Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108760713

Identifier: 108760713

GI number: 108760713

Start: 5814791

End: 5816260

Strand: Reverse

Name: 108760713

Synonym: MXAN_4634

Alternate gene names: NA

Gene position: 5816260-5814791 (Counterclockwise)

Preceding gene: 108761800

Following gene: 108757628

Centisome position: 63.64

GC content: 71.16

Gene sequence:

>1470_bases
GTGCGGGCGCGTGGGCTTTTCAGGGGTGCCACCATGGACGCCGAGCACAGGGTTGATGGACAGGATGGGACGGCGGGTGC
TGGGCCCGAAGGTGGCTCGCAGGCGCCGTCCGGGCAGGACGGCGGCCAGGGCGGTGCCGTGAGCGCCGAGCTGCACGCTT
CGGGGGGCCCCTCGGGGCCGCAGGGCGAGCACAGGCGCGAGGACGCGTCACCGGAGTCCGGTGGTGAGCACCGAGCCGAG
GGCACGCCCCCCGCCGAAGGTTCAGAACAGCGAGCTGAGGGCACGCCTGCCGCCGAAGGTTCGGAGCAGCGAGCCGAGGG
CAAGCCTTCCGAGCAGGGCGTTGCGCAGCGCGCCGAGGACACGCCTTCGGAACAAGGCGAGCCCCAGAACGCCGGCTCTG
CACAGGGGCAGGGCGGTGAGCCTCCTGTCGCCAGTGGCGACACTCAGGGTGAGGGCGAACGGCCGCACAACGCGGGCGGG
GAAGCGCCGGGCTCCGCGGACGCCTCCGGAAGCGAAGGTTCGAAGGACCAGGCAGGTTCGCAGGAAGGTGGACTGCAGGC
CGAGGGCACCACGTCCCAGGGGCAGGCAGAGCCACCTGCCAAGGATGCGTCTCATGCGCAGGGCGAGCACCAGGCCGTGA
GTGATTCCCACGGGCAGGACGGAAGCGAATCGGGAGGCAGGTCCGTCGCCAACGAGGAGGCGCGCGCCGAGCAGTCCCCC
TCCGACGGCGAGGCCCGTGTCACGCCCGGGCTGGACGAGCGCCCGCAAGGCGCGTTCTGGACGGGGGAGGCCGACGGGGA
CAAATCCGGCGACTCTGACGAGGCGTCGCGGGAGGACGTCCTCCCCGAACCCGAGCAGCGGCTTTCGGGCCGGGTGACGA
CGGTGCTCCTGCCGCTGGAGAAGCTGCAGGACGAAAGCGCGTTCAAGCTTCGCCCGGAAGGCGACGTGTCGGGGCTGGCC
ACGGACATCGCGCGGCTGGGGCAGTTGTTCCCGGTGGACGTCCGCCCGGCGGGGGAAGACCGCTACCAACTCGTCTGTGG
CTTCCGGCGGGTCGCTGCGCTGCGCTTCCTCAAGCGGGACGCCGTGCAGGCGCGGATCCACTTGCGGCTCTCGGACGAGG
ACGCGCTGGTGATGTCGCTGGCGGAGGCGATTCACGCCACGCCGGTGGGCCCGGAAGTCCTGGAGGCGAAGCGCGACGAG
CTCGAGGCGCAGGGGCGCTTGAGCGCGGCCGTGCGCGACATGCTGGAGAAGGCGCTCGCCACTGAGGACACACTGGCGCC
GGAGGGCGTCGAAGAGGAGATTGACGCCGACGAGCTGGCGCAGGAAGTGGCGCAGCGGCTTGGGGCCATCAATCAAGACC
TCTCGCTGCTGGCGGACGTGTTCGCCGCGCTGGATGAGTCGCGCAAGGCGGAGCTCCTGATGCAGCTCCGCTACTCGTCC
GAGCTGGTCACCTATCTGGAGGGGCTGTAA

Upstream 100 bases:

>100_bases
CCGCCAACGCCAGTCCTGGTGGGTGCTGGCGCGAAGAAGAAGGTCGTGGTGAAGAAGAAGACCCGCTAGCGCGCACCGCC
CGCGCCGCCAGTCGTTGGCG

Downstream 100 bases:

>100_bases
GCCATGGCGGAACCTCTCGTGCGCGACCGTGCCCGGCTGTTGGAGCTGCTCACCGAGCGCTCCTTCGAGCAGCGCCGCGT
GGTGCTCTCGTCCGGCAAGG

Product: ParB-like nuclease domain-containing protein

Products: NA

Alternate protein names: Nuclease; ParB-Like Nuclease Domain-Containing Protein; Parb-Like Nuclease Domain Protein

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGPQGEHRREDASPESGGEHRAE
GTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAEDTPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGG
EAPGSADASGSEGSKDQAGSQEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP
SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLEKLQDESAFKLRPEGDVSGLA
TDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRDAVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDE
LEAQGRLSAAVRDMLEKALATEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS
ELVTYLEGL

Sequences:

>Translated_489_residues
MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGPQGEHRREDASPESGGEHRAE
GTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAEDTPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGG
EAPGSADASGSEGSKDQAGSQEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP
SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLEKLQDESAFKLRPEGDVSGLA
TDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRDAVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDE
LEAQGRLSAAVRDMLEKALATEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS
ELVTYLEGL
>Mature_489_residues
MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGPQGEHRREDASPESGGEHRAE
GTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAEDTPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGG
EAPGSADASGSEGSKDQAGSQEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP
SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLEKLQDESAFKLRPEGDVSGLA
TDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRDAVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDE
LEAQGRLSAAVRDMLEKALATEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS
ELVTYLEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50811; Mature: 50811

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGP
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
QGEHRREDASPESGGEHRAEGTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHC
TPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGGEAPGSADASGSEGSKDQAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC
SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLE
CCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCEEEEEEEHH
KLQDESAFKLRPEGDVSGLATDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRD
HHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDELEAQGRLSAAVRDMLEKALA
HHEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS
HHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ELVTYLEGL
HHHHHHHCC
>Mature Secondary Structure
MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGP
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
QGEHRREDASPESGGEHRAEGTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHC
TPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGGEAPGSADASGSEGSKDQAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC
SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLE
CCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCEEEEEEEHH
KLQDESAFKLRPEGDVSGLATDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRD
HHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDELEAQGRLSAAVRDMLEKALA
HHEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS
HHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ELVTYLEGL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA