| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759490
Identifier: 108759490
GI number: 108759490
Start: 4673643
End: 4674776
Strand: Reverse
Name: 108759490
Synonym: MXAN_3888
Alternate gene names: NA
Gene position: 4674776-4673643 (Counterclockwise)
Preceding gene: 108760339
Following gene: 108764050
Centisome position: 51.15
GC content: 70.72
Gene sequence:
>1134_bases TTGAGTGATGGCGCCCACTGCTCAATGCAAGCGCAGGGTCCTGTGTCTCGCAGCACACAAACGGCGCCACGCCACTCCCC GCATGGCCGGGGAGTGGCCAAGAGTGGGGCCATGAGGATGCTGCCTGTCTGCATGGGAGTCCTGGTCTGTGGGTGCGCGG CGCACGGCGTGGGGGAGCGGCCAGACGCCGTCACCGCCGCGTCCATGGATGGCCGCGAGGTGCTGCGCTTCGAGGGCATG TGTGACGCCTCCGGCGCGGTGGCGCTCGGCGGCAGCCTGTTCGTCGTGGGCGACGATGAGGACAACATCCTCCGTGTCTA CGACGCGCGCCGGGGCGGTCCACCCGTGCAGAGCGTGGACCTGTCCCCGGACCTGGAGCTGCCCGCGGCGAAGAAGAAGC CCCCGGAGGCGGACATCGAGGCAGCCACCGGGCTGGGCTCGCTGTCCTTCTGGCTGACGTCCCACGGCCGCAAGAGCTCC GGGAAGAAGGCGCCCAGCCGGCTGCGCTTCTTCGCCACCAAGGAGACGGACGCGGGGCCCCGGCTGGTGGGCCGGCCGTA CACGCAACTCCTGGATGACATGCTCGCGGCGCCCCAACTGGCGCGCTTCGGGCTGGACGGGGCGGAGACGAAGGCGCCCA AGGCACCGGGTGGGCTCAACATCGAGGGCATGACGGCCATGGCGGATGGACGCACCATCCTCGTGGGCTTCCGCAGCCCC GTGCCCGACGGGAAGGCGCTGCTGGTGCCGCTGCTCAATCCGGTTGCGTTGGTGGAAGAGGGCGCTCGGGCCCAGTTGGG CGAGCCCGTGCAACTGGACCTGGGCGGCTTGGGCATCCGTTCGCTGTCCTGGTGGCGCGGCCGCTACGTCATCATCAGCG GTGGCACGGCGGGAGAGGGCACCTCGCGGCTGTTCACCTGGCGCGGCGGTGAGGACGCCCCGGTCGCCGTGGAATCGGTG GACCTGGCGGGCCTGAACCCGGAGGCCTTCTTCACGCCGGAGGACACCGAGGAAATCCTGCTGCTCAGCGACGACGGCGC CGCGCCCGTGGACGGCGTTGAGTGCAAGCGGCTGAAGGACCCGTCGCGCAAGCGCTTCCGGGGCGTCTGGGTGCGGCTGC CAGAATCGCCGTGA
Upstream 100 bases:
>100_bases ACGCAAAGCAAAGTGCCGGAATGTCTGATGCGGTAAGCTGTCTCACCGGGGCATCGTCACTGCCGCCGGTGAGCAGCCTC CACTTCATGGTTTCCGCGCA
Downstream 100 bases:
>100_bases GGCGGCGTGTGCGTCCGTCCGCCGCGCTTGGGGTAGGCTGCGCGTCCATATGCAGCTGGCCATTCCGCATGCTCCCCGGC AGGTCCGACTGACGCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSDGAHCSMQAQGPVSRSTQTAPRHSPHGRGVAKSGAMRMLPVCMGVLVCGCAAHGVGERPDAVTAASMDGREVLRFEGM CDASGAVALGGSLFVVGDDEDNILRVYDARRGGPPVQSVDLSPDLELPAAKKKPPEADIEAATGLGSLSFWLTSHGRKSS GKKAPSRLRFFATKETDAGPRLVGRPYTQLLDDMLAAPQLARFGLDGAETKAPKAPGGLNIEGMTAMADGRTILVGFRSP VPDGKALLVPLLNPVALVEEGARAQLGEPVQLDLGGLGIRSLSWWRGRYVIISGGTAGEGTSRLFTWRGGEDAPVAVESV DLAGLNPEAFFTPEDTEEILLLSDDGAAPVDGVECKRLKDPSRKRFRGVWVRLPESP
Sequences:
>Translated_377_residues MSDGAHCSMQAQGPVSRSTQTAPRHSPHGRGVAKSGAMRMLPVCMGVLVCGCAAHGVGERPDAVTAASMDGREVLRFEGM CDASGAVALGGSLFVVGDDEDNILRVYDARRGGPPVQSVDLSPDLELPAAKKKPPEADIEAATGLGSLSFWLTSHGRKSS GKKAPSRLRFFATKETDAGPRLVGRPYTQLLDDMLAAPQLARFGLDGAETKAPKAPGGLNIEGMTAMADGRTILVGFRSP VPDGKALLVPLLNPVALVEEGARAQLGEPVQLDLGGLGIRSLSWWRGRYVIISGGTAGEGTSRLFTWRGGEDAPVAVESV DLAGLNPEAFFTPEDTEEILLLSDDGAAPVDGVECKRLKDPSRKRFRGVWVRLPESP >Mature_376_residues SDGAHCSMQAQGPVSRSTQTAPRHSPHGRGVAKSGAMRMLPVCMGVLVCGCAAHGVGERPDAVTAASMDGREVLRFEGMC DASGAVALGGSLFVVGDDEDNILRVYDARRGGPPVQSVDLSPDLELPAAKKKPPEADIEAATGLGSLSFWLTSHGRKSSG KKAPSRLRFFATKETDAGPRLVGRPYTQLLDDMLAAPQLARFGLDGAETKAPKAPGGLNIEGMTAMADGRTILVGFRSPV PDGKALLVPLLNPVALVEEGARAQLGEPVQLDLGGLGIRSLSWWRGRYVIISGGTAGEGTSRLFTWRGGEDAPVAVESVD LAGLNPEAFFTPEDTEEILLLSDDGAAPVDGVECKRLKDPSRKRFRGVWVRLPESP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39685; Mature: 39553
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGAHCSMQAQGPVSRSTQTAPRHSPHGRGVAKSGAMRMLPVCMGVLVCGCAAHGVGER CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PDAVTAASMDGREVLRFEGMCDASGAVALGGSLFVVGDDEDNILRVYDARRGGPPVQSVD CCCEEEECCCCCEEEEECCCCCCCCCEEECCEEEEEECCCCCEEEEEECCCCCCCCCEEC LSPDLELPAAKKKPPEADIEAATGLGSLSFWLTSHGRKSSGKKAPSRLRFFATKETDAGP CCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC RLVGRPYTQLLDDMLAAPQLARFGLDGAETKAPKAPGGLNIEGMTAMADGRTILVGFRSP CCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCC VPDGKALLVPLLNPVALVEEGARAQLGEPVQLDLGGLGIRSLSWWRGRYVIISGGTAGEG CCCCCEEEEECCCHHHHHHCCCHHHCCCCEEEECCCCCCCCEEEECCEEEEEECCCCCCC TSRLFTWRGGEDAPVAVESVDLAGLNPEAFFTPEDTEEILLLSDDGAAPVDGVECKRLKD CCEEEEECCCCCCCEEEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHCCC PSRKRFRGVWVRLPESP CHHHCCCEEEEECCCCC >Mature Secondary Structure SDGAHCSMQAQGPVSRSTQTAPRHSPHGRGVAKSGAMRMLPVCMGVLVCGCAAHGVGER CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PDAVTAASMDGREVLRFEGMCDASGAVALGGSLFVVGDDEDNILRVYDARRGGPPVQSVD CCCEEEECCCCCEEEEECCCCCCCCCEEECCEEEEEECCCCCEEEEEECCCCCCCCCEEC LSPDLELPAAKKKPPEADIEAATGLGSLSFWLTSHGRKSSGKKAPSRLRFFATKETDAGP CCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC RLVGRPYTQLLDDMLAAPQLARFGLDGAETKAPKAPGGLNIEGMTAMADGRTILVGFRSP CCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCC VPDGKALLVPLLNPVALVEEGARAQLGEPVQLDLGGLGIRSLSWWRGRYVIISGGTAGEG CCCCCEEEEECCCHHHHHHCCCHHHCCCCEEEECCCCCCCCEEEECCEEEEEECCCCCCC TSRLFTWRGGEDAPVAVESVDLAGLNPEAFFTPEDTEEILLLSDDGAAPVDGVECKRLKD CCEEEEECCCCCCCEEEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHCCC PSRKRFRGVWVRLPESP CHHHCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA