| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108760339
Identifier: 108760339
GI number: 108760339
Start: 4674883
End: 4676535
Strand: Reverse
Name: 108760339
Synonym: MXAN_3889
Alternate gene names: NA
Gene position: 4676535-4674883 (Counterclockwise)
Preceding gene: 108760634
Following gene: 108759490
Centisome position: 51.17
GC content: 63.94
Gene sequence:
>1653_bases GTGGCAGCACACGCGGATGGCGCCCACCCGCGTCGGCGCTGTCCACTGTCTTCCTGGGCGACCAGCCACGGCACGTTCGC CCAGCCGTGCGGACCAGCGCGCCCTTCTCGTCCCATGAAGCAGTGGACCCACGACGCTCCACTGCGCATCGTTTGCACTT GCTGGGAGGTGTTGATGGCAAGGACAGAGAAGGGGCGGAAGGTGGCGCGCGGGGGGACTCCAGCGGGGCGTACCGCTGTG AGGCGTACCAGGAACGGCGCGCTGGGAGAGAGCGAGTCTCAGGGCGTGGACATTCGGAACCTGCCTGCCTGTATTCAGGA CATTGTGCTGGCCGCACAGGATACCGACCCGGGACCGCCGGAGCCCCTCGATTATCACCAACTCCGGGGCCGCATCGAAG CGGCTCGTGTGACACTTCCGCCGCTCTATCGCGACGAGGTCCTGGTTCCCTTTCTCCGCATCCTGGACAAGCTCGGGTCC CAGGGGTTTGCGGAAGTGCTTCTGCGGGACCCCACGCGCGAGCGCGAGGCGGGGCTCGTGATCGACGCTGCGCACACCAT CCTTCAGAACGGGGAGAACTATCAACTCGTCGCGACGGATGCATTTGAGGAGGTCGTGAGCGATCTGTATGACGGGTTCT TGAGCGCGGAGGACCGGCGGAACGTCAAGCCCCCAGATCGGGGAGTCATCCCGCCTCTGGTGAAGTGGGGGAGCCCTCAA TTCGGGCCTTATACGTGGCCGGTGGATGTAACGAGGTCCGTCCTGGGGATGGGCGCTGGTATCGTGAGCCTTCCTCCCGC GCATGCCAGGGTGGGGCTGCTGGCGTGGTCTGCGATCGGTCATGAGGTGGGAGGGCACGACATCCTGCATGCCGATGATG GATTGCCGGAGGAGCTTGCCATTGCTGTGAATGAGCACTTGCAAGCGGGAAAGCTCGCTTCATTGGGTCACTACTGGAGT GAACGCATCGACGAAACAGCGTCCGATGTCCTCGGCATTCTCAACATGGGGCCGGCCGCGGGCATCGGGCTCATTGGCTA CTTTCGAGGGTTGAATCTCGCATTCCGTGGAGAGGGAAGACTGCGTAACGGTGGGCGCGCTTCGGATCCCCATCCCGCGG GTATCCTTCGGGGGTTCCTGGCGGCCTACGTTGTTGCGCGCCTGCGCTTCGACCACGCGGCGGAGTGGTCTCAGGTGATT CTCAATGAGGTGAGAATGGATGTGGTGCCTGAGGAGCTGGTGCTGGCAGGAAAGAAGGTGGACCCCGAGGATGCGCGGAG ATCCGCCGAGCTGGTTGCGGAGGTGATTGTTTCCAGCAAGCTGAACGCTCTTGAAGGGCACTCACTGGGCTCCATCCAGA CCTGGCGCAATAGCGACGAGGAGAAGGTGCAGGAGATGCGGCGCCTTCTTGTGTCCGGCCTTGGGGCTCTTCCTGATGCT GTGACCGAAGGCATCTACGCCGCGCACCTCGTGGCGGCGGGTGTCACCGCCGCGCTGGCCGCGGAGGCGGACGTCCGGCG AATCTTCGACCGAATGATTCGGCTGCTGAAGCAGATGCACGATCGGAACCCGTCCTGGGGGCCGCTCTTCATCCGGCACC GCAGCGACGTTGCGCCGCACTTTCTCTATCCATACCCACGCCATCGGGTGTGA
Upstream 100 bases:
>100_bases CTCGTCTGCGACGCCACCATCTGGAGCTCGGCTTTTGGTGGCCTCACGAGCTTGAACCGATTCTGGCAGAATCTGGCGCG AATGCCCGCGTCATAGGCTG
Downstream 100 bases:
>100_bases TTGAGCACGCAAAGCAAAGTGCCGGAATGTCTGATGCGGTAAGCTGTCTCACCGGGGCATCGTCACTGCCGCCGGTGAGC AGCCTCCACTTCATGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MAAHADGAHPRRRCPLSSWATSHGTFAQPCGPARPSRPMKQWTHDAPLRIVCTCWEVLMARTEKGRKVARGGTPAGRTAV RRTRNGALGESESQGVDIRNLPACIQDIVLAAQDTDPGPPEPLDYHQLRGRIEAARVTLPPLYRDEVLVPFLRILDKLGS QGFAEVLLRDPTREREAGLVIDAAHTILQNGENYQLVATDAFEEVVSDLYDGFLSAEDRRNVKPPDRGVIPPLVKWGSPQ FGPYTWPVDVTRSVLGMGAGIVSLPPAHARVGLLAWSAIGHEVGGHDILHADDGLPEELAIAVNEHLQAGKLASLGHYWS ERIDETASDVLGILNMGPAAGIGLIGYFRGLNLAFRGEGRLRNGGRASDPHPAGILRGFLAAYVVARLRFDHAAEWSQVI LNEVRMDVVPEELVLAGKKVDPEDARRSAELVAEVIVSSKLNALEGHSLGSIQTWRNSDEEKVQEMRRLLVSGLGALPDA VTEGIYAAHLVAAGVTAALAAEADVRRIFDRMIRLLKQMHDRNPSWGPLFIRHRSDVAPHFLYPYPRHRV
Sequences:
>Translated_550_residues MAAHADGAHPRRRCPLSSWATSHGTFAQPCGPARPSRPMKQWTHDAPLRIVCTCWEVLMARTEKGRKVARGGTPAGRTAV RRTRNGALGESESQGVDIRNLPACIQDIVLAAQDTDPGPPEPLDYHQLRGRIEAARVTLPPLYRDEVLVPFLRILDKLGS QGFAEVLLRDPTREREAGLVIDAAHTILQNGENYQLVATDAFEEVVSDLYDGFLSAEDRRNVKPPDRGVIPPLVKWGSPQ FGPYTWPVDVTRSVLGMGAGIVSLPPAHARVGLLAWSAIGHEVGGHDILHADDGLPEELAIAVNEHLQAGKLASLGHYWS ERIDETASDVLGILNMGPAAGIGLIGYFRGLNLAFRGEGRLRNGGRASDPHPAGILRGFLAAYVVARLRFDHAAEWSQVI LNEVRMDVVPEELVLAGKKVDPEDARRSAELVAEVIVSSKLNALEGHSLGSIQTWRNSDEEKVQEMRRLLVSGLGALPDA VTEGIYAAHLVAAGVTAALAAEADVRRIFDRMIRLLKQMHDRNPSWGPLFIRHRSDVAPHFLYPYPRHRV >Mature_549_residues AAHADGAHPRRRCPLSSWATSHGTFAQPCGPARPSRPMKQWTHDAPLRIVCTCWEVLMARTEKGRKVARGGTPAGRTAVR RTRNGALGESESQGVDIRNLPACIQDIVLAAQDTDPGPPEPLDYHQLRGRIEAARVTLPPLYRDEVLVPFLRILDKLGSQ GFAEVLLRDPTREREAGLVIDAAHTILQNGENYQLVATDAFEEVVSDLYDGFLSAEDRRNVKPPDRGVIPPLVKWGSPQF GPYTWPVDVTRSVLGMGAGIVSLPPAHARVGLLAWSAIGHEVGGHDILHADDGLPEELAIAVNEHLQAGKLASLGHYWSE RIDETASDVLGILNMGPAAGIGLIGYFRGLNLAFRGEGRLRNGGRASDPHPAGILRGFLAAYVVARLRFDHAAEWSQVIL NEVRMDVVPEELVLAGKKVDPEDARRSAELVAEVIVSSKLNALEGHSLGSIQTWRNSDEEKVQEMRRLLVSGLGALPDAV TEGIYAAHLVAAGVTAALAAEADVRRIFDRMIRLLKQMHDRNPSWGPLFIRHRSDVAPHFLYPYPRHRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60172; Mature: 60041
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHADGAHPRRRCPLSSWATSHGTFAQPCGPARPSRPMKQWTHDAPLRIVCTCWEVLMA CCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH RTEKGRKVARGGTPAGRTAVRRTRNGALGESESQGVDIRNLPACIQDIVLAAQDTDPGPP HHHCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC EPLDYHQLRGRIEAARVTLPPLYRDEVLVPFLRILDKLGSQGFAEVLLRDPTREREAGLV CCCCHHHHHCHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHCCEE IDAAHTILQNGENYQLVATDAFEEVVSDLYDGFLSAEDRRNVKPPDRGVIPPLVKWGSPQ EHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCC FGPYTWPVDVTRSVLGMGAGIVSLPPAHARVGLLAWSAIGHEVGGHDILHADDGLPEELA CCCCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHH IAVNEHLQAGKLASLGHYWSERIDETASDVLGILNMGPAAGIGLIGYFRGLNLAFRGEGR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCC LRNGGRASDPHPAGILRGFLAAYVVARLRFDHAAEWSQVILNEVRMDVVPEELVLAGKKV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC DPEDARRSAELVAEVIVSSKLNALEGHSLGSIQTWRNSDEEKVQEMRRLLVSGLGALPDA CHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHH VTEGIYAAHLVAAGVTAALAAEADVRRIFDRMIRLLKQMHDRNPSWGPLFIRHRSDVAPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC FLYPYPRHRV CCCCCCCCCC >Mature Secondary Structure AAHADGAHPRRRCPLSSWATSHGTFAQPCGPARPSRPMKQWTHDAPLRIVCTCWEVLMA CCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH RTEKGRKVARGGTPAGRTAVRRTRNGALGESESQGVDIRNLPACIQDIVLAAQDTDPGPP HHHCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC EPLDYHQLRGRIEAARVTLPPLYRDEVLVPFLRILDKLGSQGFAEVLLRDPTREREAGLV CCCCHHHHHCHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHCCEE IDAAHTILQNGENYQLVATDAFEEVVSDLYDGFLSAEDRRNVKPPDRGVIPPLVKWGSPQ EHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCC FGPYTWPVDVTRSVLGMGAGIVSLPPAHARVGLLAWSAIGHEVGGHDILHADDGLPEELA CCCCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHH IAVNEHLQAGKLASLGHYWSERIDETASDVLGILNMGPAAGIGLIGYFRGLNLAFRGEGR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCC LRNGGRASDPHPAGILRGFLAAYVVARLRFDHAAEWSQVILNEVRMDVVPEELVLAGKKV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC DPEDARRSAELVAEVIVSSKLNALEGHSLGSIQTWRNSDEEKVQEMRRLLVSGLGALPDA CHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHH VTEGIYAAHLVAAGVTAALAAEADVRRIFDRMIRLLKQMHDRNPSWGPLFIRHRSDVAPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC FLYPYPRHRV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA