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The map label for this gene is rutD [H]

Identifier: 108760920

GI number: 108760920

Start: 3929225

End: 3930166

Strand: Reverse

Name: rutD [H]

Synonym: MXAN_3380

Alternate gene names: 108760920

Gene position: 3930166-3929225 (Counterclockwise)

Preceding gene: 108757675

Following gene: 108762513

Centisome position: 43.0

GC content: 69.43

Gene sequence:

>942_bases
ATGAGCCCTGGTCCGCGGTACTTCCACCAGGATCGCCTGCGCGTCCCGGATGGCGCGCAGTTGTATTACCAGGTCCAGGG
AGATGGCCTTCCGGGCATGGTCTTCTGTGACGGCCTGGGCTGTGACGGCTTCGCCTGGAAGTACCTGGCGCCCTACCTGG
TCCGGAACCACCGCGTGCTGCGCTGGCACTACCGGGGCCACGGCCGCTCCACCGTCCCCGAGGACCGCTCTCGCATCGGC
ATGCTGTACACCTGCGATGACCTGCGGCGGATGCTCGACGCCGTGGGGATGGAGCGCGTCGTCCTCTTCGGCCACTCCAT
GGGCGTCCAGGTGGCGCTGGAGTTCCAGCGCCGCTACGCCCAGCGCGTGTGTGGGCTCGTCCTGGTGTGCGGCAGCTACG
GCAACCCGCTGGACACCTTCCACGACTCCACCGCGCTCAAGCGGGCATTCCCGCTCATCCGCCGCGTGGTGGAGCGCTAC
CCCGAGCAGTCCGCCCGCATCATCCACACGGTGCTGCGCACGGAGCTGGCCGTGCAGTTGGCCATCACCCTGGAGATGAA
CCGGGAGCGCATCGCCCGCAACGACCTGGCCCCCTACTTCGACCACCTGGCCCGGATGGACCCCGTCGTCTTCGTGCGCA
CCCTGGAGTCCATGGCGGAGCACAACGCGTGGGACCACCTGCCTCATGTGGACGTCCCCACGCTGGTGGTGGCGGGCGGC
CAGGACAAGTTCACGCCGGGTTGGATCTCCGAGGAAATGGCCGACCGGATCCCCGGCGCCGAGCTGGAGCTCATCCCCGA
AGGCACCCACACCACCCCACTCGAAGCCCCCGGGCGGGTGGAGGCCCGCGTCGAGCGCTTCCTCCGGGAGCGACTGAACG
TGCGTACCGGCGCCCCCTCACCCACGCCTACACCGGTGGTGAGCCCTCCCGCTGGCCCCTGA

Upstream 100 bases:

>100_bases
CGCGAGAGCTGGGCATCAGCCGCTCCAACCTCATCTTGAAGATCTCGCGCTACGGCCTGGACAAGGGCCTGCCCGAGGAC
GAGTCGGAGATGGGCGACGC

Downstream 100 bases:

>100_bases
GCCCTCCGGAAGGGGCCGGCCCCCTGGCGTTGTTCATGGATGACAGGAGTGAAAACCCGCCCGCACGGACGCTGGGCTTC
CGGCTGCATTGCAGGGGACG

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSPGPRYFHQDRLRVPDGAQLYYQVQGDGLPGMVFCDGLGCDGFAWKYLAPYLVRNHRVLRWHYRGHGRSTVPEDRSRIG
MLYTCDDLRRMLDAVGMERVVLFGHSMGVQVALEFQRRYAQRVCGLVLVCGSYGNPLDTFHDSTALKRAFPLIRRVVERY
PEQSARIIHTVLRTELAVQLAITLEMNRERIARNDLAPYFDHLARMDPVVFVRTLESMAEHNAWDHLPHVDVPTLVVAGG
QDKFTPGWISEEMADRIPGAELELIPEGTHTTPLEAPGRVEARVERFLRERLNVRTGAPSPTPTPVVSPPAGP

Sequences:

>Translated_313_residues
MSPGPRYFHQDRLRVPDGAQLYYQVQGDGLPGMVFCDGLGCDGFAWKYLAPYLVRNHRVLRWHYRGHGRSTVPEDRSRIG
MLYTCDDLRRMLDAVGMERVVLFGHSMGVQVALEFQRRYAQRVCGLVLVCGSYGNPLDTFHDSTALKRAFPLIRRVVERY
PEQSARIIHTVLRTELAVQLAITLEMNRERIARNDLAPYFDHLARMDPVVFVRTLESMAEHNAWDHLPHVDVPTLVVAGG
QDKFTPGWISEEMADRIPGAELELIPEGTHTTPLEAPGRVEARVERFLRERLNVRTGAPSPTPTPVVSPPAGP
>Mature_312_residues
SPGPRYFHQDRLRVPDGAQLYYQVQGDGLPGMVFCDGLGCDGFAWKYLAPYLVRNHRVLRWHYRGHGRSTVPEDRSRIGM
LYTCDDLRRMLDAVGMERVVLFGHSMGVQVALEFQRRYAQRVCGLVLVCGSYGNPLDTFHDSTALKRAFPLIRRVVERYP
EQSARIIHTVLRTELAVQLAITLEMNRERIARNDLAPYFDHLARMDPVVFVRTLESMAEHNAWDHLPHVDVPTLVVAGGQ
DKFTPGWISEEMADRIPGAELELIPEGTHTTPLEAPGRVEARVERFLRERLNVRTGAPSPTPTPVVSPPAGP

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 35401; Mature: 35270

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGPRYFHQDRLRVPDGAQLYYQVQGDGLPGMVFCDGLGCDGFAWKYLAPYLVRNHRVL
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEE
RWHYRGHGRSTVPEDRSRIGMLYTCDDLRRMLDAVGMERVVLFGHSMGVQVALEFQRRYA
EEEEECCCCCCCCCHHHHEEEEEEHHHHHHHHHHHCHHEEEEEECCCCHHHHHHHHHHHH
QRVCGLVLVCGSYGNPLDTFHDSTALKRAFPLIRRVVERYPEQSARIIHTVLRTELAVQL
HHHHHHEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE
AITLEMNRERIARNDLAPYFDHLARMDPVVFVRTLESMAEHNAWDHLPHVDVPTLVVAGG
EEEEECCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
QDKFTPGWISEEMADRIPGAELELIPEGTHTTPLEAPGRVEARVERFLRERLNVRTGAPS
CCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PTPTPVVSPPAGP
CCCCCCCCCCCCC
>Mature Secondary Structure 
SPGPRYFHQDRLRVPDGAQLYYQVQGDGLPGMVFCDGLGCDGFAWKYLAPYLVRNHRVL
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEE
RWHYRGHGRSTVPEDRSRIGMLYTCDDLRRMLDAVGMERVVLFGHSMGVQVALEFQRRYA
EEEEECCCCCCCCCHHHHEEEEEEHHHHHHHHHHHCHHEEEEEECCCCHHHHHHHHHHHH
QRVCGLVLVCGSYGNPLDTFHDSTALKRAFPLIRRVVERYPEQSARIIHTVLRTELAVQL
HHHHHHEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE
AITLEMNRERIARNDLAPYFDHLARMDPVVFVRTLESMAEHNAWDHLPHVDVPTLVVAGG
EEEEECCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
QDKFTPGWISEEMADRIPGAELELIPEGTHTTPLEAPGRVEARVERFLRERLNVRTGAPS
CCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PTPTPVVSPPAGP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA