| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yigI [C]
Identifier: 108758229
GI number: 108758229
Start: 80917
End: 81369
Strand: Reverse
Name: yigI [C]
Synonym: MXAN_0073
Alternate gene names: 108758229
Gene position: 81369-80917 (Counterclockwise)
Preceding gene: 108760307
Following gene: 108760700
Centisome position: 0.89
GC content: 69.76
Gene sequence:
>453_bases ATGTCGGACGACTTCACGCTTCCTGAAGACAAGGCCGAGCGGATGGAGCGCTGCGCGATCTTCTACACCGACGTCGTGCC CCACAATCACGCGCTGGGGCTGCGGCTGGTGGACATCCGCGCCGCCGAGGCCACCGTCGAGCTGCCCTACGCGGAGAACC TCGTCGGAAACCCGGAAACCGGCGTCATCGCCGGCGGCGCGGTGACGACGCTCATCGACGCCACCTGCGGCACCGCCGTT TTCCTCAGGCTGGGCCGCTTCGCCCCGCTCGTCACGCTGGACCTGCGCATCGACTACCTGCGCCCCGCGCGGCCCGGCAT CGTTCTCACCTGCGTGGCCGAGTGCTACCGGCTCACCCGCCAGGTGGCCTTCGTCCGCGCGTTCGTCCACCAGGGCGACC CGGGCCACCCCGTGGCTTCCGCCCAGGGCACCTTCATGCGGACAGAGGAATGA
Upstream 100 bases:
>100_bases AGCTCTCCAGCGCCGCGGCCGTGGCCTCCTAGCGTGGCGTTGCGGGCCCCCGTCAAAACACAGTGCGCCAGGCGGCCCTG AATCTGGTATCGCGCCCCTC
Downstream 100 bases:
>100_bases CGACCATGTCCGAGTCCACGACGCCTCCCCTCGCCGAGTTGGTGCGCCAGGTACGCAAGACGCGCGAGTACAAGCGCCTC ACCGACGCCATCCCCTACAC
Product: thioesterase family protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDDFTLPEDKAERMERCAIFYTDVVPHNHALGLRLVDIRAAEATVELPYAENLVGNPETGVIAGGAVTTLIDATCGTAV FLRLGRFAPLVTLDLRIDYLRPARPGIVLTCVAECYRLTRQVAFVRAFVHQGDPGHPVASAQGTFMRTEE
Sequences:
>Translated_150_residues MSDDFTLPEDKAERMERCAIFYTDVVPHNHALGLRLVDIRAAEATVELPYAENLVGNPETGVIAGGAVTTLIDATCGTAV FLRLGRFAPLVTLDLRIDYLRPARPGIVLTCVAECYRLTRQVAFVRAFVHQGDPGHPVASAQGTFMRTEE >Mature_149_residues SDDFTLPEDKAERMERCAIFYTDVVPHNHALGLRLVDIRAAEATVELPYAENLVGNPETGVIAGGAVTTLIDATCGTAVF LRLGRFAPLVTLDLRIDYLRPARPGIVLTCVAECYRLTRQVAFVRAFVHQGDPGHPVASAQGTFMRTEE
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16401; Mature: 16270
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDFTLPEDKAERMERCAIFYTDVVPHNHALGLRLVDIRAAEATVELPYAENLVGNPET CCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEECCEEEECCCHHCCCCCCCC GVIAGGAVTTLIDATCGTAVFLRLGRFAPLVTLDLRIDYLRPARPGIVLTCVAECYRLTR CEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHH QVAFVRAFVHQGDPGHPVASAQGTFMRTEE HHHHHHHHHHCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure SDDFTLPEDKAERMERCAIFYTDVVPHNHALGLRLVDIRAAEATVELPYAENLVGNPET CCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEECCEEEECCCHHCCCCCCCC GVIAGGAVTTLIDATCGTAVFLRLGRFAPLVTLDLRIDYLRPARPGIVLTCVAECYRLTR CEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHH QVAFVRAFVHQGDPGHPVASAQGTFMRTEE HHHHHHHHHHCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA