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The map label for this gene is ccsA [H]

Identifier: 108760340

GI number: 108760340

Start: 3096191

End: 3097006

Strand: Direct

Name: ccsA [H]

Synonym: MXAN_2654

Alternate gene names: 108760340

Gene position: 3096191-3097006 (Clockwise)

Preceding gene: 108761623

Following gene: 108763498

Centisome position: 33.88

GC content: 71.08

Gene sequence:

>816_bases
ATGAGCCACACGCTCGTCTCGCTCGCCTGCCACGCGTATGGCATCGCCGCTGTCGTCTACCTGGCCTACCTGGTCCGCCA
GTCCGAGGCCCTGGCCACGGCCGGGCGCGTGCTGGTGGGCGGTGGATTGGCGCTGCATGGCGTGGCGCTCTTCGAGTTGC
TCGGGGTGCAGAGCGGGCGGCCGGTGGGCCTGGCGCAAGGCTTCTCCGCGCTGGCCTTCCTGCTGCTGGCCATCTTCCTG
TTCCTGGACGTGCGCTACCGCCGGCCCGTCATCGGCGCCTTCCTCACGCCGCTGGCGCTGGCCGCGTTGCTGCCCGGTCT
GCTGTTGCAGGGCGGGCAGGCGCCGCTGCCTCCCGGGGTGCGTCAGCCGCTGTTGCCGCTGCACATCACCCTGGCGCTGA
TGGGGCTGGCCGCGTTCGCGGTCGCCGCGGGAGTGGGCGTCATGTACGTGCTCATGGAGCGGCAGGTGAAGGCGAAGCGC
TTCGGTTTGCTGTTCTCCCGCCTGCCCTCCCTGGAGTTCCTGGACACGCTGAACCGGCGCCTGGTGGTGTGGGGCTTCCT
GGCGCTGTCCATCACGCTCGCCACGGGGGCCTTCTTCGTGGGCACCGCGCCGGGCCCCTGGACCGTGGATGGGAAGACGC
TGGCCACCCTCGTTGCGTGGGCGGTCTTCGCCGCGCTGCTGGTGGCGCGTTCCGTCGCGGGCTGGCGGGGGCGGCGGGTG
GCCTTCCTCACCATGGCGGGGTTCTGCCTGGTCATGGTGTCCTTCCTGTCCTCGTATGACGTGTCGTCGCCCTCGGCGGC
CATGAGGATGCCCTGA

Upstream 100 bases:

>100_bases
GCGGACAAGAAACCGGACTCTGAAGCAGACCTTCTGGCTGCCTTCATCCTCAACAAGATGGGCTGATTCGCCCGTCTTCC
GTGGTTATGAGCCTGCCCCT

Downstream 100 bases:

>100_bases
GTATGGAGCTCATTTGCATTGGCCTGTCCCACCGGACGGCGCCCCTCACCGTCCGCGAGCGACTGGCCTTGCCGGAGTCG
CGTCAGGTGGACGTGCTCCA

Product: cytochrome C assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSHTLVSLACHAYGIAAVVYLAYLVRQSEALATAGRVLVGGGLALHGVALFELLGVQSGRPVGLAQGFSALAFLLLAIFL
FLDVRYRRPVIGAFLTPLALAALLPGLLLQGGQAPLPPGVRQPLLPLHITLALMGLAAFAVAAGVGVMYVLMERQVKAKR
FGLLFSRLPSLEFLDTLNRRLVVWGFLALSITLATGAFFVGTAPGPWTVDGKTLATLVAWAVFAALLVARSVAGWRGRRV
AFLTMAGFCLVMVSFLSSYDVSSPSAAMRMP

Sequences:

>Translated_271_residues
MSHTLVSLACHAYGIAAVVYLAYLVRQSEALATAGRVLVGGGLALHGVALFELLGVQSGRPVGLAQGFSALAFLLLAIFL
FLDVRYRRPVIGAFLTPLALAALLPGLLLQGGQAPLPPGVRQPLLPLHITLALMGLAAFAVAAGVGVMYVLMERQVKAKR
FGLLFSRLPSLEFLDTLNRRLVVWGFLALSITLATGAFFVGTAPGPWTVDGKTLATLVAWAVFAALLVARSVAGWRGRRV
AFLTMAGFCLVMVSFLSSYDVSSPSAAMRMP
>Mature_270_residues
SHTLVSLACHAYGIAAVVYLAYLVRQSEALATAGRVLVGGGLALHGVALFELLGVQSGRPVGLAQGFSALAFLLLAIFLF
LDVRYRRPVIGAFLTPLALAALLPGLLLQGGQAPLPPGVRQPLLPLHITLALMGLAAFAVAAGVGVMYVLMERQVKAKRF
GLLFSRLPSLEFLDTLNRRLVVWGFLALSITLATGAFFVGTAPGPWTVDGKTLATLVAWAVFAALLVARSVAGWRGRRVA
FLTMAGFCLVMVSFLSSYDVSSPSAAMRMP

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28622; Mature: 28491

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTLVSLACHAYGIAAVVYLAYLVRQSEALATAGRVLVGGGLALHGVALFELLGVQSGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCC
PVGLAQGFSALAFLLLAIFLFLDVRYRRPVIGAFLTPLALAALLPGLLLQGGQAPLPPGV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RQPLLPLHITLALMGLAAFAVAAGVGVMYVLMERQVKAKRFGLLFSRLPSLEFLDTLNRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LVVWGFLALSITLATGAFFVGTAPGPWTVDGKTLATLVAWAVFAALLVARSVAGWRGRRV
HHHHHHHHHHHHHHHCCEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
AFLTMAGFCLVMVSFLSSYDVSSPSAAMRMP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SHTLVSLACHAYGIAAVVYLAYLVRQSEALATAGRVLVGGGLALHGVALFELLGVQSGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCC
PVGLAQGFSALAFLLLAIFLFLDVRYRRPVIGAFLTPLALAALLPGLLLQGGQAPLPPGV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RQPLLPLHITLALMGLAAFAVAAGVGVMYVLMERQVKAKRFGLLFSRLPSLEFLDTLNRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LVVWGFLALSITLATGAFFVGTAPGPWTVDGKTLATLVAWAVFAALLVARSVAGWRGRRV
HHHHHHHHHHHHHHHCCEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
AFLTMAGFCLVMVSFLSSYDVSSPSAAMRMP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA