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The map label for this gene is ycgE [C]

Identifier: 108760736

GI number: 108760736

Start: 1027892

End: 1028758

Strand: Direct

Name: ycgE [C]

Synonym: MXAN_0903

Alternate gene names: 108760736

Gene position: 1027892-1028758 (Clockwise)

Preceding gene: 108761991

Following gene: 108759885

Centisome position: 11.25

GC content: 71.16

Gene sequence:

>867_bases
ATGACGTTGCGCATCCGCACCATCGCGCGCATGACGGGCATCCGCGAGGCGACGCTGCGCGCCTGGGAGCGGCGCTACGG
TTTCCCGCGTCCGCTGCGCAGCGAAGGCAACAACTACCGCGTCTATTCGCGCGAGGAGGTGGAGGCCGTCCGCCGTGTGG
CCCGGCTCATCCAGGAGGAAGGCCTGTCGGTGAGCGAGGCCATCGCCCAGGTGAAGACGGAGCCGCCGCGTGAGCAGCCC
GAAGCCGAGCGCCTGCGCGAGCGCTTCTGGTCCTCCGTGGGGGCCCTGGAAGGGGACGAGGTGACGCGCGTGCTGGATGA
CGCACAGACCGTCATGGACGTGGAGGCCTACTGTGACGGCTTCCTGCTGCCCCTGCTGCGGGAGATGGGCGTGCGGCTGG
ACGTCGCGCGGGAGCACCTGGCCTCCGCCCTCATCCGCCAGCGCCTGCGGCAGGTGTATGACGCACTGTCCCCCGCGCCT
GCCGGCCCCCGTGCGCTGCTCGCCTGTCCGTCAGGGGACCACCATGAAGGCGGCCTGCTGGTGCTGGGCATCCACCTCAA
GCGCAAGGGGTGGCGGGTGACGATGCTGGGCGCGGACACCCCGGCGGCGGCGCTGCAGGGGGCTTGCGTGCAGGTTCGGC
CGGACGTGGTGGCGCTGTCCTTCGTGCGCGCCCGTGCGCCGGAGGAGTTCGCGTCCGTCCTGGAAGACGCGCTCCGGGCC
TGCGCGCCCTTTCCCGTGGTCGTCGGCGGGCTGGGGGCTCGCGAGCACCTGAAGGCCATTTTCTCGCTCGGCGCGCAGTA
CGCGGAGTCATCGGAAGAGCTGGTGGCCATCTGGAACCAGGTGCGCAACGCTCAGAATCGCCCGTAG

Upstream 100 bases:

>100_bases
GGCGACTGGCGGCGGTGACGTCCATGGAGGGCTTCACGCGCAGGGTGTCCGGTGCGCGAGGCGTGGCGGAGCGCTGGGAC
GCGGCCCGGGGGCTGGCGTC

Downstream 100 bases:

>100_bases
TCTTGCCGTAGCGACATGGCTGAGCGCACCTATCGAATCAACATCGCCGCGGAGTTGGCAGGAGTCCGGGTGGAGCTCAT
CCGGGCCTGGGAGCGCCGCT

Product: transcriptional repressor CarA

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; MerR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Merr Family; MerR Family Regulatory Protein; Transcriptional Repressor CarA; Transcriptional Regulator CarH; Transcriptional Regulator Marr Family; Cobalamin

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTLRIRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEEGLSVSEAIAQVKTEPPREQP
EAERLRERFWSSVGALEGDEVTRVLDDAQTVMDVEAYCDGFLLPLLREMGVRLDVAREHLASALIRQRLRQVYDALSPAP
AGPRALLACPSGDHHEGGLLVLGIHLKRKGWRVTMLGADTPAAALQGACVQVRPDVVALSFVRARAPEEFASVLEDALRA
CAPFPVVVGGLGAREHLKAIFSLGAQYAESSEELVAIWNQVRNAQNRP

Sequences:

>Translated_288_residues
MTLRIRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEEGLSVSEAIAQVKTEPPREQP
EAERLRERFWSSVGALEGDEVTRVLDDAQTVMDVEAYCDGFLLPLLREMGVRLDVAREHLASALIRQRLRQVYDALSPAP
AGPRALLACPSGDHHEGGLLVLGIHLKRKGWRVTMLGADTPAAALQGACVQVRPDVVALSFVRARAPEEFASVLEDALRA
CAPFPVVVGGLGAREHLKAIFSLGAQYAESSEELVAIWNQVRNAQNRP
>Mature_287_residues
TLRIRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEEGLSVSEAIAQVKTEPPREQPE
AERLRERFWSSVGALEGDEVTRVLDDAQTVMDVEAYCDGFLLPLLREMGVRLDVAREHLASALIRQRLRQVYDALSPAPA
GPRALLACPSGDHHEGGLLVLGIHLKRKGWRVTMLGADTPAAALQGACVQVRPDVVALSFVRARAPEEFASVLEDALRAC
APFPVVVGGLGAREHLKAIFSLGAQYAESSEELVAIWNQVRNAQNRP

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32008; Mature: 31877

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRIRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEE
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEECHHHHHHHHHHHHHHHHC
GLSVSEAIAQVKTEPPREQPEAERLRERFWSSVGALEGDEVTRVLDDAQTVMDVEAYCDG
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCH
FLLPLLREMGVRLDVAREHLASALIRQRLRQVYDALSPAPAGPRALLACPSGDHHEGGLL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEE
VLGIHLKRKGWRVTMLGADTPAAALQGACVQVRPDVVALSFVRARAPEEFASVLEDALRA
EEEEEEECCCCEEEEEECCCCHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHH
CAPFPVVVGGLGAREHLKAIFSLGAQYAESSEELVAIWNQVRNAQNRP
HCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLRIRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEE
EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEECHHHHHHHHHHHHHHHHC
GLSVSEAIAQVKTEPPREQPEAERLRERFWSSVGALEGDEVTRVLDDAQTVMDVEAYCDG
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCH
FLLPLLREMGVRLDVAREHLASALIRQRLRQVYDALSPAPAGPRALLACPSGDHHEGGLL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEE
VLGIHLKRKGWRVTMLGADTPAAALQGACVQVRPDVVALSFVRARAPEEFASVLEDALRA
EEEEEEECCCCEEEEEECCCCHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHH
CAPFPVVVGGLGAREHLKAIFSLGAQYAESSEELVAIWNQVRNAQNRP
HCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA