| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760284
Identifier: 108760284
GI number: 108760284
Start: 6571520
End: 6572398
Strand: Direct
Name: 108760284
Synonym: MXAN_5271
Alternate gene names: NA
Gene position: 6571520-6572398 (Clockwise)
Preceding gene: 108758494
Following gene: 108760897
Centisome position: 71.9
GC content: 65.76
Gene sequence:
>879_bases ATGAGCGGCGGCACCCTTCGAAGCCCACAGGTTCATGCGCTCGTGAGACTCATCAACGAGGCACATGAGCTGCCAGCGCG AGTGGCGACACGGTCCCGGCATCTCCTCGTCGGGCTGTGTCGCATTCTGGGCGCAGAGGCCGGAGCATGCGTCTTGGAGC GCGACTTCAGACCGGGAGGACATGACGGATTCACGGAGATCGTCCTGGAAGGGTGGAGCGGGAGCGCGGTGTCCGCGCTC GAGGCGCTCCGGAGGATGGGAAGTGCCTGCAACCCCGCCATACGCTCATTGATGGAGCGCGGCTCGGAGCCCGGCACCAT CGTCACCGCGATGCGCCGGGAACTGGTGGAGGACTGGAGCTGGTATGGCGCCCCTTATGTCGAGCATCATCTGCGCCCCA CGGGGCTCGATGACTCGGTGTATTCAAGCCAGTGGTCCGGGCTCCCGGGGGTGGTGCGGGGTATCGGAATCTACCGTGAG CGGGGCGGCCGCCCCTTCGACGCCGCGGACCGAGAGCTGCTGCATCTGTTCCACGCCGAGTGCGGAGCCATGTTCGACCC ACCAGGGTCCTCGAAGGTGGGAACGCCGTCAGGCTGGCTGGCGCCTCGCGAACGACAAACGTTGGAGTTGCTGCTTCAGG GACTCGGAGACAAGCAGATCGCGGCTCGGCTCGGCATCAGTCGTTTCACCGTGAATCAGTACACGAAAACCCTCTACCGC CGCTTCGGAGTCCAGTCGCGGGCGGCGCTCATCGCACAGGTGCTCGCACGCGATGAGCCAGATGCCACGACTGCGCTCCC CTCACGGCAAGTCCCGCCAGATGGACACCCGAAGCTCGCACGTTCATCCGACGGGCAGGACCCGTCCAGGCGCTCTTGA
Upstream 100 bases:
>100_bases TGTGCCGCGAAATGCCGCGCAAACCCTGACCTGAACATGCATTTATTGTAATTCACTAAAATTAGGGAGATGATCGGTCC GGCGCGAACCGGGAGGTCCC
Downstream 100 bases:
>100_bases GACTCCGGCGCAGGGGGATGGATTCCCTCCTGCGCCTGGAAGCCCATGACTACGGAGGAGGCAGCGGCTGCCAGTTCGGG TCGGGCCAGACGAAGGGGTT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Luxr Family
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSGGTLRSPQVHALVRLINEAHELPARVATRSRHLLVGLCRILGAEAGACVLERDFRPGGHDGFTEIVLEGWSGSAVSAL EALRRMGSACNPAIRSLMERGSEPGTIVTAMRRELVEDWSWYGAPYVEHHLRPTGLDDSVYSSQWSGLPGVVRGIGIYRE RGGRPFDAADRELLHLFHAECGAMFDPPGSSKVGTPSGWLAPRERQTLELLLQGLGDKQIAARLGISRFTVNQYTKTLYR RFGVQSRAALIAQVLARDEPDATTALPSRQVPPDGHPKLARSSDGQDPSRRS
Sequences:
>Translated_292_residues MSGGTLRSPQVHALVRLINEAHELPARVATRSRHLLVGLCRILGAEAGACVLERDFRPGGHDGFTEIVLEGWSGSAVSAL EALRRMGSACNPAIRSLMERGSEPGTIVTAMRRELVEDWSWYGAPYVEHHLRPTGLDDSVYSSQWSGLPGVVRGIGIYRE RGGRPFDAADRELLHLFHAECGAMFDPPGSSKVGTPSGWLAPRERQTLELLLQGLGDKQIAARLGISRFTVNQYTKTLYR RFGVQSRAALIAQVLARDEPDATTALPSRQVPPDGHPKLARSSDGQDPSRRS >Mature_291_residues SGGTLRSPQVHALVRLINEAHELPARVATRSRHLLVGLCRILGAEAGACVLERDFRPGGHDGFTEIVLEGWSGSAVSALE ALRRMGSACNPAIRSLMERGSEPGTIVTAMRRELVEDWSWYGAPYVEHHLRPTGLDDSVYSSQWSGLPGVVRGIGIYRER GGRPFDAADRELLHLFHAECGAMFDPPGSSKVGTPSGWLAPRERQTLELLLQGLGDKQIAARLGISRFTVNQYTKTLYRR FGVQSRAALIAQVLARDEPDATTALPSRQVPPDGHPKLARSSDGQDPSRRS
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31877; Mature: 31745
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGTLRSPQVHALVRLINEAHELPARVATRSRHLLVGLCRILGAEAGACVLERDFRPGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC HDGFTEIVLEGWSGSAVSALEALRRMGSACNPAIRSLMERGSEPGTIVTAMRRELVEDWS CCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH WYGAPYVEHHLRPTGLDDSVYSSQWSGLPGVVRGIGIYRERGGRPFDAADRELLHLFHAE HCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH CGAMFDPPGSSKVGTPSGWLAPRERQTLELLLQGLGDKQIAARLGISRFTVNQYTKTLYR HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHH RFGVQSRAALIAQVLARDEPDATTALPSRQVPPDGHPKLARSSDGQDPSRRS HHCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGGTLRSPQVHALVRLINEAHELPARVATRSRHLLVGLCRILGAEAGACVLERDFRPGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC HDGFTEIVLEGWSGSAVSALEALRRMGSACNPAIRSLMERGSEPGTIVTAMRRELVEDWS CCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH WYGAPYVEHHLRPTGLDDSVYSSQWSGLPGVVRGIGIYRERGGRPFDAADRELLHLFHAE HCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH CGAMFDPPGSSKVGTPSGWLAPRERQTLELLLQGLGDKQIAARLGISRFTVNQYTKTLYR HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHH RFGVQSRAALIAQVLARDEPDATTALPSRQVPPDGHPKLARSSDGQDPSRRS HHCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA