| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hemA
Identifier: 108763498
GI number: 108763498
Start: 3097009
End: 3098334
Strand: Direct
Name: hemA
Synonym: MXAN_2655
Alternate gene names: 108763498
Gene position: 3097009-3098334 (Clockwise)
Preceding gene: 108760340
Following gene: 108761567
Centisome position: 33.89
GC content: 71.95
Gene sequence:
>1326_bases ATGGAGCTCATTTGCATTGGCCTGTCCCACCGGACGGCGCCCCTCACCGTCCGCGAGCGACTGGCCTTGCCGGAGTCGCG TCAGGTGGACGTGCTCCAGCGGCTGGCCCAGGCGCCCGTGGAGGCCCTCTGGGTGTCCACCTGCAACCGCGTGGAGGTGT ACCTGTTCGCGCCGGACGCGGCGATGGCGCGGCAGCGCGCCTTGATGGAGCTGCAGGTGCTGGGCGGGGTGGAAGCCCTG GAGCACCTCTACGAGCACCAGGGCGAGGCGGCGCTGGTGCACCTGTTCCGCGTGGCGTGCAGCCTGGACTCCATGGTGCT GGGCGAGGCTCAGATTCTGGGCCAGGTGAAGGAAGCCTTCGAGCGGGGCCAGGGCGCGGGCGCGGTGCGTGGTGAGTTGA TGCGCGCGTGCGCGGCGGCCTTCAGCTGCGCCAAGCGCGTGCGCACGGAGACGGCCATTGGCCGCGCGGCCACGTCCATG GCGGCGGCGGCGGTGCAACTGGCCAGCAAGGTGTTCGATGGGCTCGCGGGCAAGACGGTGCTGGTGGTGGGCGCGGGGGA GATGGGCGAGCTGGCGGCGCGCCACTTGAAGCAGGCTGGTGCGTCGAAGCTCTACGTCACCAACCGCACCCTGTCGCGAG CGGAGGCGCTGGCGGCGGAGGTGGGCGGACAGGCGAGGCCCTTCGAGGAGCTGCTCGGTCTGGTGGCCGCGGCGGACGTG GTGGTGTGCAGCACGGCGTCGCAGGCGCCGCTCTTCACGCGGGACAACGTGGGCGCCCTGGGGCGCGGACGCCGGGGGCG GCCGCTGTTCATGGTGGACCTGGCGGTGCCTCGCGACATCGATCCGGCGGTGGGCACGCTGGACTGGGTACATGCATACG ACGTGGACGACATCCAGAAGTTCGTCGCGGACAACGCCGCGGCGCGCGCGGAAGAGGCGCAGAAGGCGGGCGTGCTCGTC GCGCAGGAAGTAGCGCGTTTCGTCAAGGAGCGTGCGCTGCGTGAGGGCACGCCGGTGCTGGCGCGACTGCGTCAGCGCGC GGAAGCCATTGCCCGCTCCGAGGTGGAGCGCACGCTGGGCGCCCTGGGCGACGGACTCAACGAAAAGCAACGCAAGAGCA TCGAGGCCATGGGCCGAGCCATCGTCAACAAGCTGCTGCATGAGCCCACCGCGCGGCTGCGCGCCGTGGGGCCGGAAGGG GAGGGCAACCGCCTGGCGGGTGCCGCCGCCGAGCTGTTCGGTCTCCTGGAGGAGGAGGTCGGCACCGCCGCCGCCGCGCC CTCCGTCATGGCCGCGCCAGTCCAGGTCGCCACGGGGGGCAAGTGA
Upstream 100 bases:
>100_bases TGGCCTTCCTCACCATGGCGGGGTTCTGCCTGGTCATGGTGTCCTTCCTGTCCTCGTATGACGTGTCGTCGCCCTCGGCG GCCATGAGGATGCCCTGAGT
Downstream 100 bases:
>100_bases TGACGCACGTGCGTATCGCCACCCGGCAGAGTCCCCTGGCGCTCTGGCAGGCGCGTCACGTGGGCGCGCTGCTGACCTCG CGGCATCCCGGTTTGGAAGT
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MELICIGLSHRTAPLTVRERLALPESRQVDVLQRLAQAPVEALWVSTCNRVEVYLFAPDAAMARQRALMELQVLGGVEAL EHLYEHQGEAALVHLFRVACSLDSMVLGEAQILGQVKEAFERGQGAGAVRGELMRACAAAFSCAKRVRTETAIGRAATSM AAAAVQLASKVFDGLAGKTVLVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQARPFEELLGLVAAADV VVCSTASQAPLFTRDNVGALGRGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQKFVADNAAARAEEAQKAGVLV AQEVARFVKERALREGTPVLARLRQRAEAIARSEVERTLGALGDGLNEKQRKSIEAMGRAIVNKLLHEPTARLRAVGPEG EGNRLAGAAAELFGLLEEEVGTAAAAPSVMAAPVQVATGGK
Sequences:
>Translated_441_residues MELICIGLSHRTAPLTVRERLALPESRQVDVLQRLAQAPVEALWVSTCNRVEVYLFAPDAAMARQRALMELQVLGGVEAL EHLYEHQGEAALVHLFRVACSLDSMVLGEAQILGQVKEAFERGQGAGAVRGELMRACAAAFSCAKRVRTETAIGRAATSM AAAAVQLASKVFDGLAGKTVLVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQARPFEELLGLVAAADV VVCSTASQAPLFTRDNVGALGRGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQKFVADNAAARAEEAQKAGVLV AQEVARFVKERALREGTPVLARLRQRAEAIARSEVERTLGALGDGLNEKQRKSIEAMGRAIVNKLLHEPTARLRAVGPEG EGNRLAGAAAELFGLLEEEVGTAAAAPSVMAAPVQVATGGK >Mature_441_residues MELICIGLSHRTAPLTVRERLALPESRQVDVLQRLAQAPVEALWVSTCNRVEVYLFAPDAAMARQRALMELQVLGGVEAL EHLYEHQGEAALVHLFRVACSLDSMVLGEAQILGQVKEAFERGQGAGAVRGELMRACAAAFSCAKRVRTETAIGRAATSM AAAAVQLASKVFDGLAGKTVLVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQARPFEELLGLVAAADV VVCSTASQAPLFTRDNVGALGRGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQKFVADNAAARAEEAQKAGVLV AQEVARFVKERALREGTPVLARLRQRAEAIARSEVERTLGALGDGLNEKQRKSIEAMGRAIVNKLLHEPTARLRAVGPEG EGNRLAGAAAELFGLLEEEVGTAAAAPSVMAAPVQVATGGK
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=410, Percent_Identity=37.3170731707317, Blast_Score=253, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_MYXXD (Q1D8Z9)
Other databases:
- EMBL: CP000113 - RefSeq: YP_630874.1 - ProteinModelPortal: Q1D8Z9 - SMR: Q1D8Z9 - STRING: Q1D8Z9 - GeneID: 4107254 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_2655 - TIGR: MXAN_2655 - eggNOG: COG0373 - HOGENOM: HBG732626 - OMA: GPILNRL - PhylomeDB: Q1D8Z9 - ProtClustDB: PRK00045 - BioCyc: MXAN246197:MXAN_2655-MONOMER - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 46681; Mature: 46681
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 48-48 BINDING 104-104 BINDING 115-115
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELICIGLSHRTAPLTVRERLALPESRQVDVLQRLAQAPVEALWVSTCNRVEVYLFAPDA CCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHCCCCEEEEEECCCH AMARQRALMELQVLGGVEALEHLYEHQGEAALVHLFRVACSLDSMVLGEAQILGQVKEAF HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERGQGAGAVRGELMRACAAAFSCAKRVRTETAIGRAATSMAAAAVQLASKVFDGLAGKTV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQARPFEELLGLVAAADV EEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVCSTASQAPLFTRDNVGALGRGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQK HEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCHHHHHHCCHHHHHH FVADNAAARAEEAQKAGVLVAQEVARFVKERALREGTPVLARLRQRAEAIARSEVERTLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ALGDGLNEKQRKSIEAMGRAIVNKLLHEPTARLRAVGPEGEGNRLAGAAAELFGLLEEEV HHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH GTAAAAPSVMAAPVQVATGGK CHHHCCCCHHHCCEEECCCCC >Mature Secondary Structure MELICIGLSHRTAPLTVRERLALPESRQVDVLQRLAQAPVEALWVSTCNRVEVYLFAPDA CCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHCCCCEEEEEECCCH AMARQRALMELQVLGGVEALEHLYEHQGEAALVHLFRVACSLDSMVLGEAQILGQVKEAF HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERGQGAGAVRGELMRACAAAFSCAKRVRTETAIGRAATSMAAAAVQLASKVFDGLAGKTV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQARPFEELLGLVAAADV EEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVCSTASQAPLFTRDNVGALGRGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQK HEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCHHHHHHCCHHHHHH FVADNAAARAEEAQKAGVLVAQEVARFVKERALREGTPVLARLRQRAEAIARSEVERTLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ALGDGLNEKQRKSIEAMGRAIVNKLLHEPTARLRAVGPEGEGNRLAGAAAELFGLLEEEV HHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH GTAAAAPSVMAAPVQVATGGK CHHHCCCCHHHCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA