| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761142
Identifier: 108761142
GI number: 108761142
Start: 2175538
End: 2176266
Strand: Reverse
Name: 108761142
Synonym: MXAN_1852
Alternate gene names: NA
Gene position: 2176266-2175538 (Counterclockwise)
Preceding gene: 108761447
Following gene: 108758744
Centisome position: 23.81
GC content: 69.0
Gene sequence:
>729_bases ATGGTTTCCTACGTCTCGCAGGAGGCGGCTCTCGAAGGCCTCTCTGAGCACGCGGCCCTCTACTGGCCCCGCGTGAAGGT GCTCAACCCCGCCCGCGGCGTCTTCGGCAACGTGGAGCAGCTCGTCGTCCCGCCCTCTGGAATCATCGCCGGCGTCTTCG CGCGCAACGACGCCGCGCGCCCCGGCGGTGTGTATGAGGCTCCCGCGGGCATCGAAGCCGGGCGCATGTTCGGTGTCCTC GGCTTCGAGTCCAAGGAGTGCCTCGACGAGAAGAAGCGGGACATCGTCTACCCCCGCCGCATCAACCCGCTCACCACGGG GCCCGGCCTGCCGCGCTTCATTGACGGCAGCCGCACGCTGAAGGCGGGCGGCAACTTCCCCTACGTCGCCGAGCGCCGGG GCGTGTCCTTCATCGAGCGCAGTCTCAAGTCGGGCCTGCAATTCGCCCGGCACCGCAACAACACGGAAGGGCTGCGCGCC CAGGTGCGGCGCTCCATCGCCACCTTCCTCCTCGCGCAGATGAAGAACGGGGCCTTCCGCAGCCAGGAGCCCGCCAAGGC CTACTTCGTCGACGTCTCGGACGCCCTCAACCCGCCGTCCGTCGTCTTCGCCGGAAAGCTGGTGGCGCGCATCGGGCTCG CCACCAACAAACCGGCCGAATTCATCGTCCTGCGCATCGCCCAGGACACCCGCGCCCTCGAAGCCGAGCTGGCTTCGGCG GGCCTGTGA
Upstream 100 bases:
>100_bases GCCAGCCGTGCACAACGCCATGGTGCGCTACTGCGAGGTGGCGAGAAACGGATTGGTGTTCGCCATTCTCGACTCGCCCG CGGGCTACAGGGCGGCGGAC
Downstream 100 bases:
>100_bases GGAGCACCCCATGGCCATCATCGGACAGCCGCGCAGCTTCCATAAGCGTTTCAAGTTCCTCTGTGAGGCTGACGGCCTCG GGCACTCAGGTTTTCAAAAA
Product: putative phage tail sheath protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein Gp; Phage Tail Sheath Family Protein; Phage Tail Sheath Protein FI-Like Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Phage Tail Sheath Protein Fi-Like; Phage SPO1 DNA Polymerase-Related Protein; Phage Tail Sheath Protein Fi-Like Protein; Bacteriophage Tail Sheath Protein; Phage Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVSYVSQEAALEGLSEHAALYWPRVKVLNPARGVFGNVEQLVVPPSGIIAGVFARNDAARPGGVYEAPAGIEAGRMFGVL GFESKECLDEKKRDIVYPRRINPLTTGPGLPRFIDGSRTLKAGGNFPYVAERRGVSFIERSLKSGLQFARHRNNTEGLRA QVRRSIATFLLAQMKNGAFRSQEPAKAYFVDVSDALNPPSVVFAGKLVARIGLATNKPAEFIVLRIAQDTRALEAELASA GL
Sequences:
>Translated_242_residues MVSYVSQEAALEGLSEHAALYWPRVKVLNPARGVFGNVEQLVVPPSGIIAGVFARNDAARPGGVYEAPAGIEAGRMFGVL GFESKECLDEKKRDIVYPRRINPLTTGPGLPRFIDGSRTLKAGGNFPYVAERRGVSFIERSLKSGLQFARHRNNTEGLRA QVRRSIATFLLAQMKNGAFRSQEPAKAYFVDVSDALNPPSVVFAGKLVARIGLATNKPAEFIVLRIAQDTRALEAELASA GL >Mature_242_residues MVSYVSQEAALEGLSEHAALYWPRVKVLNPARGVFGNVEQLVVPPSGIIAGVFARNDAARPGGVYEAPAGIEAGRMFGVL GFESKECLDEKKRDIVYPRRINPLTTGPGLPRFIDGSRTLKAGGNFPYVAERRGVSFIERSLKSGLQFARHRNNTEGLRA QVRRSIATFLLAQMKNGAFRSQEPAKAYFVDVSDALNPPSVVFAGKLVARIGLATNKPAEFIVLRIAQDTRALEAELASA GL
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26210; Mature: 26210
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSYVSQEAALEGLSEHAALYWPRVKVLNPARGVFGNVEQLVVPPSGIIAGVFARNDAAR CCCCHHHHHHHHHHHHHHHEECCCEEEECCCHHHHCCCCEEEECCCCCEEEEEECCCCCC PGGVYEAPAGIEAGRMFGVLGFESKECLDEKKRDIVYPRRINPLTTGPGLPRFIDGSRTL CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCEE KAGGNFPYVAERRGVSFIERSLKSGLQFARHRNNTEGLRAQVRRSIATFLLAQMKNGAFR ECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC SQEPAKAYFVDVSDALNPPSVVFAGKLVARIGLATNKPAEFIVLRIAQDTRALEAELASA CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHC GL CC >Mature Secondary Structure MVSYVSQEAALEGLSEHAALYWPRVKVLNPARGVFGNVEQLVVPPSGIIAGVFARNDAAR CCCCHHHHHHHHHHHHHHHEECCCEEEECCCHHHHCCCCEEEECCCCCEEEEEECCCCCC PGGVYEAPAGIEAGRMFGVLGFESKECLDEKKRDIVYPRRINPLTTGPGLPRFIDGSRTL CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCEE KAGGNFPYVAERRGVSFIERSLKSGLQFARHRNNTEGLRAQVRRSIATFLLAQMKNGAFR ECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC SQEPAKAYFVDVSDALNPPSVVFAGKLVARIGLATNKPAEFIVLRIAQDTRALEAELASA CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHC GL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA