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The map label for this gene is recJ [H]

Identifier: 108761402

GI number: 108761402

Start: 5874905

End: 5876626

Strand: Reverse

Name: recJ [H]

Synonym: MXAN_4688

Alternate gene names: 108761402

Gene position: 5876626-5874905 (Counterclockwise)

Preceding gene: 108763901

Following gene: 108761988

Centisome position: 64.3

GC content: 70.62

Gene sequence:

>1722_bases
GTGTCGAGCGTGCGGTGGTTGCTTCCAGATGTGGTCGAGCAGGAAGTGGCGTCCCTCGCGGGGGAGTTGTCACTGCACCC
GCTCGCGGCGAAGGTGCTCCTGCACCGTGGCTACCGCACCCCCGAGTCCGCGTCGGCGTTCCTGTCGGACCGGTTGGCGG
ACCTGCCGGACCCGTTCCGCATGAAGGGGATGCCGGGAGCGGTGGACCGCATCATCCGGGCGATTCGTTCGCGGGAGAAG
GTGACGCTCTACGGTGACTACGACGTGGACGGCGTCTGCTCCACGTCGCTGCTGTACCTCTTCATGAAGGAGCTGGGCGC
GCCGCCCGCGACGTACATCCCCCACCGGCTGGACGAAGGCTACGGCCTCAACGTCGGCGCGGTGGAGCGCATCGCCGCGG
AGGGCACGCGGGTGCTGGTGACGCTGGACTGCGGCATCACCTCGGTGGCGGAAATCACCCGCGCCAAGGAGCTGGGCCTG
GACGTGCTGGTGGTGGACCACCACACCGTGCCGCCCACGCTGCCGCCCGCGGTGGCGGTGCTCAACCCGCACCAGCCTGG
CTGCGAGTACCCGACGAAGGCGCTGTGCGCCGCGGGCGTGGCCTTCAACTTCTGCATGGGCATCCGCAAGCGCCTGCGCG
ACGAGGGCTTCTTCGCCACCCGGAAGGAGCCCAACCTCCGGTCCATGATGGACCTGGTGGCGCTGGCCACGGTGGCGGAC
GTGGTGCCGCTCACCGGCGCCAACCGCATCCTGGTGACGCATGGCCTCCAGGAGCTGAGCGCGGGCCGCCGGCCGGGCGT
GCGGGCCTTGAAGGAAGTGGCGGGCATGGACCCGGACGCCTCCGTCACCGCGGGTCAGGTGGGTTTCCGCCTGGGGCCCC
GCATCAACGCGGCGGGCCGGCTGCATGACGCCTCGCTGGGACTTCAGCTGCTGTGCTCGGAGTCACCGGAGACGGCGCGC
TCACTGGCCGCGGTGTTGGACAGGGCCAACGCGGAGCGCCAGGGCATCGAGAGCAGCATCCTCACGCAGGCGCTGGCCCA
GGCGGAGTCGCTGAAGGACGCGCGCGGCCTGGTGCTGTACGACGAAGGCTGGCACCCGGGCGTCATCGGCATCGTCGCCT
CGCGCGTGGTGGAGCGCTTCTACCGGCCCACCGTCATGGTGGGGGTGAAGGACGGCGTGGGGAAGGGCTCGGCGCGCAGC
ATCGAGGCCTTCCACCTTCATGACGCGCTCAGTGGCTGCGCGGAGCTGCTGACGCGCTTCGGCGGTCACAAGCACGCCGC
CGGGCTCACCATCGACGCGGAGCGGCTGCCCGCCTTCCGGGAGGCCTTTGAGAAGATTGCCTACCAGCGCCTCACGCCGG
AGGACCTCATCCCCCGGTGCCGCGTGGACGCGGTGGTGAATCCCAACGAGTTGGACGCTCATGCCGTTGAGTCGCTCCAG
CGGCTGGGCCCCTTCGGGCAGGGCAATCCGGAGCCCGTGCTGGTGCTGCGCCGGCAAGTGGCTCGCCCGCGCGTGCTGCA
GCCCAAGTCCGGCACGGGCAGCGGCCATCTCAAGCTCGCCCTGGCGGACGCACCGGAGCTGGACGCCATCGGCTTCAACA
TGGCGGACCGGGCCACGCTGGTGGATGGCCCGGTGGACCTGGCGTTTCAGGCCGGCTTCGACACGTTCCGAGGCCAGCGC
AAGCTGTCTCTGCGGCTCAAGGACCTGCGCGTGGCCGCCTAG

Upstream 100 bases:

>100_bases
GTCGGGCTCAAGGTTGGACTGTCCTGGTCAGACGTCTGAGGTACTGTCGCTTTCGTAGCCAATTCATCCCGCCAACTCCC
CTCGGAGAAGGCGAGGAGGA

Downstream 100 bases:

>100_bases
CGGCCGTGACGCTCAGGCGATGCCCCAGCGGACGCGGCCCGGCGTCATCAGCGCGCCGACGCGGGCCAGTTCGTTGAAGC
GGAAGCGCTCCGCCTGCCTT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MSSVRWLLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFRMKGMPGAVDRIIRAIRSREK
VTLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEGYGLNVGAVERIAAEGTRVLVTLDCGITSVAEITRAKELGL
DVLVVDHHTVPPTLPPAVAVLNPHQPGCEYPTKALCAAGVAFNFCMGIRKRLRDEGFFATRKEPNLRSMMDLVALATVAD
VVPLTGANRILVTHGLQELSAGRRPGVRALKEVAGMDPDASVTAGQVGFRLGPRINAAGRLHDASLGLQLLCSESPETAR
SLAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLYDEGWHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARS
IEAFHLHDALSGCAELLTRFGGHKHAAGLTIDAERLPAFREAFEKIAYQRLTPEDLIPRCRVDAVVNPNELDAHAVESLQ
RLGPFGQGNPEPVLVLRRQVARPRVLQPKSGTGSGHLKLALADAPELDAIGFNMADRATLVDGPVDLAFQAGFDTFRGQR
KLSLRLKDLRVAA

Sequences:

>Translated_573_residues
MSSVRWLLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFRMKGMPGAVDRIIRAIRSREK
VTLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEGYGLNVGAVERIAAEGTRVLVTLDCGITSVAEITRAKELGL
DVLVVDHHTVPPTLPPAVAVLNPHQPGCEYPTKALCAAGVAFNFCMGIRKRLRDEGFFATRKEPNLRSMMDLVALATVAD
VVPLTGANRILVTHGLQELSAGRRPGVRALKEVAGMDPDASVTAGQVGFRLGPRINAAGRLHDASLGLQLLCSESPETAR
SLAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLYDEGWHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARS
IEAFHLHDALSGCAELLTRFGGHKHAAGLTIDAERLPAFREAFEKIAYQRLTPEDLIPRCRVDAVVNPNELDAHAVESLQ
RLGPFGQGNPEPVLVLRRQVARPRVLQPKSGTGSGHLKLALADAPELDAIGFNMADRATLVDGPVDLAFQAGFDTFRGQR
KLSLRLKDLRVAA
>Mature_572_residues
SSVRWLLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFRMKGMPGAVDRIIRAIRSREKV
TLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEGYGLNVGAVERIAAEGTRVLVTLDCGITSVAEITRAKELGLD
VLVVDHHTVPPTLPPAVAVLNPHQPGCEYPTKALCAAGVAFNFCMGIRKRLRDEGFFATRKEPNLRSMMDLVALATVADV
VPLTGANRILVTHGLQELSAGRRPGVRALKEVAGMDPDASVTAGQVGFRLGPRINAAGRLHDASLGLQLLCSESPETARS
LAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLYDEGWHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARSI
EAFHLHDALSGCAELLTRFGGHKHAAGLTIDAERLPAFREAFEKIAYQRLTPEDLIPRCRVDAVVNPNELDAHAVESLQR
LGPFGQGNPEPVLVLRRQVARPRVLQPKSGTGSGHLKLALADAPELDAIGFNMADRATLVDGPVDLAFQAGFDTFRGQRK
LSLRLKDLRVAA

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=576, Percent_Identity=38.0208333333333, Blast_Score=345, Evalue=4e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61740; Mature: 61609

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVRWLLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFR
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
MKGMPGAVDRIIRAIRSREKVTLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEG
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
YGLNVGAVERIAAEGTRVLVTLDCGITSVAEITRAKELGLDVLVVDHHTVPPTLPPAVAV
CCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEE
LNPHQPGCEYPTKALCAAGVAFNFCMGIRKRLRDEGFFATRKEPNLRSMMDLVALATVAD
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH
VVPLTGANRILVTHGLQELSAGRRPGVRALKEVAGMDPDASVTAGQVGFRLGPRINAAGR
HHCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCC
LHDASLGLQLLCSESPETARSLAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLY
CCHHHCCEEEEECCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHCCCCEEEE
DEGWHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARSIEAFHLHDALSGCAELLTRF
ECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GGHKHAAGLTIDAERLPAFREAFEKIAYQRLTPEDLIPRCRVDAVVNPNELDAHAVESLQ
CCCCCCCCCEEEHHHCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH
RLGPFGQGNPEPVLVLRRQVARPRVLQPKSGTGSGHLKLALADAPELDAIGFNMADRATL
HHCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEE
VDGPVDLAFQAGFDTFRGQRKLSLRLKDLRVAA
ECCCCCHHHHCCCHHHCCCCEEEEEEECCEECC
>Mature Secondary Structure 
SSVRWLLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFR
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
MKGMPGAVDRIIRAIRSREKVTLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEG
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
YGLNVGAVERIAAEGTRVLVTLDCGITSVAEITRAKELGLDVLVVDHHTVPPTLPPAVAV
CCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEE
LNPHQPGCEYPTKALCAAGVAFNFCMGIRKRLRDEGFFATRKEPNLRSMMDLVALATVAD
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH
VVPLTGANRILVTHGLQELSAGRRPGVRALKEVAGMDPDASVTAGQVGFRLGPRINAAGR
HHCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCC
LHDASLGLQLLCSESPETARSLAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLY
CCHHHCCEEEEECCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHCCCCEEEE
DEGWHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARSIEAFHLHDALSGCAELLTRF
ECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GGHKHAAGLTIDAERLPAFREAFEKIAYQRLTPEDLIPRCRVDAVVNPNELDAHAVESLQ
CCCCCCCCCEEEHHHCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH
RLGPFGQGNPEPVLVLRRQVARPRVLQPKSGTGSGHLKLALADAPELDAIGFNMADRATL
HHCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEE
VDGPVDLAFQAGFDTFRGQRKLSLRLKDLRVAA
ECCCCCHHHHCCCHHHCCCCEEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]