| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761447
Identifier: 108761447
GI number: 108761447
Start: 2176220
End: 2177755
Strand: Reverse
Name: 108761447
Synonym: MXAN_1853
Alternate gene names: NA
Gene position: 2177755-2176220 (Counterclockwise)
Preceding gene: 108757214
Following gene: 108761142
Centisome position: 23.83
GC content: 71.16
Gene sequence:
>1536_bases GTGAGTCGTGCGCTGCTGTCGTCGAAAATCGTGGTTGAGGAGGAGGAGCCGCGCGTCCGCGGCATTCCCTCCGCGCCCAC CTCCGTGGCGGGTGCCGTGGGCCTGGCGGAGCGCGGCCCCATCGGCCAGGCCGTGCTGTGCACTTCCTTCGAGGAGTACC AGGCCACCTTCGGAGGCTTCACCCCGGACTCGGACCTCGCCCTCGCCGCCATGGGCTTCTTCGAGCAGGGCGGCAGCCAC CTCTGGGCGGTGCGCACCGTCCACTACGAGGACGTCTCCAACCCCGAGTCGCACACGGCCACGCGTGCGGCGGCGGCCCT CACCACGGGCGGCGGGCCCACGCCCGCTGTCGTGCGTGGCACCCTGCGGCCCCCCTTCACCCTGGCCGACGGCCAGCGCC TGGAGGTGTCCGTCAACGGCGCCGAAGCGGTGGACGTCATCTTCTCCGGCGCAGCGGCTTCCGTCTCTGCGGGGCGCCCT GGGCCCTATGCCCTCACCGCCGGCCAGGCGCTCCGCGTGCGCGTCGACGCCGGGCGGGACGTCTTCATCCCATTCCTCGA GGAGTCCTTCGGCGACATCGCCCAGGCCACCGCCCAGGAGGTCGCCGCCGTCCTCAACGCCGGACTCGTTGGGGGTCGCG CCCTCGTTGAGGACGGTGTGCTGAGAATCGCCAGCGACACCCAAGGCGCCGCCAGCCGCCTGGAGGTGGACGACGAGGTG GCTGGCGACGTCTTCGGCTTCCCCGGCGGCCCGCAGGTGGGCAGCGGCAACGTCCAGAGTCTGCGCGCCGTCGAGTTGGC GGAGGTGCGTGCTCTCGTCGAGGCAGCGGTGGCGGGCGTCCGCGTGGCACCCTCTTCTCTTGGGACGCTGCAGGTGCGCA CCCAGTCCACGGGCCCTGGCGCGTCCTTGCGTGTACAGGGAGACGCGGGCCCCGGCCTCGGACTGGACGCGCTGCTGCAC ACGGGCGACGCATCCGGTGCCATCGACGTCCTCCATCTGGAGGCCAAGGATGCGGGCGCTTACGCCAACCGCATCGAGGT GGAGGTGCGCCCCGCGACGGCTGGCGCGCCCGACACCTTTGACGTCCTCGTCCTTGAGGACGGCGCCTACCGCGAGTCCT TCCCCAACCTCTCCTCGGCCGAGGACGACGCGCGCTACGCCGAGCGCGTCCTCAATGACGAGCGCACCGGGAGCAGCTAC GTCCGGGCCTTCATGGTGCAACCCGGCGCCCTCCCTGACGAGCAGACGGTGGCACTCACAGGCGGCACCGACGGCCTCGT CGGCCTCAACGACACGGACTTCATCGGCTCGGAGGCCGGCGGGAGCGGTCTTTTACGCGCTCGACGAAGTGCAGGACCTC ACGCTTCTCCTGGTCCCCGGCCGGGCCACGCCAGCCGTGCACAACGCCATGGTGCGCTACTGCGAGGTGGCGAGAAACGG ATTGGTGTTCGCCATTCTCGACTCGCCCGCGGGCTACAGGGCGGCGGACATGGTTTCCTACGTCTCGCAGGAGGCGGCTC TCGAAGGCCTCTCTGA
Upstream 100 bases:
>100_bases CGCTGAAGCGGCAAGCCCCCTCCACCCCGCCGTCCTCTCCATCCCTCCTCCCCGCGTCGGAAGCGTCCGCGCGCGTGTCC CGGAAGAAGCGAGGTGCCTC
Downstream 100 bases:
>100_bases GCACGCGGCCCTCTACTGGCCCCGCGTGAAGGTGCTCAACCCCGCCCGCGGCGTCTTCGGCAACGTGGAGCAGCTCGTCG TCCCGCCCTCTGGAATCATC
Product: heme-binding protein
Products: NA
Alternate protein names: Phage Tail Sheath Family Protein; Phage Tail Sheath Protein FI-Like Protein
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSRALLSSKIVVEEEEPRVRGIPSAPTSVAGAVGLAERGPIGQAVLCTSFEEYQATFGGFTPDSDLALAAMGFFEQGGSH LWAVRTVHYEDVSNPESHTATRAAAALTTGGGPTPAVVRGTLRPPFTLADGQRLEVSVNGAEAVDVIFSGAAASVSAGRP GPYALTAGQALRVRVDAGRDVFIPFLEESFGDIAQATAQEVAAVLNAGLVGGRALVEDGVLRIASDTQGAASRLEVDDEV AGDVFGFPGGPQVGSGNVQSLRAVELAEVRALVEAAVAGVRVAPSSLGTLQVRTQSTGPGASLRVQGDAGPGLGLDALLH TGDASGAIDVLHLEAKDAGAYANRIEVEVRPATAGAPDTFDVLVLEDGAYRESFPNLSSAEDDARYAERVLNDERTGSSY VRAFMVQPGALPDEQTVALTGGTDGLVGLNDTDFIGSEAGGSGLLRARRSAGPHASPGPRPGHASRAQRHGALLRGGEKR IGVRHSRLARGLQGGGHGFLRLAGGGSRRPL
Sequences:
>Translated_511_residues MSRALLSSKIVVEEEEPRVRGIPSAPTSVAGAVGLAERGPIGQAVLCTSFEEYQATFGGFTPDSDLALAAMGFFEQGGSH LWAVRTVHYEDVSNPESHTATRAAAALTTGGGPTPAVVRGTLRPPFTLADGQRLEVSVNGAEAVDVIFSGAAASVSAGRP GPYALTAGQALRVRVDAGRDVFIPFLEESFGDIAQATAQEVAAVLNAGLVGGRALVEDGVLRIASDTQGAASRLEVDDEV AGDVFGFPGGPQVGSGNVQSLRAVELAEVRALVEAAVAGVRVAPSSLGTLQVRTQSTGPGASLRVQGDAGPGLGLDALLH TGDASGAIDVLHLEAKDAGAYANRIEVEVRPATAGAPDTFDVLVLEDGAYRESFPNLSSAEDDARYAERVLNDERTGSSY VRAFMVQPGALPDEQTVALTGGTDGLVGLNDTDFIGSEAGGSGLLRARRSAGPHASPGPRPGHASRAQRHGALLRGGEKR IGVRHSRLARGLQGGGHGFLRLAGGGSRRPL >Mature_510_residues SRALLSSKIVVEEEEPRVRGIPSAPTSVAGAVGLAERGPIGQAVLCTSFEEYQATFGGFTPDSDLALAAMGFFEQGGSHL WAVRTVHYEDVSNPESHTATRAAAALTTGGGPTPAVVRGTLRPPFTLADGQRLEVSVNGAEAVDVIFSGAAASVSAGRPG PYALTAGQALRVRVDAGRDVFIPFLEESFGDIAQATAQEVAAVLNAGLVGGRALVEDGVLRIASDTQGAASRLEVDDEVA GDVFGFPGGPQVGSGNVQSLRAVELAEVRALVEAAVAGVRVAPSSLGTLQVRTQSTGPGASLRVQGDAGPGLGLDALLHT GDASGAIDVLHLEAKDAGAYANRIEVEVRPATAGAPDTFDVLVLEDGAYRESFPNLSSAEDDARYAERVLNDERTGSSYV RAFMVQPGALPDEQTVALTGGTDGLVGLNDTDFIGSEAGGSGLLRARRSAGPHASPGPRPGHASRAQRHGALLRGGEKRI GVRHSRLARGLQGGGHGFLRLAGGGSRRPL
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52335; Mature: 52204
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRALLSSKIVVEEEEPRVRGIPSAPTSVAGAVGLAERGPIGQAVLCTSFEEYQATFGGF CCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCC TPDSDLALAAMGFFEQGGSHLWAVRTVHYEDVSNPESHTATRAAAALTTGGGPTPAVVRG CCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCEEEE TLRPPFTLADGQRLEVSVNGAEAVDVIFSGAAASVSAGRPGPYALTAGQALRVRVDAGRD CCCCCEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEECCCE VFIPFLEESFGDIAQATAQEVAAVLNAGLVGGRALVEDGVLRIASDTQGAASRLEVDDEV EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCCCCHHHCCCCHHH AGDVFGFPGGPQVGSGNVQSLRAVELAEVRALVEAAVAGVRVAPSSLGTLQVRTQSTGPG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEECCCCCC ASLRVQGDAGPGLGLDALLHTGDASGAIDVLHLEAKDAGAYANRIEVEVRPATAGAPDTF CEEEEECCCCCCCCHHHHEECCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCE DVLVLEDGAYRESFPNLSSAEDDARYAERVLNDERTGSSYVRAFMVQPGALPDEQTVALT EEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCCEEEEE GGTDGLVGLNDTDFIGSEAGGSGLLRARRSAGPHASPGPRPGHASRAQRHGALLRGGEKR CCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHCCCCHH IGVRHSRLARGLQGGGHGFLRLAGGGSRRPL CCCHHHHHHHHCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure SRALLSSKIVVEEEEPRVRGIPSAPTSVAGAVGLAERGPIGQAVLCTSFEEYQATFGGF CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCC TPDSDLALAAMGFFEQGGSHLWAVRTVHYEDVSNPESHTATRAAAALTTGGGPTPAVVRG CCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCEEEE TLRPPFTLADGQRLEVSVNGAEAVDVIFSGAAASVSAGRPGPYALTAGQALRVRVDAGRD CCCCCEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEECCCE VFIPFLEESFGDIAQATAQEVAAVLNAGLVGGRALVEDGVLRIASDTQGAASRLEVDDEV EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCCCCHHHCCCCHHH AGDVFGFPGGPQVGSGNVQSLRAVELAEVRALVEAAVAGVRVAPSSLGTLQVRTQSTGPG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEECCCCCC ASLRVQGDAGPGLGLDALLHTGDASGAIDVLHLEAKDAGAYANRIEVEVRPATAGAPDTF CEEEEECCCCCCCCHHHHEECCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCE DVLVLEDGAYRESFPNLSSAEDDARYAERVLNDERTGSSYVRAFMVQPGALPDEQTVALT EEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCCEEEEE GGTDGLVGLNDTDFIGSEAGGSGLLRARRSAGPHASPGPRPGHASRAQRHGALLRGGEKR CCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHCCCCHH IGVRHSRLARGLQGGGHGFLRLAGGGSRRPL CCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA