| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yigI [C]
Identifier: 108760700
GI number: 108760700
Start: 80456
End: 80920
Strand: Reverse
Name: yigI [C]
Synonym: MXAN_0072
Alternate gene names: 108760700
Gene position: 80920-80456 (Counterclockwise)
Preceding gene: 108758229
Following gene: 108757115
Centisome position: 0.89
GC content: 67.1
Gene sequence:
>465_bases ATGACGACCATGTCCGAGTCCACGACGCCTCCCCTCGCCGAGTTGGTGCGCCAGGTACGCAAGACGCGCGAGTACAAGCG CCTCACCGACGCCATCCCCTACACGCGTTTCATGGGCATCGGCGTGGAGAACCTCGCCGGCGAGATGCTCTGCCGCATGG CCTTCAACCCGAGGAACATCGGCAACAGCCTGATTCCCGCCCTTCACGGCGGCACGCTCGGCGCGCTGCTGGAATCCGCC GCCGTCTTCGAGCTGCTGCTGCAGACGAACACCGAGCGCGTGCCGAAGGTCATCTCGCTCACGGTGGACTTCCTTCGCTC CGGCAAGCCGCAGGACACCTTCGCCAAGGCGTTCGTCACCCGCCAGGGCCGACGCGTGGCCAACGTCCGGGTGGATGCGT GGCAGGACGACCGCACGCGGCCCATCGCCAGCGCGCACGCGTTGTTCCTGCTGTCAGAGCCGTAA
Upstream 100 bases:
>100_bases GGCTCACCCGCCAGGTGGCCTTCGTCCGCGCGTTCGTCCACCAGGGCGACCCGGGCCACCCCGTGGCTTCCGCCCAGGGC ACCTTCATGCGGACAGAGGA
Downstream 100 bases:
>100_bases GCCTTCCGGGAGTGGAGCCGCTGACGGCGGGATGCCCTCGAAACCCCGGAGGCACTGAGACAGGAGCCCTCGCCCCGCTG CCCGCCCCCCTTGCTCCGCG
Product: thioesterase family protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTTMSESTTPPLAELVRQVRKTREYKRLTDAIPYTRFMGIGVENLAGEMLCRMAFNPRNIGNSLIPALHGGTLGALLESA AVFELLLQTNTERVPKVISLTVDFLRSGKPQDTFAKAFVTRQGRRVANVRVDAWQDDRTRPIASAHALFLLSEP
Sequences:
>Translated_154_residues MTTMSESTTPPLAELVRQVRKTREYKRLTDAIPYTRFMGIGVENLAGEMLCRMAFNPRNIGNSLIPALHGGTLGALLESA AVFELLLQTNTERVPKVISLTVDFLRSGKPQDTFAKAFVTRQGRRVANVRVDAWQDDRTRPIASAHALFLLSEP >Mature_153_residues TTMSESTTPPLAELVRQVRKTREYKRLTDAIPYTRFMGIGVENLAGEMLCRMAFNPRNIGNSLIPALHGGTLGALLESAA VFELLLQTNTERVPKVISLTVDFLRSGKPQDTFAKAFVTRQGRRVANVRVDAWQDDRTRPIASAHALFLLSEP
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17128; Mature: 16997
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMSESTTPPLAELVRQVRKTREYKRLTDAIPYTRFMGIGVENLAGEMLCRMAFNPRNI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCC GNSLIPALHGGTLGALLESAAVFELLLQTNTERVPKVISLTVDFLRSGKPQDTFAKAFVT CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RQGRRVANVRVDAWQDDRTRPIASAHALFLLSEP HCCCEEEEEEEECCCCCCCCCHHHHHEEEEEECC >Mature Secondary Structure TTMSESTTPPLAELVRQVRKTREYKRLTDAIPYTRFMGIGVENLAGEMLCRMAFNPRNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCC GNSLIPALHGGTLGALLESAAVFELLLQTNTERVPKVISLTVDFLRSGKPQDTFAKAFVT CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RQGRRVANVRVDAWQDDRTRPIASAHALFLLSEP HCCCEEEEEEEECCCCCCCCCHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA