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The map label for this gene is secF [H]

Identifier: 108763901

GI number: 108763901

Start: 5877557

End: 5878735

Strand: Reverse

Name: secF [H]

Synonym: MXAN_4690

Alternate gene names: 108763901

Gene position: 5878735-5877557 (Counterclockwise)

Preceding gene: 108762794

Following gene: 108761402

Centisome position: 64.32

GC content: 65.48

Gene sequence:

>1179_bases
ATGCAGATTTTCAAGAACAAGACGAACATCGACTTCATCAGCAAGCGCAAGCCCGCGCTGTTTATCTCCACGCTGCTGAA
CCTGGCGATCATCGTCGGCATCGCCGCCTTCGGCTTCAACTTCGGCGTGGACTTCGCAGGTGGCACGGTGGTGGAGGTGA
AGTTCGACCACCCCATCACCGCCGAGGAGGTCCGTGAGCGCGCGGACAAGGGCGGCCTGCCAGACGTCAGCGTGCAGAAC
ATCGGCGCGGCGGAGGAGAACACCTTCCTGCTCCGCATGGGCGGCGTCACGCAGCTCAACGAGGAGAGCGGTGCCAAGGG
CAAGGAGGCCCTGGAGGCGCTGGGGGGCGTGCGCAACGTCTACTCGGATCTGCCCAACGGCATCATCCGCTTCCGCGCGG
CGCAGCCCATGGACTCCGACGCCGTCAAGAAGGCGGTGGAGTCGGCGGGCATCGGCGTGCAGGAAGTGCGTGACCTGGGC
GAGGCCCAGGGCGGCACGGGCTACGACTACCAGGTGGTGGCCAGCGGCATGGCGGACCGCGTGTTCGCCGCGCTCAACGC
CGGACTGGAGAAGCCGGACTTCGAGCAGCGCCGCGTGGACTACGTCGGTCCACAGGTGGGCAAGCAGCTGCGCAACCGCG
GCATCATGGCGCTGCTGTACTCGATGGTCGCCATCCTCATCTACGTGGCGTTCCGGTTCGACTTCAAGTTCGGTCCGGGC
GCGCTCTTGTCCATGGTCCATGACGTCATCATGGTGGCGGGCTACTACCTGGTGAGCCGGCGCGAGTTCAACCTGACGGC
CATCGCGGCGCTGCTGACGGTGGTCGGCTACTCCGTCAACGACACCATCGTCATCTACGACCGCATCCGCGAGGACATGG
CCAAGTACAAGGGCAAGCCCTTCGCGGAGGTCATCAACATCGCCATCAACGACACGCTGGGCCGCACCATCCTCACGTCC
GGCACCACGGCGCTGTCGCTCATCGGTCTGCTCATCTTCGGCGTGGGCGAAATCTTCGACTTCGCCATGGCGATGCTGGT
GGGCATCGTGGTCGGTGTGTACTCGACCATCTACATCGCCAGCCCGCTGACCATCTGGCTGGACGAGCGCGCCGCGGCGA
AGGACGCCCGTCTGCGCGCCAGCGGCAACGTGGACCACCAGCAGCCGAACGCCGCGTGA

Upstream 100 bases:

>100_bases
TCACGTCCATCACGGTGACGCGAGTCATCATGACCTACTTCGTCCACGGTCGTAACGCGAAGGTCGTCTCCGTCTGACCG
GCCGGAGTCCGGGAACCGTC

Downstream 100 bases:

>100_bases
GCCACCCGCACCTGAGGCCTTCCTTCCGTTGAGGAAGGCCTCGTGCGATGGACACCGACAGGGCCCTCTTCCTTCACGGG
AAGCAGGGCCCTGGGTGTTT

Product: protein-export membrane protein SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MQIFKNKTNIDFISKRKPALFISTLLNLAIIVGIAAFGFNFGVDFAGGTVVEVKFDHPITAEEVRERADKGGLPDVSVQN
IGAAEENTFLLRMGGVTQLNEESGAKGKEALEALGGVRNVYSDLPNGIIRFRAAQPMDSDAVKKAVESAGIGVQEVRDLG
EAQGGTGYDYQVVASGMADRVFAALNAGLEKPDFEQRRVDYVGPQVGKQLRNRGIMALLYSMVAILIYVAFRFDFKFGPG
ALLSMVHDVIMVAGYYLVSRREFNLTAIAALLTVVGYSVNDTIVIYDRIREDMAKYKGKPFAEVINIAINDTLGRTILTS
GTTALSLIGLLIFGVGEIFDFAMAMLVGIVVGVYSTIYIASPLTIWLDERAAAKDARLRASGNVDHQQPNAA

Sequences:

>Translated_392_residues
MQIFKNKTNIDFISKRKPALFISTLLNLAIIVGIAAFGFNFGVDFAGGTVVEVKFDHPITAEEVRERADKGGLPDVSVQN
IGAAEENTFLLRMGGVTQLNEESGAKGKEALEALGGVRNVYSDLPNGIIRFRAAQPMDSDAVKKAVESAGIGVQEVRDLG
EAQGGTGYDYQVVASGMADRVFAALNAGLEKPDFEQRRVDYVGPQVGKQLRNRGIMALLYSMVAILIYVAFRFDFKFGPG
ALLSMVHDVIMVAGYYLVSRREFNLTAIAALLTVVGYSVNDTIVIYDRIREDMAKYKGKPFAEVINIAINDTLGRTILTS
GTTALSLIGLLIFGVGEIFDFAMAMLVGIVVGVYSTIYIASPLTIWLDERAAAKDARLRASGNVDHQQPNAA
>Mature_392_residues
MQIFKNKTNIDFISKRKPALFISTLLNLAIIVGIAAFGFNFGVDFAGGTVVEVKFDHPITAEEVRERADKGGLPDVSVQN
IGAAEENTFLLRMGGVTQLNEESGAKGKEALEALGGVRNVYSDLPNGIIRFRAAQPMDSDAVKKAVESAGIGVQEVRDLG
EAQGGTGYDYQVVASGMADRVFAALNAGLEKPDFEQRRVDYVGPQVGKQLRNRGIMALLYSMVAILIYVAFRFDFKFGPG
ALLSMVHDVIMVAGYYLVSRREFNLTAIAALLTVVGYSVNDTIVIYDRIREDMAKYKGKPFAEVINIAINDTLGRTILTS
GTTALSLIGLLIFGVGEIFDFAMAMLVGIVVGVYSTIYIASPLTIWLDERAAAKDARLRASGNVDHQQPNAA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=249, Percent_Identity=34.5381526104418, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 42406; Mature: 42406

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIFKNKTNIDFISKRKPALFISTLLNLAIIVGIAAFGFNFGVDFAGGTVVEVKFDHPIT
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
AEEVRERADKGGLPDVSVQNIGAAEENTFLLRMGGVTQLNEESGAKGKEALEALGGVRNV
HHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHH
YSDLPNGIIRFRAAQPMDSDAVKKAVESAGIGVQEVRDLGEAQGGTGYDYQVVASGMADR
HHHCCCHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VFAALNAGLEKPDFEQRRVDYVGPQVGKQLRNRGIMALLYSMVAILIYVAFRFDFKFGPG
HHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
ALLSMVHDVIMVAGYYLVSRREFNLTAIAALLTVVGYSVNDTIVIYDRIREDMAKYKGKP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCC
FAEVINIAINDTLGRTILTSGTTALSLIGLLIFGVGEIFDFAMAMLVGIVVGVYSTIYIA
HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPLTIWLDERAAAKDARLRASGNVDHQQPNAA
CCEEEEECCHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure
MQIFKNKTNIDFISKRKPALFISTLLNLAIIVGIAAFGFNFGVDFAGGTVVEVKFDHPIT
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
AEEVRERADKGGLPDVSVQNIGAAEENTFLLRMGGVTQLNEESGAKGKEALEALGGVRNV
HHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHH
YSDLPNGIIRFRAAQPMDSDAVKKAVESAGIGVQEVRDLGEAQGGTGYDYQVVASGMADR
HHHCCCHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VFAALNAGLEKPDFEQRRVDYVGPQVGKQLRNRGIMALLYSMVAILIYVAFRFDFKFGPG
HHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
ALLSMVHDVIMVAGYYLVSRREFNLTAIAALLTVVGYSVNDTIVIYDRIREDMAKYKGKP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCC
FAEVINIAINDTLGRTILTSGTTALSLIGLLIFGVGEIFDFAMAMLVGIVVGVYSTIYIA
HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPLTIWLDERAAAKDARLRASGNVDHQQPNAA
CCEEEEECCHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]