| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pyrE [H]
Identifier: 108757628
GI number: 108757628
Start: 5814221
End: 5814787
Strand: Reverse
Name: pyrE [H]
Synonym: MXAN_4633
Alternate gene names: 108757628
Gene position: 5814787-5814221 (Counterclockwise)
Preceding gene: 108760713
Following gene: 108762327
Centisome position: 63.62
GC content: 70.02
Gene sequence:
>567_bases ATGGCGGAACCTCTCGTGCGCGACCGTGCCCGGCTGTTGGAGCTGCTCACCGAGCGCTCCTTCGAGCAGCGCCGCGTGGT GCTCTCGTCCGGCAAGGAGTCGGACTTCTACATCGACTGCAAGCGCACGGCGCTGCTGGCCGAGGGCCACTTTCTCATTG GCCGGCTGTTCCTGGATGCCATCCGGCGCGAGGCCCCGGAGGCCGTGGGCGTGGGCGGACTGACGCTGGGTGCCGACCCG CTGGCGTCCGCGGTGAGCCTCACTGGCTACCTGTCCGGCACGCCGCTGGCGGCCTTCATCGTGCGCAAGGAGCCCAAGGG GCACGGCACGGGGCAGTGGATTGAAGGCCTGAGCGGGCTGGGGCAGGGCGCGGCGGTGGCCATCGTGGAGGACGTCGTCA CGACGGGAGCCTCCACGCTGAAGGCCATCGAGCGGGCCCAGTTGGAGGGCCTGAAGGTGCTGGGCGCCTTCGCGCTGGTG GACCGGTTGGAGGGTGGGCGTGAAGCCGTGGAGGCCTCGGGTCACCGGCTCCACACGCTCTTCACCCGCAAGGACTTCAT TCCGTGA
Upstream 100 bases:
>100_bases GGACGTGTTCGCCGCGCTGGATGAGTCGCGCAAGGCGGAGCTCCTGATGCAGCTCCGCTACTCGTCCGAGCTGGTCACCT ATCTGGAGGGGCTGTAAGCC
Downstream 100 bases:
>100_bases GGCGTCCGTTTCTCACCGCGGCGCTGCTGGGGCTGCTCGCGGGCTGTGTCACCACGCCGCCCACCGCCATCAGTGATCCG CCGCCGTCGCTGCCGGACGA
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAEPLVRDRARLLELLTERSFEQRRVVLSSGKESDFYIDCKRTALLAEGHFLIGRLFLDAIRREAPEAVGVGGLTLGADP LASAVSLTGYLSGTPLAAFIVRKEPKGHGTGQWIEGLSGLGQGAAVAIVEDVVTTGASTLKAIERAQLEGLKVLGAFALV DRLEGGREAVEASGHRLHTLFTRKDFIP
Sequences:
>Translated_188_residues MAEPLVRDRARLLELLTERSFEQRRVVLSSGKESDFYIDCKRTALLAEGHFLIGRLFLDAIRREAPEAVGVGGLTLGADP LASAVSLTGYLSGTPLAAFIVRKEPKGHGTGQWIEGLSGLGQGAAVAIVEDVVTTGASTLKAIERAQLEGLKVLGAFALV DRLEGGREAVEASGHRLHTLFTRKDFIP >Mature_187_residues AEPLVRDRARLLELLTERSFEQRRVVLSSGKESDFYIDCKRTALLAEGHFLIGRLFLDAIRREAPEAVGVGGLTLGADPL ASAVSLTGYLSGTPLAAFIVRKEPKGHGTGQWIEGLSGLGQGAAVAIVEDVVTTGASTLKAIERAQLEGLKVLGAFALVD RLEGGREAVEASGHRLHTLFTRKDFIP
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=168, Percent_Identity=34.5238095238095, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17554964, Length=177, Percent_Identity=34.4632768361582, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI17933654, Length=174, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 20119; Mature: 19988
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPLVRDRARLLELLTERSFEQRRVVLSSGKESDFYIDCKRTALLAEGHFLIGRLFLDA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECHHEEHHCCHHHHHHHHHHH IRREAPEAVGVGGLTLGADPLASAVSLTGYLSGTPLAAFIVRKEPKGHGTGQWIEGLSGL HHHHCCHHHCCCCEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCC GQGAAVAIVEDVVTTGASTLKAIERAQLEGLKVLGAFALVDRLEGGREAVEASGHRLHTL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEE FTRKDFIP HHHHCCCC >Mature Secondary Structure AEPLVRDRARLLELLTERSFEQRRVVLSSGKESDFYIDCKRTALLAEGHFLIGRLFLDA CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECHHEEHHCCHHHHHHHHHHH IRREAPEAVGVGGLTLGADPLASAVSLTGYLSGTPLAAFIVRKEPKGHGTGQWIEGLSGL HHHHCCHHHCCCCEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCC GQGAAVAIVEDVVTTGASTLKAIERAQLEGLKVLGAFALVDRLEGGREAVEASGHRLHTL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEE FTRKDFIP HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA