTCTGTGGCCACCTGCACCGGCGCTACGCAGGCACCGTCCAGCACCCCGGC GGCCAGCGTTCGCTCGTGCGGTGCCTCGCCAGCGTGGAGCAGGGCGCGGAAGCGTTCGCGGTCTTCCAGTGCCGCGAGGG CACGCTCCAGGAAATCGCCATGTGGGAGTGA
Upstream 100 bases:
>100_bases GGAGCCCTCTGAGGCCACCGCACACTGCCCTCCCGTCAGTCCCGAAGCACCGCCCCCGTCCGCGCCCGCGACTCAAGCCT GAACCGGAACGGAAACCGCC
Downstream 100 bases:
>100_bases CACCGGGTGGACAACGCGACGCGCCACCCTGCCCGACTTGCGCTGGCGAGTCGCCGGGGACGGACACCACGCCCGCACAC AAGCCGAGCGCCGCGCGACC
Product: metallophosphoesterase
Products: NA
Alternate protein names: Serine/Threonine Protein Phosphatase Family Protein; RNA Lariat Debranching
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MFSSQTFFFAVVGDVHGHMHQMVSHLTAWEERSRRPLDFVLQVGDFEPHRHNADLATMAAPTKYRHLGDFAAYHQRRRRF PWPVYFIGGNHEPYGHLDLYPEGFALAPHCHYLGRSGVVELNGLRVAGLSGIHREATFCKSRPPLASMGDVSNKDFTFFN EEDVERVLALGRADVLLLHDWPSGIIPPEEAADFQGQRRGASHDLVGNAYARLLVDALQPRLVLCGHLHRRYAGTVQHPG GQRSLVRCLASVEQGAEAFAVFQCREGTLQEIAMWE
Sequences:
>Translated_276_residues MFSSQTFFFAVVGDVHGHMHQMVSHLTAWEERSRRPLDFVLQVGDFEPHRHNADLATMAAPTKYRHLGDFAAYHQRRRRF PWPVYFIGGNHEPYGHLDLYPEGFALAPHCHYLGRSGVVELNGLRVAGLSGIHREATFCKSRPPLASMGDVSNKDFTFFN EEDVERVLALGRADVLLLHDWPSGIIPPEEAADFQGQRRGASHDLVGNAYARLLVDALQPRLVLCGHLHRRYAGTVQHPG GQRSLVRCLASVEQGAEAFAVFQCREGTLQEIAMWE >Mature_276_residues MFSSQTFFFAVVGDVHGHMHQMVSHLTAWEERSRRPLDFVLQVGDFEPHRHNADLATMAAPTKYRHLGDFAAYHQRRRRF PWPVYFIGGNHEPYGHLDLYPEGFALAPHCHYLGRSGVVELNGLRVAGLSGIHREATFCKSRPPLASMGDVSNKDFTFFN EEDVERVLALGRADVLLLHDWPSGIIPPEEAADFQGQRRGASHDLVGNAYARLLVDALQPRLVLCGHLHRRYAGTVQHPG GQRSLVRCLASVEQGAEAFAVFQCREGTLQEIAMWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56549113, Length=239, Percent_Identity=31.3807531380753, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25145810, Length=247, Percent_Identity=31.5789473684211, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6322700, Length=239, Percent_Identity=30.5439330543933, Blast_Score=129, Evalue=5e-31, Organism=Drosophila melanogaster, GI45552991, Length=240, Percent_Identity=32.0833333333333, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24660629, Length=240, Percent_Identity=32.0833333333333, Blast_Score=125, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31063; Mature: 31063
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSQTFFFAVVGDVHGHMHQMVSHLTAWEERSRRPLDFVLQVGDFEPHRHNADLATMAA CCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCC PTKYRHLGDFAAYHQRRRRFPWPVYFIGGNHEPYGHLDLYPEGFALAPHCHYLGRSGVVE CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCCCCEECCHHHHCCCCCEEE LNGLRVAGLSGIHREATFCKSRPPLASMGDVSNKDFTFFNEEDVERVLALGRADVLLLHD ECCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCEEEEEC WPSGIIPPEEAADFQGQRRGASHDLVGNAYARLLVDALQPRLVLCGHLHRRYAGTVQHPG CCCCCCCCHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC GQRSLVRCLASVEQGAEAFAVFQCREGTLQEIAMWE CHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCC >Mature Secondary Structure MFSSQTFFFAVVGDVHGHMHQMVSHLTAWEERSRRPLDFVLQVGDFEPHRHNADLATMAA CCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCC PTKYRHLGDFAAYHQRRRRFPWPVYFIGGNHEPYGHLDLYPEGFALAPHCHYLGRSGVVE CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCCCCEECCHHHHCCCCCEEE LNGLRVAGLSGIHREATFCKSRPPLASMGDVSNKDFTFFNEEDVERVLALGRADVLLLHD ECCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCEEEEEC WPSGIIPPEEAADFQGQRRGASHDLVGNAYARLLVDALQPRLVLCGHLHRRYAGTVQHPG CCCCCCCCHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC GQRSLVRCLASVEQGAEAFAVFQCREGTLQEIAMWE CHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA