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The map label for this gene is ygdL [H]

Identifier: 108756779

GI number: 108756779

Start: 3396368

End: 3397279

Strand: Direct

Name: ygdL [H]

Synonym: MXAN_2904

Alternate gene names: 108756779

Gene position: 3396368-3397279 (Clockwise)

Preceding gene: 108758443

Following gene: 108761352

Centisome position: 37.16

GC content: 69.96

Gene sequence:

>912_bases
GTGGGGCTCTCGCCACCCTCCTGGGTGGGGGGCACATGGAAGCCAGACTTCAACGTGAGGCGGCCCATGTTCGAGCAGCG
GTTCCAGCGCAATCTGGGCGTGGTGGATGCGGAGACGCTGGACAAACTGTCACGCACGCATGTGTTGGTTGCGGGCGTGG
GCGGCGCGGGTGGCCAGTGCGCGGTGGACCTGGCGCGGTTGGGGGTCGGCGGCGTGACGCTGGCGGACTTCGACGTCTAC
GAGCGCCACAACATGAACCGGCAGGTGGGCTGCTTCGAAAGCACGTTGGGCCGCTCCAAGGTGGAGGTGGTGGGGCGGAT
GTGTCGGGACATCCACCCGGCGCTGCGGCTGCGGGAAGTGCCGGAGGGCATCACCGAGGCCAACGTGGAGGACGTGCTTG
GCGGGGGCGGCGTGCAGGGCCCGGTGGATTACGTGGTGGAGGTCATCGACATCGCGGGGGCGCATGAGAAGCAGGTGCTC
CACCGCGCCTGCCGCCAGCGTGGCGTGCCGGTGATGACGGGGCTGATGTTGGGATTCGGCGCGGCGCTGCACGTCTTCCA
GCCGGATGCGCCGCTGTACGAAGCGCTCTACATCCTGCCGGATGGACGCATCGACCTGCCGGCCATCATCCCCCACCTGG
GAAGCTACATGCTCCGCGAGTACATGGACGCGTGCTTCCAGGGCCGGGGCCACGCACCCACCTGCGTGGTGGGCGCGACG
AGCGCGGCGGGGATGATGGTGACGGAGTTGACGCGCGCGGTGATGCGGGGCCCCCGGTCCATGGTGTCGTGGCCGGAGTA
CCTCTATGTGGACTTCTTCGACCACAGCTTCGTCCGGGGCACCGCCGCGTCGGCCCTGGCGCGGCGGGTGGACCCGGCGT
CGCGGGCCGGAGGTGCCCCGGCCGCGAGCTGA

Upstream 100 bases:

>100_bases
ACCAGAACGGGCAAGAACCGATTAGCTCTCCAGTACGGGTGGACTGACGGGGTCCGAACGGCACCAGGTGACGTGGGAGG
GGTGCTGAACACACGCGCCC

Downstream 100 bases:

>100_bases
CGTCGCTGTTCGGAAGACGGGCCGCGCTCACACCACGCCGCGCGCCCGGGCCTCCTCGATGACCTTCACGCCGTCCACGC
CCAGGCTCTTGCCCAGGTAG

Product: ThiF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MGLSPPSWVGGTWKPDFNVRRPMFEQRFQRNLGVVDAETLDKLSRTHVLVAGVGGAGGQCAVDLARLGVGGVTLADFDVY
ERHNMNRQVGCFESTLGRSKVEVVGRMCRDIHPALRLREVPEGITEANVEDVLGGGGVQGPVDYVVEVIDIAGAHEKQVL
HRACRQRGVPVMTGLMLGFGAALHVFQPDAPLYEALYILPDGRIDLPAIIPHLGSYMLREYMDACFQGRGHAPTCVVGAT
SAAGMMVTELTRAVMRGPRSMVSWPEYLYVDFFDHSFVRGTAASALARRVDPASRAGGAPAAS

Sequences:

>Translated_303_residues
MGLSPPSWVGGTWKPDFNVRRPMFEQRFQRNLGVVDAETLDKLSRTHVLVAGVGGAGGQCAVDLARLGVGGVTLADFDVY
ERHNMNRQVGCFESTLGRSKVEVVGRMCRDIHPALRLREVPEGITEANVEDVLGGGGVQGPVDYVVEVIDIAGAHEKQVL
HRACRQRGVPVMTGLMLGFGAALHVFQPDAPLYEALYILPDGRIDLPAIIPHLGSYMLREYMDACFQGRGHAPTCVVGAT
SAAGMMVTELTRAVMRGPRSMVSWPEYLYVDFFDHSFVRGTAASALARRVDPASRAGGAPAAS
>Mature_302_residues
GLSPPSWVGGTWKPDFNVRRPMFEQRFQRNLGVVDAETLDKLSRTHVLVAGVGGAGGQCAVDLARLGVGGVTLADFDVYE
RHNMNRQVGCFESTLGRSKVEVVGRMCRDIHPALRLREVPEGITEANVEDVLGGGGVQGPVDYVVEVIDIAGAHEKQVLH
RACRQRGVPVMTGLMLGFGAALHVFQPDAPLYEALYILPDGRIDLPAIIPHLGSYMLREYMDACFQGRGHAPTCVVGATS
AAGMMVTELTRAVMRGPRSMVSWPEYLYVDFFDHSFVRGTAASALARRVDPASRAGGAPAAS

Specific function: Unknown

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=150, Percent_Identity=31.3333333333333, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87082356, Length=182, Percent_Identity=28.021978021978, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 32674; Mature: 32543

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSPPSWVGGTWKPDFNVRRPMFEQRFQRNLGVVDAETLDKLSRTHVLVAGVGGAGGQC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCCHH
AVDLARLGVGGVTLADFDVYERHNMNRQVGCFESTLGRSKVEVVGRMCRDIHPALRLREV
HHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
PEGITEANVEDVLGGGGVQGPVDYVVEVIDIAGAHEKQVLHRACRQRGVPVMTGLMLGFG
CCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AALHVFQPDAPLYEALYILPDGRIDLPAIIPHLGSYMLREYMDACFQGRGHAPTCVVGAT
HHHEEECCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
SAAGMMVTELTRAVMRGPRSMVSWPEYLYVDFFDHSFVRGTAASALARRVDPASRAGGAP
CHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEHHCCHHHHHHHHHHHHHHCCCHHHCCCCC
AAS
CCC
>Mature Secondary Structure 
GLSPPSWVGGTWKPDFNVRRPMFEQRFQRNLGVVDAETLDKLSRTHVLVAGVGGAGGQC
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCCHH
AVDLARLGVGGVTLADFDVYERHNMNRQVGCFESTLGRSKVEVVGRMCRDIHPALRLREV
HHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
PEGITEANVEDVLGGGGVQGPVDYVVEVIDIAGAHEKQVLHRACRQRGVPVMTGLMLGFG
CCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AALHVFQPDAPLYEALYILPDGRIDLPAIIPHLGSYMLREYMDACFQGRGHAPTCVVGAT
HHHEEECCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
SAAGMMVTELTRAVMRGPRSMVSWPEYLYVDFFDHSFVRGTAASALARRVDPASRAGGAP
CHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEHHCCHHHHHHHHHHHHHHCCCHHHCCCCC
AAS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]