Click here to switch to the map view.

The map label for this gene is carH [C]

Identifier: 108759885

GI number: 108759885

Start: 1028774

End: 1029673

Strand: Direct

Name: carH [C]

Synonym: MXAN_0904

Alternate gene names: 108759885

Gene position: 1028774-1029673 (Clockwise)

Preceding gene: 108760736

Following gene: 108761492

Centisome position: 11.26

GC content: 72.33

Gene sequence:

>900_bases
ATGGCTGAGCGCACCTATCGAATCAACATCGCCGCGGAGTTGGCAGGAGTCCGGGTGGAGCTCATCCGGGCCTGGGAGCG
CCGCTACGGCGTGCTCACGCCGCGCCGCACCCCCGCGGGCTACCGCGCCTATACGGACCGGGACGTGGCGGTGCTCAAGC
AGCTCAAGCGGTTGACCGACGAAGGCGTGGCCATCAGCGAAGCGGCGAAGCTGCTGCCTCAGTTGATGGAGGGGCTGGAG
GCGGAAGTCGCGGGGCGGGGTGCCAGCCAGGACGCGCGGCCGCATGCGGAGACGTGGCGGGAGTCCATGCTCGCCGCCAC
CCAGGCGTATGACCAGCCGCGCGTGTCGGACGTGCTCGACGAGGTGTTGGCCGCGCTGCCCCCGCTCAAGGCCTTCGATG
AGGTGCTGGCGCCCCTTCTCTGCGACGTGGGCGAGCGCTGGGAGTCGGGCACGCTGACAGTGGCGCAGGAGCACCTGGTG
TCGCAGATGGTGCGGGCGCGGCTGGTGAGCCTGCTGCACGCGGCGCCCCTGGGGCGGCACCGGCATGGTGTCCTGGCGTG
CTTTCCGGAAGAGGAGCACGAGATGGGCCTGCTGGGAGCGGCGCTGCGGCTGCGGCACCTGGGCGTGCGGGTGACGCTGC
TGGGGCAGCGCGTTCCCGCGGAGGACCTGGGCCGCGCGGTATTGGCGCTGCGGCCCGACTTCGTGGGGCTGTCCACGGTG
GCCAGCCGGAGCGCAGAGGACTTCGAGGACACCCTGACGCGTTTGAGGCAGGCGCTGCCCAGGGGGCTGCCCGTCTGGGT
GGGCGGCGCCGCCGCGCGCTCGCACCAGGCCGTGTGCGAGCGGTTGGCGGTGCACGTCTTCCAGGGCGAGGAGGACTGGG
ACCGCCTCGCGGGTACGTGA

Upstream 100 bases:

>100_bases
CTCGCTCGGCGCGCAGTACGCGGAGTCATCGGAAGAGCTGGTGGCCATCTGGAACCAGGTGCGCAACGCTCAGAATCGCC
CGTAGTCTTGCCGTAGCGAC

Downstream 100 bases:

>100_bases
GTCAGGGCGTGTTGATGGCGGAGTGATTGAAGACGCGGCTGCCGTAGTACTGGGCGGCCTCCTCTGCGTTGTCGCAAATC
TCCGCGCACTTGCCCGGGGC

Product: transcriptional regulator CarH

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Regulatory Protein MerR; Transcriptional Regulator Merr Family; Transcriptional Regulator; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; Transcriptional Repressor CarA; Transcriptional Regulator CarH; MarR Family Transcriptional Regulator; Transcriptional Regulator Marr Family; Cobalamin

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAERTYRINIAAELAGVRVELIRAWERRYGVLTPRRTPAGYRAYTDRDVAVLKQLKRLTDEGVAISEAAKLLPQLMEGLE
AEVAGRGASQDARPHAETWRESMLAATQAYDQPRVSDVLDEVLAALPPLKAFDEVLAPLLCDVGERWESGTLTVAQEHLV
SQMVRARLVSLLHAAPLGRHRHGVLACFPEEEHEMGLLGAALRLRHLGVRVTLLGQRVPAEDLGRAVLALRPDFVGLSTV
ASRSAEDFEDTLTRLRQALPRGLPVWVGGAAARSHQAVCERLAVHVFQGEEDWDRLAGT

Sequences:

>Translated_299_residues
MAERTYRINIAAELAGVRVELIRAWERRYGVLTPRRTPAGYRAYTDRDVAVLKQLKRLTDEGVAISEAAKLLPQLMEGLE
AEVAGRGASQDARPHAETWRESMLAATQAYDQPRVSDVLDEVLAALPPLKAFDEVLAPLLCDVGERWESGTLTVAQEHLV
SQMVRARLVSLLHAAPLGRHRHGVLACFPEEEHEMGLLGAALRLRHLGVRVTLLGQRVPAEDLGRAVLALRPDFVGLSTV
ASRSAEDFEDTLTRLRQALPRGLPVWVGGAAARSHQAVCERLAVHVFQGEEDWDRLAGT
>Mature_298_residues
AERTYRINIAAELAGVRVELIRAWERRYGVLTPRRTPAGYRAYTDRDVAVLKQLKRLTDEGVAISEAAKLLPQLMEGLEA
EVAGRGASQDARPHAETWRESMLAATQAYDQPRVSDVLDEVLAALPPLKAFDEVLAPLLCDVGERWESGTLTVAQEHLVS
QMVRARLVSLLHAAPLGRHRHGVLACFPEEEHEMGLLGAALRLRHLGVRVTLLGQRVPAEDLGRAVLALRPDFVGLSTVA
SRSAEDFEDTLTRLRQALPRGLPVWVGGAAARSHQAVCERLAVHVFQGEEDWDRLAGT

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32929; Mature: 32798

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERTYRINIAAELAGVRVELIRAWERRYGVLTPRRTPAGYRAYTDRDVAVLKQLKRLTD
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EGVAISEAAKLLPQLMEGLEAEVAGRGASQDARPHAETWRESMLAATQAYDQPRVSDVLD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
EVLAALPPLKAFDEVLAPLLCDVGERWESGTLTVAQEHLVSQMVRARLVSLLHAAPLGRH
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RHGVLACFPEEEHEMGLLGAALRLRHLGVRVTLLGQRVPAEDLGRAVLALRPDFVGLSTV
CCCEEEECCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHCCHHHHHCCCHHHHHHH
ASRSAEDFEDTLTRLRQALPRGLPVWVGGAAARSHQAVCERLAVHVFQGEEDWDRLAGT
HHCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure 
AERTYRINIAAELAGVRVELIRAWERRYGVLTPRRTPAGYRAYTDRDVAVLKQLKRLTD
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
EGVAISEAAKLLPQLMEGLEAEVAGRGASQDARPHAETWRESMLAATQAYDQPRVSDVLD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
EVLAALPPLKAFDEVLAPLLCDVGERWESGTLTVAQEHLVSQMVRARLVSLLHAAPLGRH
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RHGVLACFPEEEHEMGLLGAALRLRHLGVRVTLLGQRVPAEDLGRAVLALRPDFVGLSTV
CCCEEEECCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHCCHHHHHCCCHHHHHHH
ASRSAEDFEDTLTRLRQALPRGLPVWVGGAAARSHQAVCERLAVHVFQGEEDWDRLAGT
HHCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA