| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760588
Identifier: 108760588
GI number: 108760588
Start: 5920745
End: 5921308
Strand: Reverse
Name: 108760588
Synonym: MXAN_4727
Alternate gene names: NA
Gene position: 5921308-5920745 (Counterclockwise)
Preceding gene: 108759426
Following gene: 108758832
Centisome position: 64.79
GC content: 64.54
Gene sequence:
>564_bases TTGCTGAACATGTCGCTTCGCACCACCATCGCGGCCACGGCCGCCGCTCTGTCGCTCGCCCTCCCGGTGGCCGCCTCGGC CGCCGAGCTGAAGGTCGCCTACGTGGACCTCCAGAAAGTCATGCTGGAGGTGGATGACGGAAAGGCCGCCAAGTCCCGTC TCCAGAAGTGGCTCGACGACCGCCAGAAGGAAATCGACAAGGAGCAGAACGCGCTCCGCGCCGAGAAGGAGACGCTCGAC AAGCAGGCCAGCGCCATGAGCGCGGAGAGCAAGGCCCAGAAGGAGGCCGAGCTCCAGCGCAAGGTGATGTTGCTCGCCCA GAAGTGGGAGAAGAGCCGCGCCGAGGCCGCCAACAAGGAGCAGCAGGAGATGAAGCCGATCATCGACAAGATCGACTCCA TCATCAACACCATCGCCGAGCGCGATGACCTGGGCTTCGTCCTCGAGCGCCGCGACTCCGGCATCGTCTACGCCCGCTCG CAGCACGACATCTCCAACGAGGTCATCCGGGCGTACAACAGCTCGAAGAAGACGGCGGCGAAGGACGCCCCGACGAAGAA GTAG
Upstream 100 bases:
>100_bases GATAAGCCCTTGGCCCGTCGTCCGGCGTCCGCGCCCACGGGCGGAGGGAATTGAAGATGCCCGATAGGCGTACGTCGGAG CTTGTACCCTTCCTGAGGAG
Downstream 100 bases:
>100_bases CCGTCACTCCCAACTCGTGCAGACCGCTCCCATGCCCCGCCAGCTCGGGGAACTCGCCGCCCACGTGGGTGGAGAGCTCC TCGGTGACCCCTCACAGCTC
Product: OmpH family outer membrane protein
Products: NA
Alternate protein names: OmpH Family Outer Membrane Protein; Outer Membrane Protein Omph Family
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLNMSLRTTIAATAAALSLALPVAASAAELKVAYVDLQKVMLEVDDGKAAKSRLQKWLDDRQKEIDKEQNALRAEKETLD KQASAMSAESKAQKEAELQRKVMLLAQKWEKSRAEAANKEQQEMKPIIDKIDSIINTIAERDDLGFVLERRDSGIVYARS QHDISNEVIRAYNSSKKTAAKDAPTKK
Sequences:
>Translated_187_residues MLNMSLRTTIAATAAALSLALPVAASAAELKVAYVDLQKVMLEVDDGKAAKSRLQKWLDDRQKEIDKEQNALRAEKETLD KQASAMSAESKAQKEAELQRKVMLLAQKWEKSRAEAANKEQQEMKPIIDKIDSIINTIAERDDLGFVLERRDSGIVYARS QHDISNEVIRAYNSSKKTAAKDAPTKK >Mature_187_residues MLNMSLRTTIAATAAALSLALPVAASAAELKVAYVDLQKVMLEVDDGKAAKSRLQKWLDDRQKEIDKEQNALRAEKETLD KQASAMSAESKAQKEAELQRKVMLLAQKWEKSRAEAANKEQQEMKPIIDKIDSIINTIAERDDLGFVLERRDSGIVYARS QHDISNEVIRAYNSSKKTAAKDAPTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20843; Mature: 20843
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNMSLRTTIAATAAALSLALPVAASAAELKVAYVDLQKVMLEVDDGKAAKSRLQKWLDD CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RQKEIDKEQNALRAEKETLDKQASAMSAESKAQKEAELQRKVMLLAQKWEKSRAEAANKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QQEMKPIIDKIDSIINTIAERDDLGFVLERRDSGIVYARSQHDISNEVIRAYNSSKKTAA HHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCHHHHHHHHHHCCCHHHHC KDAPTKK CCCCCCC >Mature Secondary Structure MLNMSLRTTIAATAAALSLALPVAASAAELKVAYVDLQKVMLEVDDGKAAKSRLQKWLDD CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RQKEIDKEQNALRAEKETLDKQASAMSAESKAQKEAELQRKVMLLAQKWEKSRAEAANKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QQEMKPIIDKIDSIINTIAERDDLGFVLERRDSGIVYARSQHDISNEVIRAYNSSKKTAA HHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCHHHHHHHHHHCCCHHHHC KDAPTKK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA