| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pssA [H]
Identifier: 108761352
GI number: 108761352
Start: 3400622
End: 3401266
Strand: Direct
Name: pssA [H]
Synonym: MXAN_2907
Alternate gene names: 108761352
Gene position: 3400622-3401266 (Clockwise)
Preceding gene: 108756779
Following gene: 108758404
Centisome position: 37.21
GC content: 67.91
Gene sequence:
>645_bases ATGCCGACCGAGCCGTCCCGTGCCCGCCGCCCGCGCCGTCACTTTTCGATGATTCGCACGTTCGTGCTCGCTGACTTCGT GACGCTGGGCAACGGCTTCGCGGGCGCGGGCGCCATCCTCTCCGCCATGCAGTACCTGGCTTCCGGGGACGTGGGCTGGC TGTGGGTGGCCTTCGGCCTGATGCCGGTGGCGTTGGTGATGGACGTCATGGACGGGCGCATCGCGCGCTGGCGCTTCAAG AAGTCGCCGCTGGGCGCGGACCTGGACTCACTGGCGGACGTCATCTCCTTCGGCATGGCGCCGGCGGCGCTGGCCTTCGC GGTGGGGATGCGCGGCTCCCTGGACGTGGCGGCGCTCCTCTACTTCGTGGCGTGCGGCATCAGCCGGCTGGCGCGCTTCA ACGTCACGTCGGCGGACCTGTCGGACGAGACAGGGAAGGTGAAGTACTTCGAGGGCACCCCCATTCCCACCAGCCTGGCG CTGGTGATGGTGATGGCCGCGGCGACGTGGGCGGGGCGCATCGGTCCGGACCTGTGGGGTGGTGAGTGGCGCCTGGGACC GTTGGTCCTTCACCCGTTGGCGCTGATGTATGTGGCCAGCGGAAGTGCGATGATCAGCAAGACATTGCGCATTCCGAAGA TTTGA
Upstream 100 bases:
>100_bases TTCTGAAACTGGAATGATTTCTCACACCGCCGGGCACAACGCAGTGTGGCAAGAACGAGCTTCCGGCCGAGCGGGAGGGG TGTGGTAGGAAATCGCGCAT
Downstream 100 bases:
>100_bases TAGCGGACACCCACCCACCCCTGGGCACGGGGTTCCCCACGCATGGCCGGTTGCTCACCCTGAAGTGGGTGCCTAGCTTC GCCACCGTTCCTTCCGCCGT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPTEPSRARRPRRHFSMIRTFVLADFVTLGNGFAGAGAILSAMQYLASGDVGWLWVAFGLMPVALVMDVMDGRIARWRFK KSPLGADLDSLADVISFGMAPAALAFAVGMRGSLDVAALLYFVACGISRLARFNVTSADLSDETGKVKYFEGTPIPTSLA LVMVMAAATWAGRIGPDLWGGEWRLGPLVLHPLALMYVASGSAMISKTLRIPKI
Sequences:
>Translated_214_residues MPTEPSRARRPRRHFSMIRTFVLADFVTLGNGFAGAGAILSAMQYLASGDVGWLWVAFGLMPVALVMDVMDGRIARWRFK KSPLGADLDSLADVISFGMAPAALAFAVGMRGSLDVAALLYFVACGISRLARFNVTSADLSDETGKVKYFEGTPIPTSLA LVMVMAAATWAGRIGPDLWGGEWRLGPLVLHPLALMYVASGSAMISKTLRIPKI >Mature_213_residues PTEPSRARRPRRHFSMIRTFVLADFVTLGNGFAGAGAILSAMQYLASGDVGWLWVAFGLMPVALVMDVMDGRIARWRFKK SPLGADLDSLADVISFGMAPAALAFAVGMRGSLDVAALLYFVACGISRLARFNVTSADLSDETGKVKYFEGTPIPTSLAL VMVMAAATWAGRIGPDLWGGEWRLGPLVLHPLALMYVASGSAMISKTLRIPKI
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=214, Percent_Identity=43.4579439252336, Blast_Score=184, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 22967; Mature: 22836
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTEPSRARRPRRHFSMIRTFVLADFVTLGNGFAGAGAILSAMQYLASGDVGWLWVAFGL CCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH MPVALVMDVMDGRIARWRFKKSPLGADLDSLADVISFGMAPAALAFAVGMRGSLDVAALL HHHHHHHHHHCCHHHHHEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH YFVACGISRLARFNVTSADLSDETGKVKYFEGTPIPTSLALVMVMAAATWAGRIGPDLWG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC GEWRLGPLVLHPLALMYVASGSAMISKTLRIPKI CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure PTEPSRARRPRRHFSMIRTFVLADFVTLGNGFAGAGAILSAMQYLASGDVGWLWVAFGL CCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH MPVALVMDVMDGRIARWRFKKSPLGADLDSLADVISFGMAPAALAFAVGMRGSLDVAALL HHHHHHHHHHCCHHHHHEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH YFVACGISRLARFNVTSADLSDETGKVKYFEGTPIPTSLALVMVMAAATWAGRIGPDLWG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC GEWRLGPLVLHPLALMYVASGSAMISKTLRIPKI CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]